RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LINC01547P58512 204 aaPredicted RBP2.9□□□□□ -1.95
PTPN4-206ENST00000441089 MRPL55Q7Z7F7 128 aaKnown RBP2.9□□□□□ -1.95
PTPN4-206ENST00000441089 NKAPP1Q8N9T2 125 aa2.9□□□□□ -1.95
PTPN4-206ENST00000441089 OR13C6PQ8NH95 151 aa2.9□□□□□ -1.95
PTPN4-206ENST00000441089 SMIM11BQ8TCY0 68 aa2.9□□□□□ -1.95
PTPN4-206ENST00000441089 LINC00474Q9P2X8 69 aa2.9□□□□□ -1.95
PTPN4-206ENST00000441089 PKIGQ9Y2B9 76 aa2.9□□□□□ -1.95
PTPN4-206ENST00000441089 TRAV23DV6A0A075B6W5 121 aa2.89□□□□□ -1.95
PTPN4-206ENST00000441089 H3BUT2 72 aa2.89□□□□□ -1.95
PTPN4-206ENST00000441089 SPRR1AP35321 89 aa2.89□□□□□ -1.95
PTPN4-206ENST00000441089 RPL28P46779 137 aaKnown RBP2.89□□□□□ -1.95
PTPN4-206ENST00000441089 S100A7L2Q5SY68 101 aa2.89□□□□□ -1.95
PTPN4-206ENST00000441089 TMEM126AQ9H061 195 aa2.89□□□□□ -1.95
PTPN4-206ENST00000441089 KRTAP4-16G5E9R7 235 aaPredicted RBP2.88□□□□□ -1.95
PTPN4-206ENST00000441089 ZNF73O43830 326 aaPredicted RBP2.88□□□□□ -1.95
PTPN4-206ENST00000441089 PRR4Q16378 134 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 Q1RN00 199 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 C6orf99Q4VX62 202 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 LBHQ53QV2 105 aaPredicted RBP2.88□□□□□ -1.95
PTPN4-206ENST00000441089 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 KCNQ1DNQ9H478 68 aa2.88□□□□□ -1.95
PTPN4-206ENST00000441089 A0A1B0GV90 55 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 A0A1W2PPM0 123 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 PSMB2P49721 201 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 UBE2BP63146 152 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 CLEC2BQ92478 149 aa2.87□□□□□ -1.95
PTPN4-206ENST00000441089 TCL1BO95988 128 aa2.86□□□□□ -1.95
PTPN4-206ENST00000441089 ELOF1P60002 83 aaKnown RBP2.86□□□□□ -1.95
PTPN4-206ENST00000441089 SVIPQ8NHG7 77 aa2.86□□□□□ -1.95
PTPN4-206ENST00000441089 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
PTPN4-206ENST00000441089 PSORS1C2Q9UIG4 136 aa2.86□□□□□ -1.95
PTPN4-206ENST00000441089 K7EP34 96 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 ERC2-IT1O76042 136 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 SCGB1C2P0DMR2 95 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 COX7BP24311 80 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 PRLHP81277 87 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 LINC00575Q6W349 94 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 SMCR5Q8TEV8 140 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 Q9BRP9 147 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 SPCS1Q9Y6A9 102 aa2.85□□□□□ -1.95
PTPN4-206ENST00000441089 TRBV7-6A0A0J9YX20 115 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 H0YGX0 51 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 LST1O00453 97 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 BCE1O60756 84 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 FABP2P12104 132 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 VAMP3Q15836 100 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 Q6ZRX8 168 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 FAM19A1Q7Z5A9 133 aa2.84□□□□□ -1.95
PTPN4-206ENST00000441089 ETDCA0A1B0GVM5 59 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 H3BMG7 143 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 COX6CP09669 75 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 C1orf137Q5JT78 98 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 PRO0461Q9UI25 63 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 CBY1Q9Y3M2 126 aa2.83□□□□□ -1.96
PTPN4-206ENST00000441089 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 A0A1B0GX51 115 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 hADV29S1A0JD25 119 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 H0Y9J4 135 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 TRACP01848 142 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 IGLV7-43P04211 117 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 UBE2AP49459 152 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 ATXN8Q156A1 80 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 LYRM7Q5U5X0 104 aa2.82□□□□□ -1.96
PTPN4-206ENST00000441089 C9JAW5 83 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 ZNF861PO60384 105 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 UBE2V1Q13404 147 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 Q6ZQY7 126 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 HIGD2AQ9BW72 106 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 DHRS4-AS1Q9P1J3 65 aa2.81□□□□□ -1.96
PTPN4-206ENST00000441089 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
PTPN4-206ENST00000441089 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.8□□□□□ -1.96
PTPN4-206ENST00000441089 GTF2H5Q6ZYL4 71 aa2.8□□□□□ -1.96
PTPN4-206ENST00000441089 SMIM29Q86T20 159 aa2.8□□□□□ -1.96
PTPN4-206ENST00000441089 Q8N377 158 aa2.8□□□□□ -1.96
PTPN4-206ENST00000441089 SLC25A20O43772 301 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 DNAL4O96015 105 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 SPRR1BP22528 89 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 C3orf22Q8N5N4 141 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 DEFB105AQ8NG35 78 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 ANAPC11Q9NYG5 84 aa2.79□□□□□ -1.96
PTPN4-206ENST00000441089 H3BT86 120 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 CRYGAP11844 174 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 LINC00483Q53H64 154 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 GAGE2AQ6NT46 116 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 ANKRD29Q8N6D5 301 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 ORMDL1Q9P0S3 153 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 SSPOA2VEC9 5147 aa2.78□□□□□ -1.96
PTPN4-206ENST00000441089 MUC17Q685J3 4493 aa2.78□□□□□ -1.97
PTPN4-206ENST00000441089 TEX49A0A1B0GTD5 131 aa2.77□□□□□ -1.97
PTPN4-206ENST00000441089 F8W1H4 67 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms