RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NHP2Q9NX24 153 aaKnown RBP6.23□□□□□ -1.41
HDAC4-202ENST00000430200 SNRPEP62304 92 aaKnown RBP6.22□□□□□ -1.41
HDAC4-202ENST00000430200 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
HDAC4-202ENST00000430200 TRBV7-7A0A0K0K1E9 115 aa6.2□□□□□ -1.42
HDAC4-202ENST00000430200 hADV29S1A0JD25 119 aa6.2□□□□□ -1.42
HDAC4-202ENST00000430200 CLEC2BQ92478 149 aa6.2□□□□□ -1.42
HDAC4-202ENST00000430200 H3BUT2 72 aa6.19□□□□□ -1.42
HDAC4-202ENST00000430200 S100A2P29034 98 aa6.19□□□□□ -1.42
HDAC4-202ENST00000430200 F8WEM9 126 aa6.18□□□□□ -1.42
HDAC4-202ENST00000430200 TCL1BO95988 128 aa6.17□□□□□ -1.42
HDAC4-202ENST00000430200 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
HDAC4-202ENST00000430200 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
HDAC4-202ENST00000430200 COX8AP10176 69 aa6.16□□□□□ -1.42
HDAC4-202ENST00000430200 VAMP3Q15836 100 aa6.16□□□□□ -1.42
HDAC4-202ENST00000430200 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
HDAC4-202ENST00000430200 CFC1BP0CG36 223 aa6.15□□□□□ -1.42
HDAC4-202ENST00000430200 Q6JHZ5 121 aa6.15□□□□□ -1.42
HDAC4-202ENST00000430200 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.15□□□□□ -1.42
HDAC4-202ENST00000430200 C2orf91Q6ZV80 131 aa6.15□□□□□ -1.42
HDAC4-202ENST00000430200 OBSCN-AS1Q96MR7 158 aa6.15□□□□□ -1.42
HDAC4-202ENST00000430200 HIST1H4GQ99525 98 aa6.15□□□□□ -1.42
HDAC4-202ENST00000430200 CFC1P0CG37 223 aa6.14□□□□□ -1.43
HDAC4-202ENST00000430200 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
HDAC4-202ENST00000430200 C14orf144Q96I85 54 aa6.12□□□□□ -1.43
HDAC4-202ENST00000430200 DLEU1O43261 78 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 S100A6P06703 90 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 BVES-AS1Q5T3Y7 98 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 Q75L30 129 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 Q96NJ1 140 aa6.11□□□□□ -1.43
HDAC4-202ENST00000430200 PPDPFLQ8WWR9 84 aa6.1□□□□□ -1.43
HDAC4-202ENST00000430200 PAM16Q9Y3D7 125 aa6.1□□□□□ -1.43
HDAC4-202ENST00000430200 M0R2T5 61 aa6.09□□□□□ -1.43
HDAC4-202ENST00000430200 A0A0B4J2C4 111 aa6.08□□□□□ -1.44
HDAC4-202ENST00000430200 S100A1P23297 94 aa6.08□□□□□ -1.44
HDAC4-202ENST00000430200 SPATA45Q537H7 98 aa6.08□□□□□ -1.44
HDAC4-202ENST00000430200 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
HDAC4-202ENST00000430200 Q6Q795 121 aa6.07□□□□□ -1.44
HDAC4-202ENST00000430200 HIGD1BQ9P298 99 aa6.07□□□□□ -1.44
HDAC4-202ENST00000430200 LST1O00453 97 aa6.06□□□□□ -1.44
HDAC4-202ENST00000430200 FXYD2P54710 66 aa6.06□□□□□ -1.44
HDAC4-202ENST00000430200 A0A087WSZ3 146 aa6.05□□□□□ -1.44
HDAC4-202ENST00000430200 NDUFV3P56181 108 aaKnown RBP6.05□□□□□ -1.44
HDAC4-202ENST00000430200 RAB37Q96AX2 223 aa6.05□□□□□ -1.44
HDAC4-202ENST00000430200 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
HDAC4-202ENST00000430200 A0A1W2PNM2 257 aa6.04□□□□□ -1.44
HDAC4-202ENST00000430200 A8MUU9 505 aa6.04□□□□□ -1.44
HDAC4-202ENST00000430200 TRIAP1O43715 76 aa6.04□□□□□ -1.44
HDAC4-202ENST00000430200 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
HDAC4-202ENST00000430200 DSCR10P59022 87 aa6.03□□□□□ -1.44
HDAC4-202ENST00000430200 CEND1Q8N111 149 aa6.03□□□□□ -1.44
HDAC4-202ENST00000430200 VAMP8Q9BV40 100 aa6.03□□□□□ -1.44
HDAC4-202ENST00000430200 A0A1B0GV72 72 aa6.02□□□□□ -1.45
HDAC4-202ENST00000430200 ATP11AUNQ6ZP68 121 aa6.02□□□□□ -1.45
HDAC4-202ENST00000430200 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
HDAC4-202ENST00000430200 USH2AO75445 5202 aa6.02□□□□□ -1.45
HDAC4-202ENST00000430200 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
HDAC4-202ENST00000430200 H0YGX0 51 aa6.01□□□□□ -1.45
HDAC4-202ENST00000430200 H3BMG7 143 aa6.01□□□□□ -1.45
HDAC4-202ENST00000430200 K7ERJ3 54 aa6.01□□□□□ -1.45
HDAC4-202ENST00000430200 SS18L2Q9UHA2 77 aa6.01□□□□□ -1.45
HDAC4-202ENST00000430200 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
HDAC4-202ENST00000430200 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
HDAC4-202ENST00000430200 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
HDAC4-202ENST00000430200 FABP2P12104 132 aa5.98□□□□□ -1.45
HDAC4-202ENST00000430200 SIGMAR1Q99720 223 aa5.98□□□□□ -1.45
HDAC4-202ENST00000430200 PYY3Q5JQD4 70 aa5.97□□□□□ -1.45
HDAC4-202ENST00000430200 A0A1B0GX51 115 aa5.96□□□□□ -1.46
HDAC4-202ENST00000430200 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
HDAC4-202ENST00000430200 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
HDAC4-202ENST00000430200 A6NJY4 79 aa5.93□□□□□ -1.46
HDAC4-202ENST00000430200 MT2AP02795 61 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 IGKV4-1P06312 121 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 HRES1P13985 223 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 HSD52Q0P140 79 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
HDAC4-202ENST00000430200 TRBV7-4A0A0J9YYF1 115 aa5.91□□□□□ -1.46
HDAC4-202ENST00000430200 ORMDL1Q9P0S3 153 aa5.91□□□□□ -1.46
HDAC4-202ENST00000430200 SNCGO76070 127 aa5.9□□□□□ -1.46
HDAC4-202ENST00000430200 ANKRD29Q8N6D5 301 aa5.9□□□□□ -1.46
HDAC4-202ENST00000430200 MT1FP04733 61 aa5.89□□□□□ -1.47
HDAC4-202ENST00000430200 DNAL4O96015 105 aa5.88□□□□□ -1.47
HDAC4-202ENST00000430200 CCKP06307 115 aa5.88□□□□□ -1.47
HDAC4-202ENST00000430200 PSMB2P49721 201 aa5.88□□□□□ -1.47
HDAC4-202ENST00000430200 LINC00313P59037 77 aa5.88□□□□□ -1.47
HDAC4-202ENST00000430200 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
HDAC4-202ENST00000430200 LCE2BO14633 110 aa5.85□□□□□ -1.47
HDAC4-202ENST00000430200 TRACP01848 142 aa5.85□□□□□ -1.47
HDAC4-202ENST00000430200 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
HDAC4-202ENST00000430200 TRBV20-1A0A075B6N2 111 aa5.84□□□□□ -1.47
HDAC4-202ENST00000430200 GHRHP01286 108 aa5.84□□□□□ -1.47
HDAC4-202ENST00000430200 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
HDAC4-202ENST00000430200 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
HDAC4-202ENST00000430200 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
HDAC4-202ENST00000430200 TMA7Q9Y2S6 64 aaKnown RBP5.83□□□□□ -1.48
HDAC4-202ENST00000430200 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
HDAC4-202ENST00000430200 VPS25Q9BRG1 176 aa5.82□□□□□ -1.48
HDAC4-202ENST00000430200 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
HDAC4-202ENST00000430200 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms