RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LIMD2Q9BT23 127 aa13.22□□□□□ -0.29
VARS-217ENST00000440048 MUC17Q685J3 4493 aa13.19□□□□□ -0.3
VARS-217ENST00000440048 A0A0G2JQZ4 141 aa13.19□□□□□ -0.3
VARS-217ENST00000440048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.17□□□□□ -0.3
VARS-217ENST00000440048 TMEM238LA0A1B0GVL6 79 aa13.15□□□□□ -0.3
VARS-217ENST00000440048 A6NJY4 79 aa13.15□□□□□ -0.3
VARS-217ENST00000440048 F8WEM9 126 aa13.15□□□□□ -0.3
VARS-217ENST00000440048 FXYD2P54710 66 aa13.15□□□□□ -0.3
VARS-217ENST00000440048 PRO1854Q9UHT4 67 aa13.12□□□□□ -0.31
VARS-217ENST00000440048 H0YGX0 51 aa13.11□□□□□ -0.31
VARS-217ENST00000440048 Q5XG85 94 aa13.1□□□□□ -0.31
VARS-217ENST00000440048 HSD52Q0P140 79 aa13.09□□□□□ -0.31
VARS-217ENST00000440048 PPDPFLQ8WWR9 84 aa13.09□□□□□ -0.31
VARS-217ENST00000440048 IGLV8-61A0A075B6I0 122 aa13.08□□□□□ -0.32
VARS-217ENST00000440048 FAM218AQ96MZ4 157 aa13.08□□□□□ -0.32
VARS-217ENST00000440048 OCIAD2Q56VL3 154 aa13.06□□□□□ -0.32
VARS-217ENST00000440048 Q6JHZ5 121 aa13.06□□□□□ -0.32
VARS-217ENST00000440048 SNCGO76070 127 aa13.05□□□□□ -0.32
VARS-217ENST00000440048 SNHG12Q9BXW3 62 aa13.05□□□□□ -0.32
VARS-217ENST00000440048 UQCR10Q9UDW1 63 aa13.05□□□□□ -0.32
VARS-217ENST00000440048 C1orf195Q5TG92 126 aa13.03□□□□□ -0.32
VARS-217ENST00000440048 IGFL1Q6UW32 110 aa13.03□□□□□ -0.32
VARS-217ENST00000440048 ASB16-AS1Q495Z4 193 aa13.02□□□□□ -0.33
VARS-217ENST00000440048 CLEC2BQ92478 149 aa13.02□□□□□ -0.33
VARS-217ENST00000440048 TRIAP1O43715 76 aa13.01□□□□□ -0.33
VARS-217ENST00000440048 XP32Q5T750 250 aa13.01□□□□□ -0.33
VARS-217ENST00000440048 K7ERJ3 54 aa12.99□□□□□ -0.33
VARS-217ENST00000440048 TCL1BO95988 128 aa12.99□□□□□ -0.33
VARS-217ENST00000440048 A0A1B0GX51 115 aa12.98□□□□□ -0.33
VARS-217ENST00000440048 H3BUT2 72 aa12.97□□□□□ -0.33
VARS-217ENST00000440048 SEC61BP60468 96 aaKnown RBP12.97□□□□□ -0.33
VARS-217ENST00000440048 TRBV7-7A0A0K0K1E9 115 aa12.95□□□□□ -0.34
VARS-217ENST00000440048 C9orf92A6NGG3 77 aa12.95□□□□□ -0.34
VARS-217ENST00000440048 PSMB2P49721 201 aa12.92□□□□□ -0.34
VARS-217ENST00000440048 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
VARS-217ENST00000440048 FAT4Q6V0I7 4981 aa12.91□□□□□ -0.34
VARS-217ENST00000440048 GHRHP01286 108 aa12.89□□□□□ -0.35
VARS-217ENST00000440048 FABP2P12104 132 aa12.88□□□□□ -0.35
VARS-217ENST00000440048 KRTAP4-1Q9BYQ7 146 aa12.87□□□□□ -0.35
VARS-217ENST00000440048 COX6CP09669 75 aa12.86□□□□□ -0.35
VARS-217ENST00000440048 H3BMG7 143 aa12.84□□□□□ -0.35
VARS-217ENST00000440048 DNAL4O96015 105 aa12.84□□□□□ -0.35
VARS-217ENST00000440048 LCE2AQ5TA79 106 aaPredicted RBP12.84□□□□□ -0.35
VARS-217ENST00000440048 Q6Q795 121 aa12.82□□□□□ -0.36
VARS-217ENST00000440048 ORMDL1Q9P0S3 153 aa12.82□□□□□ -0.36
VARS-217ENST00000440048 TEN1Q86WV5 123 aa12.8□□□□□ -0.36
VARS-217ENST00000440048 SMIM6P0DI80 62 aa12.79□□□□□ -0.36
VARS-217ENST00000440048 H3BQ85 93 aa12.78□□□□□ -0.36
VARS-217ENST00000440048 LST1O00453 97 aa12.77□□□□□ -0.37
VARS-217ENST00000440048 PCOTHQ58A44 107 aa12.77□□□□□ -0.37
VARS-217ENST00000440048 SCGB1C2P0DMR2 95 aa12.75□□□□□ -0.37
VARS-217ENST00000440048 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
VARS-217ENST00000440048 TMEM256-PLSCR3K7ERE1 68 aa12.74□□□□□ -0.37
VARS-217ENST00000440048 A0A087WSZ3 146 aa12.72□□□□□ -0.37
VARS-217ENST00000440048 M0R143 59 aa12.72□□□□□ -0.37
VARS-217ENST00000440048 TRACP01848 142 aa12.72□□□□□ -0.37
VARS-217ENST00000440048 A0A1B0GV72 72 aa12.71□□□□□ -0.37
VARS-217ENST00000440048 A0A1W2PNM2 257 aa12.71□□□□□ -0.37
VARS-217ENST00000440048 RPL37P61927 97 aaKnown RBP12.7□□□□□ -0.38
VARS-217ENST00000440048 ANKRD29Q8N6D5 301 aa12.7□□□□□ -0.38
VARS-217ENST00000440048 UBE2V1Q13404 147 aa12.67□□□□□ -0.38
VARS-217ENST00000440048 OBSCN-AS1Q96MR7 158 aa12.64□□□□□ -0.39
VARS-217ENST00000440048 LOC105371267A0A1B0GV96 52 aa12.63□□□□□ -0.39
VARS-217ENST00000440048 Q96NJ1 140 aa12.63□□□□□ -0.39
VARS-217ENST00000440048 TRBV7-4A0A0J9YYF1 115 aa12.62□□□□□ -0.39
VARS-217ENST00000440048 NAA38Q9BRA0 125 aaKnown RBP12.62□□□□□ -0.39
VARS-217ENST00000440048 TSTD3H0UI37 97 aa12.6□□□□□ -0.39
VARS-217ENST00000440048 CCKP06307 115 aa12.58□□□□□ -0.4
VARS-217ENST00000440048 BAALC-AS2P0C853 105 aa12.58□□□□□ -0.4
VARS-217ENST00000440048 KRTAP9-2Q9BYQ4 174 aa12.58□□□□□ -0.4
VARS-217ENST00000440048 RBM3P98179 157 aaKnown RBP12.55□□□□□ -0.4
VARS-217ENST00000440048 ATXN8Q156A1 80 aa12.54□□□□□ -0.4
VARS-217ENST00000440048 Q75L30 129 aa12.53□□□□□ -0.4
VARS-217ENST00000440048 BATFQ16520 125 aa12.51□□□□□ -0.41
VARS-217ENST00000440048 KRTAP19-2Q3LHN2 52 aa12.51□□□□□ -0.41
VARS-217ENST00000440048 SIGMAR1Q99720 223 aa12.51□□□□□ -0.41
VARS-217ENST00000440048 LCE2CQ5TA81 110 aa12.5□□□□□ -0.41
VARS-217ENST00000440048 DSCR8Q96T75 97 aa12.5□□□□□ -0.41
VARS-217ENST00000440048 VPS25Q9BRG1 176 aa12.49□□□□□ -0.41
VARS-217ENST00000440048 IGKV4-1P06312 121 aa12.48□□□□□ -0.41
VARS-217ENST00000440048 LINC00472Q9H8W2 130 aa12.47□□□□□ -0.41
VARS-217ENST00000440048 DSCR10P59022 87 aa12.46□□□□□ -0.41
VARS-217ENST00000440048 ATP11AUNQ6ZP68 121 aa12.46□□□□□ -0.41
VARS-217ENST00000440048 C20orf166-AS1Q96NR2 134 aa12.45□□□□□ -0.42
VARS-217ENST00000440048 C9JAW5 83 aa12.44□□□□□ -0.42
VARS-217ENST00000440048 DEFB116Q30KQ4 102 aa12.44□□□□□ -0.42
VARS-217ENST00000440048 LYRM7Q5U5X0 104 aa12.44□□□□□ -0.42
VARS-217ENST00000440048 A8MUU9 505 aa12.42□□□□□ -0.42
VARS-217ENST00000440048 TRBV20-1A0A075B6N2 111 aa12.4□□□□□ -0.42
VARS-217ENST00000440048 JMJD7-PLA2G4BH0Y9G9 81 aa12.39□□□□□ -0.43
VARS-217ENST00000440048 LINC00313P59037 77 aa12.39□□□□□ -0.43
VARS-217ENST00000440048 C9orf118A6NHY6 69 aa12.36□□□□□ -0.43
VARS-217ENST00000440048 TAX1BP3O14907 124 aa12.35□□□□□ -0.43
VARS-217ENST00000440048 Q6ZQT0 140 aa12.35□□□□□ -0.43
VARS-217ENST00000440048 NOTCH2NLQ7Z3S9 236 aa12.35□□□□□ -0.43
VARS-217ENST00000440048 C21orf62-AS1Q17RA5 79 aa12.34□□□□□ -0.43
VARS-217ENST00000440048 LOC110117498A0A087WWA1 95 aa12.33□□□□□ -0.44
VARS-217ENST00000440048 KRTAP16-1A8MUX0 517 aa12.33□□□□□ -0.44
VARS-217ENST00000440048 MT1HP80294 61 aa12.33□□□□□ -0.44
VARS-217ENST00000440048 IGHV6-1A0A0B4J1U7 121 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms