RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 DEFB110Q30KQ9 67 aa1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 DEFB109BQ30KR1 87 aa1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 UBE2DNLQ8IWF7 75 aa1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 DEFB105AQ8NG35 78 aa1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
PGBD4P3-201ENST00000440731 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB130BP0DP73 79 aa1.15□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB130AP0DP74 79 aa1.15□□□□□ -2.23
PGBD4P3-201ENST00000440731 SPINK13Q1W4C9 94 aa1.15□□□□□ -2.23
PGBD4P3-201ENST00000440731 H3BUA1 57 aa1.14□□□□□ -2.23
PGBD4P3-201ENST00000440731 SPRR1AP35321 89 aa1.14□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB123Q8N688 67 aa1.14□□□□□ -2.23
PGBD4P3-201ENST00000440731 C10orf95Q9H7T3 257 aa1.14□□□□□ -2.23
PGBD4P3-201ENST00000440731 LYNX1P0DP58 116 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB1P60022 68 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 UNQ6190/PRO20217Q6UXQ8 127 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 RHPN1-AS1Q9BWJ2 59 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 TRANK1O15050 2925 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 FBN3Q75N90 2809 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 IGF2RP11717 2491 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 A0A0C4DFX4 3053 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 WNK1Q9H4A3 2382 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 COL6A6A6NMZ7 2263 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 WNK2Q9Y3S1 2297 aa1.13□□□□□ -2.23
PGBD4P3-201ENST00000440731 FLG2Q5D862 2391 aaPredicted RBP1.12□□□□□ -2.23
PGBD4P3-201ENST00000440731 LELP1Q5T871 98 aa1.12□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB108BQ8NET1 73 aa1.12□□□□□ -2.23
PGBD4P3-201ENST00000440731 K7EIL1 84 aa1.11□□□□□ -2.23
PGBD4P3-201ENST00000440731 SPRR1BP22528 89 aa1.11□□□□□ -2.23
PGBD4P3-201ENST00000440731 PIEZO2Q9H5I5 2752 aa1.1□□□□□ -2.23
PGBD4P3-201ENST00000440731 FN1P02751 2386 aaKnown RBP1.1□□□□□ -2.23
PGBD4P3-201ENST00000440731 SPTBN1Q01082 2364 aaKnown RBP1.1□□□□□ -2.23
PGBD4P3-201ENST00000440731 PRLHP81277 87 aa1.1□□□□□ -2.23
PGBD4P3-201ENST00000440731 ZDBF2Q9HCK1 2354 aa1.1□□□□□ -2.23
PGBD4P3-201ENST00000440731 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.23
PGBD4P3-201ENST00000440731 H3BUX3 64 aa1.09□□□□□ -2.23
PGBD4P3-201ENST00000440731 HTN1P15515 57 aa1.09□□□□□ -2.23
PGBD4P3-201ENST00000440731 CD52P31358 61 aa1.09□□□□□ -2.23
PGBD4P3-201ENST00000440731 DEFB119Q8N690 84 aa1.09□□□□□ -2.23
PGBD4P3-201ENST00000440731 PCNX1Q96RV3 2341 aa1.08□□□□□ -2.24
PGBD4P3-201ENST00000440731 KRTAP21-3Q3LHN1 58 aa1.08□□□□□ -2.24
PGBD4P3-201ENST00000440731 Q9Y3F1 56 aa1.08□□□□□ -2.24
PGBD4P3-201ENST00000440731 FAM208BQ5VWN6 2430 aa1.08□□□□□ -2.24
PGBD4P3-201ENST00000440731 SPINK1P00995 79 aa1.07□□□□□ -2.24
PGBD4P3-201ENST00000440731 APLNQ9ULZ1 77 aa1.07□□□□□ -2.24
PGBD4P3-201ENST00000440731 S4R3F8 94 aa1.07□□□□□ -2.24
PGBD4P3-201ENST00000440731 NOTCH1P46531 2555 aa1.06□□□□□ -2.24
PGBD4P3-201ENST00000440731 NOP10Q9NPE3 64 aaKnown RBP1.06□□□□□ -2.24
PGBD4P3-201ENST00000440731 TEP1Q99973 2627 aaKnown RBP1.06□□□□□ -2.24
PGBD4P3-201ENST00000440731 SPTA1P02549 2419 aa1.06□□□□□ -2.24
PGBD4P3-201ENST00000440731 HELZ2Q9BYK8 2649 aaKnown RBP1.05□□□□□ -2.24
PGBD4P3-201ENST00000440731 AKAP6Q13023 2319 aa1.05□□□□□ -2.24
PGBD4P3-201ENST00000440731 JMJD1CQ15652 2540 aa1.05□□□□□ -2.24
PGBD4P3-201ENST00000440731 PTPRZ1P23471 2315 aaPredicted RBP1.05□□□□□ -2.24
PGBD4P3-201ENST00000440731 PKDREJQ9NTG1 2253 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 ACACAQ13085 2346 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 MGAQ8IWI9 3026 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 Q5VSD8 79 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 PRO0255Q9UI72 69 aa1.04□□□□□ -2.24
PGBD4P3-201ENST00000440731 DEFB136Q30KP8 78 aa1.03□□□□□ -2.24
PGBD4P3-201ENST00000440731 WDR87Q6ZQQ6 2873 aa1.03□□□□□ -2.24
PGBD4P3-201ENST00000440731 SPTBN2O15020 2390 aa1.03□□□□□ -2.25
PGBD4P3-201ENST00000440731 GVINP1Q7Z2Y8 2422 aa1.03□□□□□ -2.25
PGBD4P3-201ENST00000440731 CHD8Q9HCK8 2581 aa1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 CHD7Q9P2D1 2997 aa1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 A0A0D9SG42 100 aa1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 DSPP15924 2871 aaKnown RBP1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 PTPN13Q12923 2485 aa1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 CEP250Q9BV73 2442 aa1.02□□□□□ -2.25
PGBD4P3-201ENST00000440731 ABCA2Q9BZC7 2435 aa1.01□□□□□ -2.25
PGBD4P3-201ENST00000440731 CACNA1HO95180 2353 aa1.01□□□□□ -2.25
PGBD4P3-201ENST00000440731 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
PGBD4P3-201ENST00000440731 ROS1P08922 2347 aa1□□□□□ -2.25
PGBD4P3-201ENST00000440731 SPTBN4Q9H254 2564 aa1□□□□□ -2.25
PGBD4P3-201ENST00000440731 REV3LO60673 3130 aa0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 DEFB133Q30KQ1 61 aa0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 MAP1BP46821 2468 aaKnown RBP0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 CHD6Q8TD26 2715 aa0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 OTOGQ6ZRI0 2925 aa0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
PGBD4P3-201ENST00000440731 NCOR1O75376 2440 aa0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 SETXQ7Z333 2677 aaKnown RBP0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 USP9XQ93008 2570 aaPredicted RBP0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 A0A096LNI7 61 aa0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 TENM2Q9NT68 2774 aa0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 CREBBPQ92793 2442 aa0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 C2CD3Q4AC94 2353 aa0.98□□□□□ -2.25
PGBD4P3-201ENST00000440731 NCOR2Q9Y618 2525 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 CEP350Q5VT06 3117 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 A0A096LPF7 62 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 M0QZ58 72 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 DEFB124Q8NES8 71 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 UBR5O95071 2799 aaPredicted RBP0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 SRCAPQ6ZRS2 3230 aa0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
PGBD4P3-201ENST00000440731 UBR4Q5T4S7 5183 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms