RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 Q6JHZ5 121 aa11.21□□□□□ -0.61
VSX1-206ENST00000444511 HIST3H2BBQ8N257 126 aa11.21□□□□□ -0.61
VSX1-206ENST00000444511 HIST1H2BLQ99880 126 aa11.21□□□□□ -0.61
VSX1-206ENST00000444511 CLEC2BQ92478 149 aa11.19□□□□□ -0.62
VSX1-206ENST00000444511 FSIP2Q5CZC0 6907 aa11.17□□□□□ -0.62
VSX1-206ENST00000444511 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
VSX1-206ENST00000444511 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
VSX1-206ENST00000444511 IGFL1Q6UW32 110 aa11.16□□□□□ -0.62
VSX1-206ENST00000444511 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
VSX1-206ENST00000444511 CRCT1Q9UGL9 99 aa11.16□□□□□ -0.62
VSX1-206ENST00000444511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
VSX1-206ENST00000444511 C12orf57Q99622 126 aa11.14□□□□□ -0.63
VSX1-206ENST00000444511 M0R2T5 61 aa11.13□□□□□ -0.63
VSX1-206ENST00000444511 BVES-AS1Q5T3Y7 98 aa11.13□□□□□ -0.63
VSX1-206ENST00000444511 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
VSX1-206ENST00000444511 KRTAP10-6P60371 365 aaPredicted RBP11.11□□□□□ -0.63
VSX1-206ENST00000444511 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
VSX1-206ENST00000444511 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
VSX1-206ENST00000444511 S100A6P06703 90 aa11.1□□□□□ -0.63
VSX1-206ENST00000444511 LORP23490 312 aaPredicted RBP11.1□□□□□ -0.63
VSX1-206ENST00000444511 OBSCN-AS1Q96MR7 158 aa11.08□□□□□ -0.64
VSX1-206ENST00000444511 SCGB1D1O95968 90 aa11.07□□□□□ -0.64
VSX1-206ENST00000444511 H3BUT2 72 aa11.05□□□□□ -0.64
VSX1-206ENST00000444511 ATP11AUNQ6ZP68 121 aa11.05□□□□□ -0.64
VSX1-206ENST00000444511 LST1O00453 97 aa11.04□□□□□ -0.64
VSX1-206ENST00000444511 COX8AP10176 69 aa11.04□□□□□ -0.64
VSX1-206ENST00000444511 Q75L30 129 aa11.03□□□□□ -0.64
VSX1-206ENST00000444511 SNCGO76070 127 aa11.01□□□□□ -0.65
VSX1-206ENST00000444511 RAB37Q96AX2 223 aa11□□□□□ -0.65
VSX1-206ENST00000444511 DLEU1O43261 78 aa10.99□□□□□ -0.65
VSX1-206ENST00000444511 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
VSX1-206ENST00000444511 CFC1P0CG37 223 aa10.98□□□□□ -0.65
VSX1-206ENST00000444511 Q6Q795 121 aa10.97□□□□□ -0.65
VSX1-206ENST00000444511 Q96NJ1 140 aa10.97□□□□□ -0.65
VSX1-206ENST00000444511 H0YGX0 51 aa10.96□□□□□ -0.65
VSX1-206ENST00000444511 S100A1P23297 94 aa10.96□□□□□ -0.65
VSX1-206ENST00000444511 FLGP20930 4061 aaPredicted RBP10.95□□□□□ -0.66
VSX1-206ENST00000444511 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
VSX1-206ENST00000444511 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
VSX1-206ENST00000444511 TEN1Q86WV5 123 aa10.93□□□□□ -0.66
VSX1-206ENST00000444511 A0A0B4J2C4 111 aa10.92□□□□□ -0.66
VSX1-206ENST00000444511 FAM218AQ96MZ4 157 aa10.92□□□□□ -0.66
VSX1-206ENST00000444511 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
VSX1-206ENST00000444511 A0A087WSZ3 146 aa10.89□□□□□ -0.67
VSX1-206ENST00000444511 PAM16Q9Y3D7 125 aa10.89□□□□□ -0.67
VSX1-206ENST00000444511 GHRHP01286 108 aa10.88□□□□□ -0.67
VSX1-206ENST00000444511 SPATA45Q537H7 98 aa10.88□□□□□ -0.67
VSX1-206ENST00000444511 H3BMG7 143 aa10.87□□□□□ -0.67
VSX1-206ENST00000444511 C20orf166-AS1Q96NR2 134 aa10.87□□□□□ -0.67
VSX1-206ENST00000444511 FABP2P12104 132 aa10.86□□□□□ -0.67
VSX1-206ENST00000444511 A0A1B0GX51 115 aa10.85□□□□□ -0.67
VSX1-206ENST00000444511 C2orf91Q6ZV80 131 aa10.85□□□□□ -0.67
VSX1-206ENST00000444511 A8MUU9 505 aa10.84□□□□□ -0.67
VSX1-206ENST00000444511 VAMP8Q9BV40 100 aa10.84□□□□□ -0.67
VSX1-206ENST00000444511 PRO1854Q9UHT4 67 aa10.83□□□□□ -0.68
VSX1-206ENST00000444511 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
VSX1-206ENST00000444511 A6NJY4 79 aa10.82□□□□□ -0.68
VSX1-206ENST00000444511 CEND1Q8N111 149 aa10.82□□□□□ -0.68
VSX1-206ENST00000444511 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
VSX1-206ENST00000444511 DSCR10P59022 87 aa10.79□□□□□ -0.68
VSX1-206ENST00000444511 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
VSX1-206ENST00000444511 A0A1W2PNM2 257 aa10.77□□□□□ -0.69
VSX1-206ENST00000444511 TRIAP1O43715 76 aa10.76□□□□□ -0.69
VSX1-206ENST00000444511 FXYD2P54710 66 aa10.75□□□□□ -0.69
VSX1-206ENST00000444511 DNAL4O96015 105 aa10.73□□□□□ -0.69
VSX1-206ENST00000444511 ANKRD29Q8N6D5 301 aa10.73□□□□□ -0.69
VSX1-206ENST00000444511 A0A1B0GV72 72 aa10.71□□□□□ -0.69
VSX1-206ENST00000444511 IGKV4-1P06312 121 aa10.71□□□□□ -0.69
VSX1-206ENST00000444511 LINC00313P59037 77 aa10.71□□□□□ -0.69
VSX1-206ENST00000444511 ORMDL1Q9P0S3 153 aa10.71□□□□□ -0.69
VSX1-206ENST00000444511 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
VSX1-206ENST00000444511 H3BQ85 93 aa10.69□□□□□ -0.7
VSX1-206ENST00000444511 PSMB2P49721 201 aa10.68□□□□□ -0.7
VSX1-206ENST00000444511 TMEM256-PLSCR3K7ERE1 68 aa10.65□□□□□ -0.7
VSX1-206ENST00000444511 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
VSX1-206ENST00000444511 HSD52Q0P140 79 aa10.64□□□□□ -0.71
VSX1-206ENST00000444511 KRTAP9-8Q9BYQ0 159 aa10.64□□□□□ -0.71
VSX1-206ENST00000444511 FAM236DA0A1B0GTK5 79 aa10.63□□□□□ -0.71
VSX1-206ENST00000444511 K7ERJ3 54 aa10.63□□□□□ -0.71
VSX1-206ENST00000444511 COX6CP09669 75 aa10.63□□□□□ -0.71
VSX1-206ENST00000444511 FAM236CP0DP71 79 aa10.63□□□□□ -0.71
VSX1-206ENST00000444511 DEFB116Q30KQ4 102 aa10.63□□□□□ -0.71
VSX1-206ENST00000444511 TRACP01848 142 aa10.62□□□□□ -0.71
VSX1-206ENST00000444511 CCKP06307 115 aa10.62□□□□□ -0.71
VSX1-206ENST00000444511 NOTCH2NLQ7Z3S9 236 aa10.6□□□□□ -0.71
VSX1-206ENST00000444511 LINC00472Q9H8W2 130 aa10.6□□□□□ -0.71
VSX1-206ENST00000444511 IGHV6-1A0A0B4J1U7 121 aa10.59□□□□□ -0.71
VSX1-206ENST00000444511 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
VSX1-206ENST00000444511 UBE2V1Q13404 147 aa10.56□□□□□ -0.72
VSX1-206ENST00000444511 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
VSX1-206ENST00000444511 VPS25Q9BRG1 176 aa10.54□□□□□ -0.72
VSX1-206ENST00000444511 HRES1P13985 223 aa10.53□□□□□ -0.72
VSX1-206ENST00000444511 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
VSX1-206ENST00000444511 A0A1B0GVX0 72 aa10.49□□□□□ -0.73
VSX1-206ENST00000444511 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
VSX1-206ENST00000444511 RBM3P98179 157 aaKnown RBP10.49□□□□□ -0.73
VSX1-206ENST00000444511 USH2AO75445 5202 aa10.49□□□□□ -0.73
VSX1-206ENST00000444511 MT2AP02795 61 aa10.48□□□□□ -0.73
VSX1-206ENST00000444511 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
VSX1-206ENST00000444511 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms