RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 Q8NDZ9 215 aa6.93□□□□□ -1.3
TOP3B-210ENST00000444502 PKD1L1Q8TDX9 2849 aa6.93□□□□□ -1.3
TOP3B-210ENST00000444502 A0A087WSZ3 146 aa6.93□□□□□ -1.3
TOP3B-210ENST00000444502 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
TOP3B-210ENST00000444502 PDZD2O15018 2839 aa6.93□□□□□ -1.3
TOP3B-210ENST00000444502 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
TOP3B-210ENST00000444502 APLNQ9ULZ1 77 aa6.92□□□□□ -1.3
TOP3B-210ENST00000444502 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
TOP3B-210ENST00000444502 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
TOP3B-210ENST00000444502 LINC00208Q96KT6 92 aa6.92□□□□□ -1.3
TOP3B-210ENST00000444502 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
TOP3B-210ENST00000444502 A8MU10 97 aa6.9□□□□□ -1.3
TOP3B-210ENST00000444502 hDV103S1A0JD37 113 aa6.9□□□□□ -1.3
TOP3B-210ENST00000444502 LOC110117498A0A087WWA1 95 aa6.9□□□□□ -1.31
TOP3B-210ENST00000444502 ST20-AS1Q8NBB2 130 aa6.9□□□□□ -1.31
TOP3B-210ENST00000444502 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
TOP3B-210ENST00000444502 A0A087WTM6 91 aa6.87□□□□□ -1.31
TOP3B-210ENST00000444502 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
TOP3B-210ENST00000444502 H3BS24 57 aa6.87□□□□□ -1.31
TOP3B-210ENST00000444502 MOBPQ13875 183 aa6.87□□□□□ -1.31
TOP3B-210ENST00000444502 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
TOP3B-210ENST00000444502 Q6ZRX8 168 aa6.84□□□□□ -1.31
TOP3B-210ENST00000444502 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
TOP3B-210ENST00000444502 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
TOP3B-210ENST00000444502 Q1T7F1 81 aa6.83□□□□□ -1.32
TOP3B-210ENST00000444502 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
TOP3B-210ENST00000444502 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
TOP3B-210ENST00000444502 TNP2Q05952 138 aa6.82□□□□□ -1.32
TOP3B-210ENST00000444502 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
TOP3B-210ENST00000444502 SPACA4Q8TDM5 124 aa6.82□□□□□ -1.32
TOP3B-210ENST00000444502 A0A0G2JQZ4 141 aa6.81□□□□□ -1.32
TOP3B-210ENST00000444502 A0A1W2PNN7 141 aa6.81□□□□□ -1.32
TOP3B-210ENST00000444502 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
TOP3B-210ENST00000444502 LINC00476Q8WZB0 136 aa6.81□□□□□ -1.32
TOP3B-210ENST00000444502 LIMD2Q9BT23 127 aa6.81□□□□□ -1.32
TOP3B-210ENST00000444502 RETNLBQ9BQ08 111 aa6.8□□□□□ -1.32
TOP3B-210ENST00000444502 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
TOP3B-210ENST00000444502 SPAG11AQ6PDA7 123 aa6.8□□□□□ -1.32
TOP3B-210ENST00000444502 PCOTHQ58A44 107 aa6.79□□□□□ -1.32
TOP3B-210ENST00000444502 Q8N377 158 aa6.79□□□□□ -1.32
TOP3B-210ENST00000444502 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
TOP3B-210ENST00000444502 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
TOP3B-210ENST00000444502 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
TOP3B-210ENST00000444502 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
TOP3B-210ENST00000444502 Q5VV11 94 aa6.76□□□□□ -1.33
TOP3B-210ENST00000444502 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
TOP3B-210ENST00000444502 KRTAP26-1Q6PEX3 210 aa6.76□□□□□ -1.33
TOP3B-210ENST00000444502 Q8NBF4 154 aa6.76□□□□□ -1.33
TOP3B-210ENST00000444502 K7EQZ3 153 aa6.75□□□□□ -1.33
TOP3B-210ENST00000444502 H0Y9P7 68 aa6.75□□□□□ -1.33
TOP3B-210ENST00000444502 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
TOP3B-210ENST00000444502 PLA2G1BP04054 148 aaKnown RBP6.74□□□□□ -1.33
TOP3B-210ENST00000444502 TLX1NBP0CAT3 122 aa6.73□□□□□ -1.33
TOP3B-210ENST00000444502 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
TOP3B-210ENST00000444502 LCA10Q71F78 164 aa6.73□□□□□ -1.33
TOP3B-210ENST00000444502 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
TOP3B-210ENST00000444502 TGP01266 2768 aa6.72□□□□□ -1.33
TOP3B-210ENST00000444502 RPL37AP61513 92 aaKnown RBP6.72□□□□□ -1.33
TOP3B-210ENST00000444502 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
TOP3B-210ENST00000444502 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
TOP3B-210ENST00000444502 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.34
TOP3B-210ENST00000444502 ZNF469Q96JG9 3925 aaPredicted RBP6.7□□□□□ -1.34
TOP3B-210ENST00000444502 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
TOP3B-210ENST00000444502 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
TOP3B-210ENST00000444502 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
TOP3B-210ENST00000444502 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
TOP3B-210ENST00000444502 COA5Q86WW8 74 aa6.68□□□□□ -1.34
TOP3B-210ENST00000444502 Q8N9P0 234 aaPredicted RBP6.68□□□□□ -1.34
TOP3B-210ENST00000444502 LOC101927531A0A1B0GV80 90 aa6.68□□□□□ -1.34
TOP3B-210ENST00000444502 ZNF861PO60384 105 aa6.67□□□□□ -1.34
TOP3B-210ENST00000444502 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
TOP3B-210ENST00000444502 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
TOP3B-210ENST00000444502 TRRAPQ9Y4A5 3859 aa6.67□□□□□ -1.34
TOP3B-210ENST00000444502 TENM2Q9NT68 2774 aa6.66□□□□□ -1.34
TOP3B-210ENST00000444502 AKAP9Q99996 3911 aa6.66□□□□□ -1.34
TOP3B-210ENST00000444502 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
TOP3B-210ENST00000444502 ANK3Q12955 4377 aaKnown RBP6.63□□□□□ -1.35
TOP3B-210ENST00000444502 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
TOP3B-210ENST00000444502 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
TOP3B-210ENST00000444502 IGLV7-43P04211 117 aa6.62□□□□□ -1.35
TOP3B-210ENST00000444502 IGKV2D-30A0A075B6S6 120 aa6.61□□□□□ -1.35
TOP3B-210ENST00000444502 IGKV2-30P06310 120 aa6.61□□□□□ -1.35
TOP3B-210ENST00000444502 LINC00313P59037 77 aa6.61□□□□□ -1.35
TOP3B-210ENST00000444502 A0A1B0GW54 56 aa6.61□□□□□ -1.35
TOP3B-210ENST00000444502 J3QL48 77 aa6.6□□□□□ -1.35
TOP3B-210ENST00000444502 K7ERS5 55 aa6.59□□□□□ -1.35
TOP3B-210ENST00000444502 DSCR10P59022 87 aa6.59□□□□□ -1.35
TOP3B-210ENST00000444502 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
TOP3B-210ENST00000444502 SPRR1AP35321 89 aa6.58□□□□□ -1.36
TOP3B-210ENST00000444502 Q75L30 129 aa6.58□□□□□ -1.36
TOP3B-210ENST00000444502 SPINK7P58062 85 aa6.57□□□□□ -1.36
TOP3B-210ENST00000444502 A6NN06 94 aa6.57□□□□□ -1.36
TOP3B-210ENST00000444502 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
TOP3B-210ENST00000444502 SPINK1P00995 79 aa6.56□□□□□ -1.36
TOP3B-210ENST00000444502 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
TOP3B-210ENST00000444502 SRRM2Q9UQ35 2752 aaKnown RBP6.56□□□□□ -1.36
TOP3B-210ENST00000444502 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
TOP3B-210ENST00000444502 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
TOP3B-210ENST00000444502 PANO1I0J062 215 aa6.53□□□□□ -1.36
TOP3B-210ENST00000444502 Q96NJ1 140 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms