RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
CLDN4-203ENST00000435050 TGP01266 2768 aa7.67□□□□□ -1.18
CLDN4-203ENST00000435050 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
CLDN4-203ENST00000435050 PANO1I0J062 215 aa7.66□□□□□ -1.18
CLDN4-203ENST00000435050 CD164Q04900 197 aa7.66□□□□□ -1.18
CLDN4-203ENST00000435050 FAM30AQ9NZY2 134 aa7.66□□□□□ -1.18
CLDN4-203ENST00000435050 CXCL6P80162 114 aa7.66□□□□□ -1.18
CLDN4-203ENST00000435050 NDUFS5O43920 106 aa7.65□□□□□ -1.19
CLDN4-203ENST00000435050 SPRR1AP35321 89 aa7.64□□□□□ -1.19
CLDN4-203ENST00000435050 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
CLDN4-203ENST00000435050 Q5XG85 94 aa7.63□□□□□ -1.19
CLDN4-203ENST00000435050 IGFL1Q6UW32 110 aa7.63□□□□□ -1.19
CLDN4-203ENST00000435050 H3BS24 57 aa7.63□□□□□ -1.19
CLDN4-203ENST00000435050 BCE1O60756 84 aa7.63□□□□□ -1.19
CLDN4-203ENST00000435050 NDUFB1O75438 58 aa7.62□□□□□ -1.19
CLDN4-203ENST00000435050 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
CLDN4-203ENST00000435050 TNP2Q05952 138 aa7.62□□□□□ -1.19
CLDN4-203ENST00000435050 WWC2-AS2Q96NR7 200 aa7.62□□□□□ -1.19
CLDN4-203ENST00000435050 RPL37AP61513 92 aaKnown RBP7.61□□□□□ -1.19
CLDN4-203ENST00000435050 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
CLDN4-203ENST00000435050 KRTAP4-16G5E9R7 235 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-203ENST00000435050 IGLV5-48A0A075B6I7 105 aa7.61□□□□□ -1.19
CLDN4-203ENST00000435050 TRAV7A0A075B6U4 112 aa7.6□□□□□ -1.19
CLDN4-203ENST00000435050 PSPHP1O15172 72 aa7.6□□□□□ -1.19
CLDN4-203ENST00000435050 SMIM29Q86T20 159 aa7.59□□□□□ -1.19
CLDN4-203ENST00000435050 MP68P56378 58 aa7.59□□□□□ -1.19
CLDN4-203ENST00000435050 MOBPQ13875 183 aa7.59□□□□□ -1.19
CLDN4-203ENST00000435050 CIRBP-AS1Q8TBR5 109 aa7.58□□□□□ -1.2
CLDN4-203ENST00000435050 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
CLDN4-203ENST00000435050 K7EQZ3 153 aa7.57□□□□□ -1.2
CLDN4-203ENST00000435050 ZNF706Q9Y5V0 76 aaPredicted RBP7.56□□□□□ -1.2
CLDN4-203ENST00000435050 HUWE1Q7Z6Z7 4374 aaKnown RBP7.56□□□□□ -1.2
CLDN4-203ENST00000435050 COL7A1Q02388 2944 aa7.56□□□□□ -1.2
CLDN4-203ENST00000435050 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
CLDN4-203ENST00000435050 OXTP01178 125 aa7.56□□□□□ -1.2
CLDN4-203ENST00000435050 IGKV4-1P06312 121 aa7.55□□□□□ -1.2
CLDN4-203ENST00000435050 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
CLDN4-203ENST00000435050 CYSTM1Q9H1C7 97 aa7.54□□□□□ -1.2
CLDN4-203ENST00000435050 ANK2Q01484 3957 aa7.54□□□□□ -1.2
CLDN4-203ENST00000435050 CSMD3Q7Z407 3707 aa7.54□□□□□ -1.2
CLDN4-203ENST00000435050 PRR4Q16378 134 aa7.53□□□□□ -1.2
CLDN4-203ENST00000435050 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
CLDN4-203ENST00000435050 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
CLDN4-203ENST00000435050 IGHV6-1A0A0B4J1U7 121 aa7.49□□□□□ -1.21
CLDN4-203ENST00000435050 CHKB-CPT1BH3BT56 60 aa7.49□□□□□ -1.21
CLDN4-203ENST00000435050 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CLDN4-203ENST00000435050 Q6ZR54 194 aa7.49□□□□□ -1.21
CLDN4-203ENST00000435050 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
CLDN4-203ENST00000435050 ZNF861PO60384 105 aa7.49□□□□□ -1.21
CLDN4-203ENST00000435050 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
CLDN4-203ENST00000435050 A0A1B0GW54 56 aa7.48□□□□□ -1.21
CLDN4-203ENST00000435050 NDUFC1O43677 76 aa7.48□□□□□ -1.21
CLDN4-203ENST00000435050 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
CLDN4-203ENST00000435050 KRTAP10-2P60368 255 aa7.48□□□□□ -1.21
CLDN4-203ENST00000435050 DSCR10P59022 87 aa7.46□□□□□ -1.21
CLDN4-203ENST00000435050 LINC00208Q96KT6 92 aa7.45□□□□□ -1.22
CLDN4-203ENST00000435050 A6NED7 52 aa7.45□□□□□ -1.22
CLDN4-203ENST00000435050 RBM12B-AS1Q9P1G2 102 aa7.44□□□□□ -1.22
CLDN4-203ENST00000435050 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
CLDN4-203ENST00000435050 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
CLDN4-203ENST00000435050 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
CLDN4-203ENST00000435050 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
CLDN4-203ENST00000435050 SMR3BP02814 79 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-203ENST00000435050 FP248Q71RG6 208 aaPredicted RBP7.4□□□□□ -1.23
CLDN4-203ENST00000435050 DNAH9Q9NYC9 4486 aa7.4□□□□□ -1.23
CLDN4-203ENST00000435050 A8MWP4 228 aa7.38□□□□□ -1.23
CLDN4-203ENST00000435050 H0Y9P7 68 aa7.38□□□□□ -1.23
CLDN4-203ENST00000435050 PRR15Q8IV56 129 aa7.38□□□□□ -1.23
CLDN4-203ENST00000435050 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
CLDN4-203ENST00000435050 H7BZZ5 65 aa7.37□□□□□ -1.23
CLDN4-203ENST00000435050 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
CLDN4-203ENST00000435050 SPRR1BP22528 89 aa7.37□□□□□ -1.23
CLDN4-203ENST00000435050 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
CLDN4-203ENST00000435050 OCR1Q9BZK8 76 aa7.36□□□□□ -1.23
CLDN4-203ENST00000435050 CMYA5Q8N3K9 4069 aa7.36□□□□□ -1.23
CLDN4-203ENST00000435050 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
CLDN4-203ENST00000435050 KTN1-AS1Q86SY8 53 aa7.36□□□□□ -1.23
CLDN4-203ENST00000435050 IGLV8-61A0A075B6I0 122 aa7.35□□□□□ -1.23
CLDN4-203ENST00000435050 KLKP1Q107X0 134 aa7.35□□□□□ -1.23
CLDN4-203ENST00000435050 DNAH10Q8IVF4 4471 aa7.35□□□□□ -1.23
CLDN4-203ENST00000435050 PRR15LQ9BU68 103 aa7.33□□□□□ -1.24
CLDN4-203ENST00000435050 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
CLDN4-203ENST00000435050 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
CLDN4-203ENST00000435050 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
CLDN4-203ENST00000435050 C1orf64Q8NEQ6 169 aa7.3□□□□□ -1.24
CLDN4-203ENST00000435050 A8MUN3 132 aa7.3□□□□□ -1.24
CLDN4-203ENST00000435050 LINC00472Q9H8W2 130 aa7.3□□□□□ -1.24
CLDN4-203ENST00000435050 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
CLDN4-203ENST00000435050 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
CLDN4-203ENST00000435050 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
CLDN4-203ENST00000435050 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
CLDN4-203ENST00000435050 LYSTQ99698 3801 aa7.26□□□□□ -1.25
CLDN4-203ENST00000435050 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
CLDN4-203ENST00000435050 DNAH3Q8TD57 4116 aa7.25□□□□□ -1.25
CLDN4-203ENST00000435050 SSBP3-AS1Q7Z2R9 100 aa7.25□□□□□ -1.25
CLDN4-203ENST00000435050 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
CLDN4-203ENST00000435050 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
CLDN4-203ENST00000435050 FAM229BQ4G0N7 80 aa7.23□□□□□ -1.25
CLDN4-203ENST00000435050 A0A087X002 238 aa7.23□□□□□ -1.25
CLDN4-203ENST00000435050 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms