RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.2
SMPD4-209ENST00000439886 ZNF706Q9Y5V0 76 aaPredicted RBP7.59□□□□□ -1.2
SMPD4-209ENST00000439886 NOTCH1P46531 2555 aa7.58□□□□□ -1.2
SMPD4-209ENST00000439886 DSCR10P59022 87 aa7.58□□□□□ -1.2
SMPD4-209ENST00000439886 TENM1Q9UKZ4 2725 aa7.57□□□□□ -1.2
SMPD4-209ENST00000439886 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
SMPD4-209ENST00000439886 Q6ZRX8 168 aa7.57□□□□□ -1.2
SMPD4-209ENST00000439886 Q9BRP9 147 aa7.57□□□□□ -1.2
SMPD4-209ENST00000439886 PRLHP81277 87 aa7.56□□□□□ -1.2
SMPD4-209ENST00000439886 H0Y9J4 135 aa7.56□□□□□ -1.2
SMPD4-209ENST00000439886 NDUFB1O75438 58 aa7.55□□□□□ -1.2
SMPD4-209ENST00000439886 LINC00476Q8WZB0 136 aa7.55□□□□□ -1.2
SMPD4-209ENST00000439886 KCNQ1DNQ9H478 68 aa7.55□□□□□ -1.2
SMPD4-209ENST00000439886 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 MAST4O15021 2626 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 H0Y9P7 68 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 PCOTHQ58A44 107 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
SMPD4-209ENST00000439886 Q75L30 129 aa7.53□□□□□ -1.2
SMPD4-209ENST00000439886 DEFB131BA0A096LNP1 70 aa7.53□□□□□ -1.2
SMPD4-209ENST00000439886 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
SMPD4-209ENST00000439886 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
SMPD4-209ENST00000439886 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
SMPD4-209ENST00000439886 CASC10Q5T4H9 136 aa7.51□□□□□ -1.21
SMPD4-209ENST00000439886 SPAG11AQ6PDA7 123 aa7.5□□□□□ -1.21
SMPD4-209ENST00000439886 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 REG3GQ6UW15 175 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 INAFM1C9JVW0 142 aa7.48□□□□□ -1.21
SMPD4-209ENST00000439886 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.21
SMPD4-209ENST00000439886 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.21
SMPD4-209ENST00000439886 KRTAP1-1Q07627 177 aa7.45□□□□□ -1.22
SMPD4-209ENST00000439886 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
SMPD4-209ENST00000439886 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
SMPD4-209ENST00000439886 STAB1Q9NY15 2570 aa7.44□□□□□ -1.22
SMPD4-209ENST00000439886 SPINK7P58062 85 aa7.44□□□□□ -1.22
SMPD4-209ENST00000439886 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
SMPD4-209ENST00000439886 TRRAPQ9Y4A5 3859 aa7.42□□□□□ -1.22
SMPD4-209ENST00000439886 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
SMPD4-209ENST00000439886 COA5Q86WW8 74 aa7.41□□□□□ -1.22
SMPD4-209ENST00000439886 TNP2Q05952 138 aa7.4□□□□□ -1.22
SMPD4-209ENST00000439886 A0A1B0GW54 56 aa7.4□□□□□ -1.23
SMPD4-209ENST00000439886 FBN1P35555 2871 aaKnown RBP7.38□□□□□ -1.23
SMPD4-209ENST00000439886 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
SMPD4-209ENST00000439886 LCE6AA0A183 80 aa7.37□□□□□ -1.23
SMPD4-209ENST00000439886 MGAM2Q2M2H8 2515 aa7.36□□□□□ -1.23
SMPD4-209ENST00000439886 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
SMPD4-209ENST00000439886 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
SMPD4-209ENST00000439886 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
SMPD4-209ENST00000439886 CDK2AP2O75956 126 aa7.34□□□□□ -1.23
SMPD4-209ENST00000439886 CNBPP62633 177 aaKnown RBP7.33□□□□□ -1.24
SMPD4-209ENST00000439886 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
SMPD4-209ENST00000439886 SPRR1AP35321 89 aa7.33□□□□□ -1.24
SMPD4-209ENST00000439886 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
SMPD4-209ENST00000439886 C1orf134Q5TEV5 83 aa7.32□□□□□ -1.24
SMPD4-209ENST00000439886 A0A0A0MQY5 61 aa7.31□□□□□ -1.24
SMPD4-209ENST00000439886 A8MWP4 228 aa7.31□□□□□ -1.24
SMPD4-209ENST00000439886 UBE2DNLQ8IWF7 75 aa7.31□□□□□ -1.24
SMPD4-209ENST00000439886 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
SMPD4-209ENST00000439886 H3BNG1 76 aa7.3□□□□□ -1.24
SMPD4-209ENST00000439886 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
SMPD4-209ENST00000439886 PLA2G1BP04054 148 aaKnown RBP7.29□□□□□ -1.24
SMPD4-209ENST00000439886 TLX1NBP0CAT3 122 aa7.29□□□□□ -1.24
SMPD4-209ENST00000439886 KRTAP10-11P60412 298 aa7.29□□□□□ -1.24
SMPD4-209ENST00000439886 DNAH10OSP0CZ25 163 aa7.29□□□□□ -1.24
SMPD4-209ENST00000439886 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
SMPD4-209ENST00000439886 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
SMPD4-209ENST00000439886 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
SMPD4-209ENST00000439886 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
SMPD4-209ENST00000439886 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
SMPD4-209ENST00000439886 H3BPC8 53 aa7.25□□□□□ -1.25
SMPD4-209ENST00000439886 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
SMPD4-209ENST00000439886 ANK3Q12955 4377 aaKnown RBP7.22□□□□□ -1.25
SMPD4-209ENST00000439886 TENM2Q9NT68 2774 aa7.22□□□□□ -1.25
SMPD4-209ENST00000439886 IGLV7-46A0A075B6I9 117 aa7.21□□□□□ -1.25
SMPD4-209ENST00000439886 MMP24-AS1A0A0U1RRL7 71 aa7.21□□□□□ -1.25
SMPD4-209ENST00000439886 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.25
SMPD4-209ENST00000439886 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
SMPD4-209ENST00000439886 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
SMPD4-209ENST00000439886 ANAPC11Q9NYG5 84 aa7.2□□□□□ -1.26
SMPD4-209ENST00000439886 STAB2Q8WWQ8 2551 aa7.2□□□□□ -1.26
SMPD4-209ENST00000439886 Q6ZR54 194 aa7.2□□□□□ -1.26
SMPD4-209ENST00000439886 C8orf17Q9NRJ1 99 aa7.17□□□□□ -1.26
SMPD4-209ENST00000439886 HRES1P13985 223 aa7.17□□□□□ -1.26
SMPD4-209ENST00000439886 K7EIL1 84 aa7.16□□□□□ -1.26
SMPD4-209ENST00000439886 TP53AIP1Q9HCN2 124 aa7.14□□□□□ -1.27
SMPD4-209ENST00000439886 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
SMPD4-209ENST00000439886 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
SMPD4-209ENST00000439886 RTL8CO15255 209 aa7.12□□□□□ -1.27
SMPD4-209ENST00000439886 ROMO1P60602 79 aa7.11□□□□□ -1.27
SMPD4-209ENST00000439886 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
SMPD4-209ENST00000439886 A0A087X002 238 aa7.11□□□□□ -1.27
SMPD4-209ENST00000439886 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
SMPD4-209ENST00000439886 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
SMPD4-209ENST00000439886 CIRBP-AS1Q8TBR5 109 aa7.09□□□□□ -1.27
SMPD4-209ENST00000439886 PLAC8Q9NZF1 115 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms