RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 JMJD1CQ15652 2540 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 TRBV7-4A0A0J9YYF1 115 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 ETDCA0A1B0GVM5 59 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 ATOX1O00244 68 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 PSCAO43653 123 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 HIST1H4AP62805 103 aaKnown RBP2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 C3orf22Q8N5N4 141 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 HIVEP1P15822 2718 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 CUBNO60494 3623 aa2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 NSD1Q96L73 2696 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P11-201ENST00000440127 SETD2Q9BYW2 2564 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 A0A087WVE0 104 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 M0R2N4 97 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 UQCRQO14949 82 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 COX7CP15954 63 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 SPRR1AP35321 89 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 CNBPP62633 177 aaKnown RBP2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 HAMPP81172 84 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 Q6ZRX8 168 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 FAM19A5Q7Z5A7 132 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 KRTAP11-1Q8IUC1 163 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 PKIGQ9Y2B9 76 aa2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 TEP1Q99973 2627 aaKnown RBP2.12□□□□□ -2.07
HMGB3P11-201ENST00000440127 A0A096LNI7 61 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 NBDYA0A0U1RRE5 68 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 A0A1B0GW54 56 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 NUPR2A6NF83 97 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 C16orf90A8MZG2 172 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 C9orf153Q5TBE3 101 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 FAM19A1Q7Z5A9 133 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 SERP2Q8N6R1 65 aa2.11□□□□□ -2.07
HMGB3P11-201ENST00000440127 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 IGLV5-48A0A075B6I7 105 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 BCE1O60756 84 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 CRYGAP11844 174 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 UBE2BP63146 152 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 NREPQ16612 68 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 ST20-AS1Q8NBB2 130 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 Q9BRP9 147 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 SS18L2Q9UHA2 77 aa2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 NIPBLQ6KC79 2804 aaeCLIP2.1□□□□□ -2.07
HMGB3P11-201ENST00000440127 NBEAL2Q6ZNJ1 2754 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 LRCOL1A6NCL2 159 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 ERC2-IT1O76042 136 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 FUSP35637 526 aaKnown RBP eCLIP2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 C1orf137Q5JT78 98 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 SMIM20Q8N5G0 67 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 C9orf163Q8N9P6 203 aa2.09□□□□□ -2.07
HMGB3P11-201ENST00000440127 ATRQ13535 2644 aa2.09□□□□□ -2.08
HMGB3P11-201ENST00000440127 F8P00451 2351 aa2.09□□□□□ -2.08
HMGB3P11-201ENST00000440127 VWFP04275 2813 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A1W2PNM2 257 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 F8WEM9 126 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 C3orf84H3BNL1 204 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 BPY2O14599 106 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 PRLHP81277 87 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 SCXQ7RTU7 201 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 DPH3Q96FX2 82 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 LINC00474Q9P2X8 69 aa2.08□□□□□ -2.08
HMGB3P11-201ENST00000440127 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 ZNF861PO60384 105 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 SPRR1BP22528 89 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 UBE2AP49459 152 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 Q6ZRN7 208 aaPredicted RBP2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 SPRR4Q96PI1 79 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 HIGD2AQ9BW72 106 aa2.07□□□□□ -2.08
HMGB3P11-201ENST00000440127 FBN1P35555 2871 aaKnown RBP2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A087WTM6 91 aa2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 PANO1I0J062 215 aa2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 IGKV4-1P06312 121 aa2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 TMEM258P61165 79 aa2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 C5orf47Q569G3 176 aa2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P11-201ENST00000440127 RPS28P62857 69 aaKnown RBP2.05□□□□□ -2.08
HMGB3P11-201ENST00000440127 IGFL1Q6UW32 110 aa2.05□□□□□ -2.08
HMGB3P11-201ENST00000440127 C20orf197Q8N268 126 aa2.05□□□□□ -2.08
HMGB3P11-201ENST00000440127 Q8N9L7 120 aa2.05□□□□□ -2.08
HMGB3P11-201ENST00000440127 BAHCC1Q9P281 2608 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A1B0GVX0 72 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 KLKP1Q107X0 134 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 SPACA4Q8TDM5 124 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 CYSTM1Q9H1C7 97 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 MAST4O15021 2626 aa2.04□□□□□ -2.08
HMGB3P11-201ENST00000440127 TENM3Q9P273 2699 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A087WSZ3 146 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 A0A0U1RQV1 116 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 J3KT08 172 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 PSPHP1O15172 72 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 NDUFC1O43677 76 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 KRTAP13-1Q8IUC0 172 aa2.03□□□□□ -2.08
HMGB3P11-201ENST00000440127 ZNF706Q9Y5V0 76 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms