RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 H3BUA1 57 aa1.15□□□□□ -2.23
LSM1P1-201ENST00000438629 DEFB104AQ8WTQ1 72 aa1.15□□□□□ -2.23
LSM1P1-201ENST00000438629 ZDBF2Q9HCK1 2354 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 PRLHP81277 87 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 CLPSL2Q6UWE3 100 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 TMEM167AQ8TBQ9 72 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 PIEZO2Q9H5I5 2752 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 RP1L1Q8IWN7 2480 aaPredicted RBP1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 NAV3Q8IVL0 2385 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 CNTRLQ7Z7A1 2325 aa1.14□□□□□ -2.23
LSM1P1-201ENST00000438629 JMJD1CQ15652 2540 aa1.13□□□□□ -2.23
LSM1P1-201ENST00000438629 SPRR1BP22528 89 aa1.13□□□□□ -2.23
LSM1P1-201ENST00000438629 KLK9Q2XQG4 91 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 DEFB106AQ8N104 65 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 S4R3F8 94 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 IGF2RP11717 2491 aa1.12□□□□□ -2.23
LSM1P1-201ENST00000438629 RPL39P5Q59GN2 51 aa1.11□□□□□ -2.23
LSM1P1-201ENST00000438629 USF3Q68DE3 2245 aa1.11□□□□□ -2.23
LSM1P1-201ENST00000438629 K7EIM0 57 aa1.1□□□□□ -2.23
LSM1P1-201ENST00000438629 KRTAP4-1Q9BYQ7 146 aa1.1□□□□□ -2.23
LSM1P1-201ENST00000438629 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
LSM1P1-201ENST00000438629 PCNX1Q96RV3 2341 aa1.1□□□□□ -2.23
LSM1P1-201ENST00000438629 WNK2Q9Y3S1 2297 aa1.09□□□□□ -2.24
LSM1P1-201ENST00000438629 PLCE1Q9P212 2302 aa1.09□□□□□ -2.24
LSM1P1-201ENST00000438629 SPINK1P00995 79 aa1.08□□□□□ -2.24
LSM1P1-201ENST00000438629 TPRP12270 2363 aaKnown RBP1.08□□□□□ -2.24
LSM1P1-201ENST00000438629 DEFB108AA8MXU0 73 aa1.07□□□□□ -2.24
LSM1P1-201ENST00000438629 ZNF462Q96JM2 2506 aa1.06□□□□□ -2.24
LSM1P1-201ENST00000438629 A0A0D9SG42 100 aa1.06□□□□□ -2.24
LSM1P1-201ENST00000438629 NOP10Q9NPE3 64 aaKnown RBP1.06□□□□□ -2.24
LSM1P1-201ENST00000438629 ROS1P08922 2347 aa1.05□□□□□ -2.24
LSM1P1-201ENST00000438629 PKDREJQ9NTG1 2253 aa1.04□□□□□ -2.24
LSM1P1-201ENST00000438629 SRCAPQ6ZRS2 3230 aa1.03□□□□□ -2.24
LSM1P1-201ENST00000438629 EP400Q96L91 3159 aa1.03□□□□□ -2.24
LSM1P1-201ENST00000438629 FCGBPQ9Y6R7 5405 aaPredicted RBP1.01□□□□□ -2.25
LSM1P1-201ENST00000438629 KRTAP10-4P60372 401 aaPredicted RBP1.01□□□□□ -2.25
LSM1P1-201ENST00000438629 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
LSM1P1-201ENST00000438629 REV3LO60673 3130 aa1.01□□□□□ -2.25
LSM1P1-201ENST00000438629 C2CD3Q4AC94 2353 aa1□□□□□ -2.25
LSM1P1-201ENST00000438629 APELAP0DMC3 54 aa0.99□□□□□ -2.25
LSM1P1-201ENST00000438629 STATHP02808 62 aa0.98□□□□□ -2.25
LSM1P1-201ENST00000438629 VPS13DQ5THJ4 4388 aa0.98□□□□□ -2.25
LSM1P1-201ENST00000438629 A0A0C4DFX4 3053 aa0.98□□□□□ -2.25
LSM1P1-201ENST00000438629 F8P00451 2351 aa0.98□□□□□ -2.25
LSM1P1-201ENST00000438629 WNK1Q9H4A3 2382 aa0.97□□□□□ -2.25
LSM1P1-201ENST00000438629 DSPP15924 2871 aaKnown RBP0.97□□□□□ -2.25
LSM1P1-201ENST00000438629 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
LSM1P1-201ENST00000438629 CEP350Q5VT06 3117 aa0.97□□□□□ -2.25
LSM1P1-201ENST00000438629 ABCA2Q9BZC7 2435 aa0.96□□□□□ -2.26
LSM1P1-201ENST00000438629 UTRNP46939 3433 aa0.96□□□□□ -2.26
LSM1P1-201ENST00000438629 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
LSM1P1-201ENST00000438629 GOLGB1Q14789 3259 aaKnown RBP0.95□□□□□ -2.26
LSM1P1-201ENST00000438629 DNAH11Q96DT5 4516 aa0.95□□□□□ -2.26
LSM1P1-201ENST00000438629 DEFB1P60022 68 aa0.95□□□□□ -2.26
LSM1P1-201ENST00000438629 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
LSM1P1-201ENST00000438629 M0QZ58 72 aa0.94□□□□□ -2.26
LSM1P1-201ENST00000438629 PCNTO95613 3336 aa0.94□□□□□ -2.26
LSM1P1-201ENST00000438629 ASH1LQ9NR48 2969 aaKnown RBP0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 CACNA1HO95180 2353 aa0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 MEGF8Q7Z7M0 2845 aa0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 MYCBP2O75592 4640 aa0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 CELSR2Q9HCU4 2923 aa0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 CHD7Q9P2D1 2997 aa0.93□□□□□ -2.26
LSM1P1-201ENST00000438629 PRRC2CQ9Y520 2896 aaKnown RBP0.92□□□□□ -2.26
LSM1P1-201ENST00000438629 TNRC18O15417 2968 aaPredicted RBP0.92□□□□□ -2.26
LSM1P1-201ENST00000438629 TTC28Q96AY4 2481 aa0.91□□□□□ -2.26
LSM1P1-201ENST00000438629 TRANK1O15050 2925 aa0.91□□□□□ -2.26
LSM1P1-201ENST00000438629 H0YGG7 62 aa0.91□□□□□ -2.26
LSM1P1-201ENST00000438629 H3BUX3 64 aa0.91□□□□□ -2.26
LSM1P1-201ENST00000438629 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
LSM1P1-201ENST00000438629 CEP290O15078 2479 aa0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 DEFB135Q30KP9 77 aa0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 RHPN1-AS1Q9BWJ2 59 aa0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 EP300Q09472 2414 aaPredicted RBP0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 ABCA12Q86UK0 2595 aa0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 TENM2Q9NT68 2774 aa0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 MKI67P46013 3256 aaKnown RBP0.9□□□□□ -2.27
LSM1P1-201ENST00000438629 HTN1P15515 57 aa0.89□□□□□ -2.27
LSM1P1-201ENST00000438629 COX14Q96I36 57 aa0.89□□□□□ -2.27
LSM1P1-201ENST00000438629 CELSR1Q9NYQ6 3014 aa0.89□□□□□ -2.27
LSM1P1-201ENST00000438629 ACACAQ13085 2346 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 DEFB136Q30KP8 78 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 BRCA2P51587 3418 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 SPTA1P02549 2419 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 SACSQ9NZJ4 4579 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 COL6A3P12111 3177 aa0.88□□□□□ -2.27
LSM1P1-201ENST00000438629 ZNF292O60281 2723 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 CENPFP49454 3210 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 OTOGQ6ZRI0 2925 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 SPTBN4Q9H254 2564 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 EYSQ5T1H1 3165 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 PKD1L2Q7Z442 2459 aa0.87□□□□□ -2.27
LSM1P1-201ENST00000438629 POLQO75417 2590 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 M0R2T5 61 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 TNP1P09430 55 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
LSM1P1-201ENST00000438629 SZT2Q5T011 3432 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms