RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
BRPF3-203ENST00000441123 HELZ2Q9BYK8 2649 aaKnown RBP7.79□□□□□ -1.16
BRPF3-203ENST00000441123 Q5W150 140 aa7.79□□□□□ -1.16
BRPF3-203ENST00000441123 ZNF292O60281 2723 aa7.77□□□□□ -1.17
BRPF3-203ENST00000441123 Q5VV11 94 aa7.77□□□□□ -1.17
BRPF3-203ENST00000441123 OXTP01178 125 aa7.75□□□□□ -1.17
BRPF3-203ENST00000441123 Q6ZR54 194 aa7.75□□□□□ -1.17
BRPF3-203ENST00000441123 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
BRPF3-203ENST00000441123 A0A1B0GU33 70 aa7.74□□□□□ -1.17
BRPF3-203ENST00000441123 M0R2T5 61 aa7.73□□□□□ -1.17
BRPF3-203ENST00000441123 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
BRPF3-203ENST00000441123 STAB1Q9NY15 2570 aa7.68□□□□□ -1.18
BRPF3-203ENST00000441123 MKI67P46013 3256 aaKnown RBP7.66□□□□□ -1.18
BRPF3-203ENST00000441123 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
BRPF3-203ENST00000441123 RANBP2P49792 3224 aaKnown RBP7.66□□□□□ -1.18
BRPF3-203ENST00000441123 LCE6AA0A183 80 aa7.65□□□□□ -1.18
BRPF3-203ENST00000441123 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
BRPF3-203ENST00000441123 CFAP46Q8IYW2 2715 aa7.64□□□□□ -1.19
BRPF3-203ENST00000441123 AKAP13Q12802 2813 aa7.63□□□□□ -1.19
BRPF3-203ENST00000441123 A0A0C4DFX4 3053 aa7.61□□□□□ -1.19
BRPF3-203ENST00000441123 SPINK7P58062 85 aa7.61□□□□□ -1.19
BRPF3-203ENST00000441123 MGAQ8IWI9 3026 aa7.6□□□□□ -1.19
BRPF3-203ENST00000441123 PANO1I0J062 215 aa7.59□□□□□ -1.19
BRPF3-203ENST00000441123 KRTAP10-1P60331 282 aa7.59□□□□□ -1.19
BRPF3-203ENST00000441123 S4R3F8 94 aa7.59□□□□□ -1.19
BRPF3-203ENST00000441123 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
BRPF3-203ENST00000441123 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
BRPF3-203ENST00000441123 KRTAP10-2P60368 255 aa7.56□□□□□ -1.2
BRPF3-203ENST00000441123 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
BRPF3-203ENST00000441123 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
BRPF3-203ENST00000441123 Q5VSD8 79 aa7.54□□□□□ -1.2
BRPF3-203ENST00000441123 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
BRPF3-203ENST00000441123 LAMA3Q16787 3333 aa7.53□□□□□ -1.2
BRPF3-203ENST00000441123 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
BRPF3-203ENST00000441123 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.2
BRPF3-203ENST00000441123 CENPEQ02224 2701 aa7.52□□□□□ -1.21
BRPF3-203ENST00000441123 BRCA2P51587 3418 aa7.51□□□□□ -1.21
BRPF3-203ENST00000441123 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
BRPF3-203ENST00000441123 KRTAP11-1Q8IUC1 163 aa7.5□□□□□ -1.21
BRPF3-203ENST00000441123 TEP1Q99973 2627 aaKnown RBP7.49□□□□□ -1.21
BRPF3-203ENST00000441123 CFAP54Q96N23 3096 aa7.49□□□□□ -1.21
BRPF3-203ENST00000441123 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.21
BRPF3-203ENST00000441123 A0A087X002 238 aa7.46□□□□□ -1.22
BRPF3-203ENST00000441123 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
BRPF3-203ENST00000441123 IGSF10Q6WRI0 2623 aa7.44□□□□□ -1.22
BRPF3-203ENST00000441123 TEX15Q9BXT5 2789 aa7.44□□□□□ -1.22
BRPF3-203ENST00000441123 R4GN34 69 aa7.44□□□□□ -1.22
BRPF3-203ENST00000441123 CHD6Q8TD26 2715 aa7.44□□□□□ -1.22
BRPF3-203ENST00000441123 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
BRPF3-203ENST00000441123 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
BRPF3-203ENST00000441123 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
BRPF3-203ENST00000441123 FLG2Q5D862 2391 aaPredicted RBP7.4□□□□□ -1.22
BRPF3-203ENST00000441123 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.23
BRPF3-203ENST00000441123 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
BRPF3-203ENST00000441123 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
BRPF3-203ENST00000441123 NBEAL1Q6ZS30 2694 aa7.39□□□□□ -1.23
BRPF3-203ENST00000441123 ROMO1P60602 79 aa7.38□□□□□ -1.23
BRPF3-203ENST00000441123 TRIOO75962 3097 aa7.37□□□□□ -1.23
BRPF3-203ENST00000441123 UNC79Q9P2D8 2635 aa7.37□□□□□ -1.23
BRPF3-203ENST00000441123 CDH23Q9H251 3354 aa7.35□□□□□ -1.23
BRPF3-203ENST00000441123 WDFY4Q6ZS81 3184 aa7.34□□□□□ -1.23
BRPF3-203ENST00000441123 UNC80Q8N2C7 3258 aa7.34□□□□□ -1.23
BRPF3-203ENST00000441123 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
BRPF3-203ENST00000441123 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
BRPF3-203ENST00000441123 A6NN06 94 aa7.32□□□□□ -1.24
BRPF3-203ENST00000441123 DSPP15924 2871 aaKnown RBP7.3□□□□□ -1.24
BRPF3-203ENST00000441123 FRYQ5TBA9 3013 aa7.3□□□□□ -1.24
BRPF3-203ENST00000441123 M0QZ58 72 aa7.28□□□□□ -1.24
BRPF3-203ENST00000441123 NOTCH1P46531 2555 aa7.28□□□□□ -1.24
BRPF3-203ENST00000441123 PRUNE2Q8WUY3 3088 aa7.28□□□□□ -1.24
BRPF3-203ENST00000441123 VPS13AQ96RL7 3174 aa7.27□□□□□ -1.25
BRPF3-203ENST00000441123 BAHCC1Q9P281 2608 aa7.23□□□□□ -1.25
BRPF3-203ENST00000441123 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.26
BRPF3-203ENST00000441123 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
BRPF3-203ENST00000441123 NBEAL2Q6ZNJ1 2754 aa7.2□□□□□ -1.26
BRPF3-203ENST00000441123 SZT2Q5T011 3432 aa7.2□□□□□ -1.26
BRPF3-203ENST00000441123 DMBT1Q9UGM3 2413 aaPredicted RBP7.2□□□□□ -1.26
BRPF3-203ENST00000441123 LAMA1P25391 3075 aa7.2□□□□□ -1.26
BRPF3-203ENST00000441123 KRTAP21-3Q3LHN1 58 aa7.19□□□□□ -1.26
BRPF3-203ENST00000441123 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
BRPF3-203ENST00000441123 DNAH14Q0VDD8 3507 aa7.16□□□□□ -1.26
BRPF3-203ENST00000441123 XIRP2A4UGR9 3374 aa7.16□□□□□ -1.26
BRPF3-203ENST00000441123 A8MUU9 505 aa7.16□□□□□ -1.26
BRPF3-203ENST00000441123 ITPR2Q14571 2701 aa7.15□□□□□ -1.27
BRPF3-203ENST00000441123 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
BRPF3-203ENST00000441123 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
BRPF3-203ENST00000441123 UBR5O95071 2799 aaPredicted RBP7.12□□□□□ -1.27
BRPF3-203ENST00000441123 H3BS24 57 aa7.12□□□□□ -1.27
BRPF3-203ENST00000441123 LRBAP50851 2863 aa7.11□□□□□ -1.27
BRPF3-203ENST00000441123 VCANP13611 3396 aa7.11□□□□□ -1.27
BRPF3-203ENST00000441123 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
BRPF3-203ENST00000441123 ITPR1Q14643 2758 aa7.1□□□□□ -1.27
BRPF3-203ENST00000441123 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
BRPF3-203ENST00000441123 KALRNO60229 2985 aa7.1□□□□□ -1.27
BRPF3-203ENST00000441123 UTP20O75691 2785 aaKnown RBP7.09□□□□□ -1.27
BRPF3-203ENST00000441123 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
BRPF3-203ENST00000441123 SPTBN5Q9NRC6 3674 aaKnown RBP7.08□□□□□ -1.28
BRPF3-203ENST00000441123 TNRC18O15417 2968 aaPredicted RBP7.08□□□□□ -1.28
BRPF3-203ENST00000441123 FLNCQ14315 2725 aa7.07□□□□□ -1.28
BRPF3-203ENST00000441123 CELSR3Q9NYQ7 3312 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms