RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
ECHDC1-207ENST00000430841 C2orf82Q6UX34 121 aa4.58□□□□□ -1.68
ECHDC1-207ENST00000430841 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
ECHDC1-207ENST00000430841 H3BT86 120 aa4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 TCL1BO95988 128 aa4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 FAM229BQ4G0N7 80 aa4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 MUSTN1Q8IVN3 82 aa4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 NDUFA12Q9UI09 145 aa4.57□□□□□ -1.68
ECHDC1-207ENST00000430841 TRBV10-2A0A0K0K1G8 114 aa4.56□□□□□ -1.68
ECHDC1-207ENST00000430841 SLC25A20O43772 301 aa4.56□□□□□ -1.68
ECHDC1-207ENST00000430841 TSPEAR-AS2P59090 65 aa4.56□□□□□ -1.68
ECHDC1-207ENST00000430841 LINC00242Q5T6M2 205 aa4.56□□□□□ -1.68
ECHDC1-207ENST00000430841 FAM240AA0A1B0GVK7 77 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 RPL37AP8A6NKH3 93 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 Q1RN00 199 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 ANKRD29Q8N6D5 301 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 LITAFQ99732 161 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 ANAPC11Q9NYG5 84 aa4.55□□□□□ -1.68
ECHDC1-207ENST00000430841 ACYP1P07311 99 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 CXCL5P42830 114 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 SPAG11AQ6PDA7 123 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 Q6Q795 121 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 Q6ZVQ6 151 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 FP248Q71RG6 208 aaPredicted RBP4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
ECHDC1-207ENST00000430841 KIAA0087Q14695 138 aa4.53□□□□□ -1.68
ECHDC1-207ENST00000430841 Q8IZM0 81 aa4.53□□□□□ -1.68
ECHDC1-207ENST00000430841 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 C9JAW5 83 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 FAM19A1Q7Z5A9 133 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 LINC00167Q96N53 147 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
ECHDC1-207ENST00000430841 IGKV2-28A0A075B6P5 120 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 LST1O00453 97 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 IGKV2D-28P01615 120 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 TRACP01848 142 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 SPINK8P0C7L1 97 aa4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 ZNF706Q9Y5V0 76 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-207ENST00000430841 PRLHP81277 87 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 DAND5Q8N907 189 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 LINC00308Q8TCZ7 52 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 IMUPQ9GZP8 106 aa4.5□□□□□ -1.69
ECHDC1-207ENST00000430841 SMIM1B2RUZ4 78 aa4.49□□□□□ -1.69
ECHDC1-207ENST00000430841 SNCGO76070 127 aa4.49□□□□□ -1.69
ECHDC1-207ENST00000430841 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
ECHDC1-207ENST00000430841 ZNF625Q96I27 306 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-207ENST00000430841 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
ECHDC1-207ENST00000430841 H0YGX0 51 aa4.48□□□□□ -1.69
ECHDC1-207ENST00000430841 C3orf22Q8N5N4 141 aa4.47□□□□□ -1.69
ECHDC1-207ENST00000430841 COX7B2Q8TF08 81 aa4.47□□□□□ -1.69
ECHDC1-207ENST00000430841 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
ECHDC1-207ENST00000430841 A0A1B0GX51 115 aa4.46□□□□□ -1.7
ECHDC1-207ENST00000430841 H7C2G1 150 aa4.46□□□□□ -1.7
ECHDC1-207ENST00000430841 TMEM126AQ9H061 195 aa4.46□□□□□ -1.7
ECHDC1-207ENST00000430841 SPINK1P00995 79 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 MT-ATP8P03928 68 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 COX17Q14061 63 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 Q8NBF4 154 aa4.45□□□□□ -1.7
ECHDC1-207ENST00000430841 TRBV7-7A0A0K0K1E9 115 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 TEX49A0A1B0GTD5 131 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 H3BQ85 93 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 M0R2T5 61 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 PFN2P35080 140 aa4.44□□□□□ -1.7
ECHDC1-207ENST00000430841 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
ECHDC1-207ENST00000430841 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
ECHDC1-207ENST00000430841 NDUFC2O95298 119 aa4.42□□□□□ -1.7
ECHDC1-207ENST00000430841 DNAL4O96015 105 aa4.42□□□□□ -1.7
ECHDC1-207ENST00000430841 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
ECHDC1-207ENST00000430841 SND1-IT1Q9HBX3 110 aa4.42□□□□□ -1.7
ECHDC1-207ENST00000430841 NDUFV3P56181 108 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-207ENST00000430841 CLEC2BQ92478 149 aa4.41□□□□□ -1.7
ECHDC1-207ENST00000430841 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
ECHDC1-207ENST00000430841 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 M0R378 163 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 LINC00158P58513 81 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 S100A7L2Q5SY68 101 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 SOSTDC1Q6X4U4 206 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 MIR7-3HGQ8N6C7 128 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
ECHDC1-207ENST00000430841 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
ECHDC1-207ENST00000430841 NPC2P61916 151 aa4.39□□□□□ -1.71
ECHDC1-207ENST00000430841 OBSCN-AS1Q96MR7 158 aa4.39□□□□□ -1.71
ECHDC1-207ENST00000430841 IGLV8-61A0A075B6I0 122 aa4.38□□□□□ -1.71
ECHDC1-207ENST00000430841 MOBPQ13875 183 aa4.38□□□□□ -1.71
ECHDC1-207ENST00000430841 FAM218AQ96MZ4 157 aa4.38□□□□□ -1.71
ECHDC1-207ENST00000430841 TMEM256-PLSCR3K7ERE1 68 aa4.37□□□□□ -1.71
ECHDC1-207ENST00000430841 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-207ENST00000430841 C9orf153Q5TBE3 101 aa4.37□□□□□ -1.71
ECHDC1-207ENST00000430841 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms