RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
SMARCA4-204ENST00000444061 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
SMARCA4-204ENST00000444061 STAB2Q8WWQ8 2551 aa9.04□□□□□ -0.96
SMARCA4-204ENST00000444061 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SMARCA4-204ENST00000444061 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
SMARCA4-204ENST00000444061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
SMARCA4-204ENST00000444061 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
SMARCA4-204ENST00000444061 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
SMARCA4-204ENST00000444061 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
SMARCA4-204ENST00000444061 NF1P21359 2839 aa8.99□□□□□ -0.97
SMARCA4-204ENST00000444061 IGLV5-37A0A075B6J1 123 aa8.98□□□□□ -0.97
SMARCA4-204ENST00000444061 LINC00304Q8N9R0 145 aa8.98□□□□□ -0.97
SMARCA4-204ENST00000444061 DCHS2Q6V1P9 2916 aa8.97□□□□□ -0.97
SMARCA4-204ENST00000444061 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
SMARCA4-204ENST00000444061 RELNP78509 3460 aa8.96□□□□□ -0.97
SMARCA4-204ENST00000444061 FBN2P35556 2912 aa8.96□□□□□ -0.97
SMARCA4-204ENST00000444061 SPAG11AQ6PDA7 123 aa8.96□□□□□ -0.98
SMARCA4-204ENST00000444061 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
SMARCA4-204ENST00000444061 ANAPC11Q9NYG5 84 aa8.94□□□□□ -0.98
SMARCA4-204ENST00000444061 Q6ZR54 194 aa8.93□□□□□ -0.98
SMARCA4-204ENST00000444061 SPRR4Q96PI1 79 aa8.92□□□□□ -0.98
SMARCA4-204ENST00000444061 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
SMARCA4-204ENST00000444061 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
SMARCA4-204ENST00000444061 TRBV7-4A0A0J9YYF1 115 aa8.9□□□□□ -0.98
SMARCA4-204ENST00000444061 DMDP11532 3685 aa8.9□□□□□ -0.99
SMARCA4-204ENST00000444061 Q8N377 158 aa8.9□□□□□ -0.99
SMARCA4-204ENST00000444061 LAMA5O15230 3695 aa8.89□□□□□ -0.99
SMARCA4-204ENST00000444061 MXRA5Q9NR99 2828 aa8.89□□□□□ -0.99
SMARCA4-204ENST00000444061 H7BZZ5 65 aa8.89□□□□□ -0.99
SMARCA4-204ENST00000444061 KRTAP26-1Q6PEX3 210 aa8.89□□□□□ -0.99
SMARCA4-204ENST00000444061 KRTAP10-2P60368 255 aa8.87□□□□□ -0.99
SMARCA4-204ENST00000444061 PDZD2O15018 2839 aa8.87□□□□□ -0.99
SMARCA4-204ENST00000444061 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
SMARCA4-204ENST00000444061 LINC00313P59037 77 aa8.86□□□□□ -0.99
SMARCA4-204ENST00000444061 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
SMARCA4-204ENST00000444061 ACYP2P14621 99 aa8.85□□□□□ -0.99
SMARCA4-204ENST00000444061 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
SMARCA4-204ENST00000444061 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
SMARCA4-204ENST00000444061 A0A1B0GU69 56 aa8.81□□□□□ -1
SMARCA4-204ENST00000444061 Q96NJ1 140 aa8.81□□□□□ -1
SMARCA4-204ENST00000444061 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
SMARCA4-204ENST00000444061 IGKV2-30P06310 120 aa8.8□□□□□ -1
SMARCA4-204ENST00000444061 CD164Q04900 197 aa8.8□□□□□ -1
SMARCA4-204ENST00000444061 A0A0G2JQZ4 141 aa8.79□□□□□ -1
SMARCA4-204ENST00000444061 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
SMARCA4-204ENST00000444061 SPINK1P00995 79 aa8.78□□□□□ -1
SMARCA4-204ENST00000444061 PRR26Q8N8Z3 221 aa8.78□□□□□ -1
SMARCA4-204ENST00000444061 ASPMQ8IZT6 3477 aa8.78□□□□□ -1
SMARCA4-204ENST00000444061 A8MUN3 132 aa8.77□□□□□ -1
SMARCA4-204ENST00000444061 C8orf87E5RJ46 101 aa8.77□□□□□ -1
SMARCA4-204ENST00000444061 Q5VSD8 79 aa8.76□□□□□ -1.01
SMARCA4-204ENST00000444061 OTOGQ6ZRI0 2925 aa8.74□□□□□ -1.01
SMARCA4-204ENST00000444061 A8MWP4 228 aa8.74□□□□□ -1.01
SMARCA4-204ENST00000444061 K7EQZ3 153 aa8.73□□□□□ -1.01
SMARCA4-204ENST00000444061 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
SMARCA4-204ENST00000444061 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
SMARCA4-204ENST00000444061 COA5Q86WW8 74 aa8.72□□□□□ -1.01
SMARCA4-204ENST00000444061 Q6ZRN7 208 aaPredicted RBP8.71□□□□□ -1.01
SMARCA4-204ENST00000444061 Q8NDZ9 215 aa8.71□□□□□ -1.01
SMARCA4-204ENST00000444061 C9orf92A6NGG3 77 aa8.71□□□□□ -1.02
SMARCA4-204ENST00000444061 SPRR1AP35321 89 aa8.7□□□□□ -1.02
SMARCA4-204ENST00000444061 IGLV5-48A0A075B6I7 105 aa8.69□□□□□ -1.02
SMARCA4-204ENST00000444061 PRR15Q8IV56 129 aa8.69□□□□□ -1.02
SMARCA4-204ENST00000444061 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SMARCA4-204ENST00000444061 DSCR10P59022 87 aa8.68□□□□□ -1.02
SMARCA4-204ENST00000444061 SPANXA2-OT1Q8N9U9 137 aa8.68□□□□□ -1.02
SMARCA4-204ENST00000444061 A0A1W2PNM2 257 aa8.67□□□□□ -1.02
SMARCA4-204ENST00000444061 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
SMARCA4-204ENST00000444061 PANO1I0J062 215 aa8.66□□□□□ -1.02
SMARCA4-204ENST00000444061 A0A1B0GVX0 72 aa8.65□□□□□ -1.02
SMARCA4-204ENST00000444061 C7orf65Q6ZTY9 151 aa8.65□□□□□ -1.03
SMARCA4-204ENST00000444061 WDFY3Q8IZQ1 3526 aa8.64□□□□□ -1.03
SMARCA4-204ENST00000444061 Q1T7F1 81 aa8.64□□□□□ -1.03
SMARCA4-204ENST00000444061 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
SMARCA4-204ENST00000444061 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
SMARCA4-204ENST00000444061 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
SMARCA4-204ENST00000444061 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
SMARCA4-204ENST00000444061 UQCR11O14957 56 aa8.6□□□□□ -1.03
SMARCA4-204ENST00000444061 LCA10Q71F78 164 aa8.6□□□□□ -1.03
SMARCA4-204ENST00000444061 SMG1Q96Q15 3661 aaKnown RBP8.59□□□□□ -1.03
SMARCA4-204ENST00000444061 Q5XG85 94 aa8.59□□□□□ -1.03
SMARCA4-204ENST00000444061 NBPF19A0A087WUL8 3843 aa8.58□□□□□ -1.04
SMARCA4-204ENST00000444061 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
SMARCA4-204ENST00000444061 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
SMARCA4-204ENST00000444061 SPRR1BP22528 89 aa8.56□□□□□ -1.04
SMARCA4-204ENST00000444061 CDC42SE1Q9NRR8 79 aa8.56□□□□□ -1.04
SMARCA4-204ENST00000444061 ZFHX4Q86UP3 3567 aa8.54□□□□□ -1.04
SMARCA4-204ENST00000444061 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
SMARCA4-204ENST00000444061 MIR22HGQ0VDD5 57 aa8.49□□□□□ -1.05
SMARCA4-204ENST00000444061 TENM2Q9NT68 2774 aa8.48□□□□□ -1.05
SMARCA4-204ENST00000444061 TENM3Q9P273 2699 aa8.48□□□□□ -1.05
SMARCA4-204ENST00000444061 ZFHX3Q15911 3703 aa8.48□□□□□ -1.05
SMARCA4-204ENST00000444061 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.05
SMARCA4-204ENST00000444061 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
SMARCA4-204ENST00000444061 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
SMARCA4-204ENST00000444061 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-204ENST00000444061 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
SMARCA4-204ENST00000444061 Q6ZSA8 131 aa8.43□□□□□ -1.06
SMARCA4-204ENST00000444061 Q75L30 129 aa8.42□□□□□ -1.06
SMARCA4-204ENST00000444061 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms