RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 Q8N377 158 aa10.27□□□□□ -0.77
DHFR-201ENST00000439211 Q75L30 129 aa10.27□□□□□ -0.77
DHFR-201ENST00000439211 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
DHFR-201ENST00000439211 A6NN06 94 aa10.26□□□□□ -0.77
DHFR-201ENST00000439211 DSCR10P59022 87 aa10.26□□□□□ -0.77
DHFR-201ENST00000439211 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
DHFR-201ENST00000439211 OTOGQ6ZRI0 2925 aa10.26□□□□□ -0.77
DHFR-201ENST00000439211 H0Y9J4 135 aa10.25□□□□□ -0.77
DHFR-201ENST00000439211 C15orf56Q8N910 161 aa10.25□□□□□ -0.77
DHFR-201ENST00000439211 A0A087WSZ3 146 aa10.24□□□□□ -0.77
DHFR-201ENST00000439211 MOBPQ13875 183 aa10.24□□□□□ -0.77
DHFR-201ENST00000439211 C7orf33Q8WU49 177 aa10.24□□□□□ -0.77
DHFR-201ENST00000439211 DHRS4-AS1Q9P1J3 65 aa10.24□□□□□ -0.77
DHFR-201ENST00000439211 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
DHFR-201ENST00000439211 A0A096LNI7 61 aa10.23□□□□□ -0.77
DHFR-201ENST00000439211 A0A0G2JQZ4 141 aa10.21□□□□□ -0.78
DHFR-201ENST00000439211 A0A1W2PNN7 141 aa10.21□□□□□ -0.78
DHFR-201ENST00000439211 A0A1B0GW54 56 aa10.2□□□□□ -0.78
DHFR-201ENST00000439211 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
DHFR-201ENST00000439211 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
DHFR-201ENST00000439211 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
DHFR-201ENST00000439211 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
DHFR-201ENST00000439211 LINC01556Q5JQF7 62 aa10.19□□□□□ -0.78
DHFR-201ENST00000439211 LINC00313P59037 77 aa10.19□□□□□ -0.78
DHFR-201ENST00000439211 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
DHFR-201ENST00000439211 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
DHFR-201ENST00000439211 LCE6AA0A183 80 aa10.18□□□□□ -0.78
DHFR-201ENST00000439211 KCNQ1DNQ9H478 68 aa10.18□□□□□ -0.78
DHFR-201ENST00000439211 Q9BRP9 147 aa10.17□□□□□ -0.78
DHFR-201ENST00000439211 IGLV5-48A0A075B6I7 105 aa10.17□□□□□ -0.78
DHFR-201ENST00000439211 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
DHFR-201ENST00000439211 H3BNG1 76 aa10.15□□□□□ -0.78
DHFR-201ENST00000439211 KRTAP24-1Q3LI83 254 aa10.15□□□□□ -0.78
DHFR-201ENST00000439211 TENM3Q9P273 2699 aa10.15□□□□□ -0.78
DHFR-201ENST00000439211 H3BPC8 53 aa10.14□□□□□ -0.79
DHFR-201ENST00000439211 SPINK7P58062 85 aa10.14□□□□□ -0.79
DHFR-201ENST00000439211 CASC10Q5T4H9 136 aa10.12□□□□□ -0.79
DHFR-201ENST00000439211 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
DHFR-201ENST00000439211 TRRAPQ9Y4A5 3859 aa10.11□□□□□ -0.79
DHFR-201ENST00000439211 Q6ZRX8 168 aa10.1□□□□□ -0.79
DHFR-201ENST00000439211 PRLHP81277 87 aa10.08□□□□□ -0.8
DHFR-201ENST00000439211 RETNLBQ9BQ08 111 aa10.08□□□□□ -0.8
DHFR-201ENST00000439211 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
DHFR-201ENST00000439211 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
DHFR-201ENST00000439211 REG3GQ6UW15 175 aa10.05□□□□□ -0.8
DHFR-201ENST00000439211 ANK3Q12955 4377 aaKnown RBP10.05□□□□□ -0.8
DHFR-201ENST00000439211 DNAH10OSP0CZ25 163 aa10.04□□□□□ -0.8
DHFR-201ENST00000439211 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
DHFR-201ENST00000439211 SPRR4Q96PI1 79 aa10.04□□□□□ -0.8
DHFR-201ENST00000439211 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
DHFR-201ENST00000439211 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.8
DHFR-201ENST00000439211 CDK2AP2O75956 126 aa10.02□□□□□ -0.81
DHFR-201ENST00000439211 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
DHFR-201ENST00000439211 IGFL1Q6UW32 110 aa10□□□□□ -0.81
DHFR-201ENST00000439211 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.81
DHFR-201ENST00000439211 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.81
DHFR-201ENST00000439211 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
DHFR-201ENST00000439211 ZNF706Q9Y5V0 76 aaPredicted RBP9.93□□□□□ -0.82
DHFR-201ENST00000439211 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
DHFR-201ENST00000439211 A8MWP4 228 aa9.92□□□□□ -0.82
DHFR-201ENST00000439211 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
DHFR-201ENST00000439211 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
DHFR-201ENST00000439211 A0A1B0GU69 56 aa9.9□□□□□ -0.82
DHFR-201ENST00000439211 TNP2Q05952 138 aa9.9□□□□□ -0.82
DHFR-201ENST00000439211 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
DHFR-201ENST00000439211 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
DHFR-201ENST00000439211 IGHV6-1A0A0B4J1U7 121 aa9.87□□□□□ -0.83
DHFR-201ENST00000439211 HRES1P13985 223 aa9.87□□□□□ -0.83
DHFR-201ENST00000439211 CSAG1Q6PB30 78 aa9.86□□□□□ -0.83
DHFR-201ENST00000439211 K7EIL1 84 aa9.85□□□□□ -0.83
DHFR-201ENST00000439211 IGLV9-49A0A0B4J1Y8 123 aa9.85□□□□□ -0.83
DHFR-201ENST00000439211 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
DHFR-201ENST00000439211 TP53AIP1Q9HCN2 124 aa9.85□□□□□ -0.83
DHFR-201ENST00000439211 C14orf177Q52M58 125 aa9.84□□□□□ -0.83
DHFR-201ENST00000439211 SPRR1AP35321 89 aa9.83□□□□□ -0.84
DHFR-201ENST00000439211 IGLV5-37A0A075B6J1 123 aa9.81□□□□□ -0.84
DHFR-201ENST00000439211 KRTAP4-16G5E9R7 235 aaPredicted RBP9.81□□□□□ -0.84
DHFR-201ENST00000439211 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
DHFR-201ENST00000439211 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
DHFR-201ENST00000439211 MIR22HGQ0VDD5 57 aa9.79□□□□□ -0.84
DHFR-201ENST00000439211 ACYP2P14621 99 aa9.78□□□□□ -0.84
DHFR-201ENST00000439211 IGLV8-61A0A075B6I0 122 aa9.78□□□□□ -0.84
DHFR-201ENST00000439211 SPINK6Q6UWN8 80 aa9.78□□□□□ -0.84
DHFR-201ENST00000439211 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
DHFR-201ENST00000439211 UQCR11O14957 56 aa9.75□□□□□ -0.85
DHFR-201ENST00000439211 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
DHFR-201ENST00000439211 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
DHFR-201ENST00000439211 MMP24-AS1A0A0U1RRL7 71 aa9.73□□□□□ -0.85
DHFR-201ENST00000439211 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
DHFR-201ENST00000439211 SRRM2Q9UQ35 2752 aaKnown RBP9.68□□□□□ -0.86
DHFR-201ENST00000439211 LINC00472Q9H8W2 130 aa9.66□□□□□ -0.86
DHFR-201ENST00000439211 PLAC8Q9NZF1 115 aa9.64□□□□□ -0.87
DHFR-201ENST00000439211 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
DHFR-201ENST00000439211 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
DHFR-201ENST00000439211 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
DHFR-201ENST00000439211 KRTAP11-1Q8IUC1 163 aa9.62□□□□□ -0.87
DHFR-201ENST00000439211 Q6ZR54 194 aa9.62□□□□□ -0.87
DHFR-201ENST00000439211 ANAPC11Q9NYG5 84 aa9.61□□□□□ -0.87
DHFR-201ENST00000439211 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
DHFR-201ENST00000439211 APLNQ9ULZ1 77 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms