RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 CRYGAP11844 174 aa11.47□□□□□ -0.57
PTCD1-203ENST00000430029 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
PTCD1-203ENST00000430029 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.57
PTCD1-203ENST00000430029 OXTP01178 125 aa11.46□□□□□ -0.57
PTCD1-203ENST00000430029 KRTAP29-1A8MX34 341 aaPredicted RBP11.45□□□□□ -0.58
PTCD1-203ENST00000430029 OCIAD2Q56VL3 154 aa11.45□□□□□ -0.58
PTCD1-203ENST00000430029 DMBT1Q9UGM3 2413 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-203ENST00000430029 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
PTCD1-203ENST00000430029 KRTAP10-8P60410 259 aa11.44□□□□□ -0.58
PTCD1-203ENST00000430029 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
PTCD1-203ENST00000430029 SPCS1Q9Y6A9 102 aa11.43□□□□□ -0.58
PTCD1-203ENST00000430029 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
PTCD1-203ENST00000430029 IGLV9-49A0A0B4J1Y8 123 aa11.41□□□□□ -0.58
PTCD1-203ENST00000430029 LAMTOR3Q9UHA4 124 aa11.41□□□□□ -0.58
PTCD1-203ENST00000430029 H3BMG7 143 aa11.39□□□□□ -0.59
PTCD1-203ENST00000430029 MOBPQ13875 183 aa11.39□□□□□ -0.59
PTCD1-203ENST00000430029 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
PTCD1-203ENST00000430029 K7EP34 96 aa11.37□□□□□ -0.59
PTCD1-203ENST00000430029 BAALC-AS2P0C853 105 aa11.37□□□□□ -0.59
PTCD1-203ENST00000430029 C9JAW5 83 aa11.36□□□□□ -0.59
PTCD1-203ENST00000430029 GHRHP01286 108 aa11.36□□□□□ -0.59
PTCD1-203ENST00000430029 C9orf153Q5TBE3 101 aa11.36□□□□□ -0.59
PTCD1-203ENST00000430029 H3BQ85 93 aa11.35□□□□□ -0.59
PTCD1-203ENST00000430029 J3QL48 77 aa11.35□□□□□ -0.59
PTCD1-203ENST00000430029 TMEM256-PLSCR3K7ERE1 68 aa11.35□□□□□ -0.59
PTCD1-203ENST00000430029 NDUFV3P56181 108 aaKnown RBP11.35□□□□□ -0.59
PTCD1-203ENST00000430029 Q8NBF4 154 aa11.34□□□□□ -0.59
PTCD1-203ENST00000430029 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
PTCD1-203ENST00000430029 MTURNQ8N3F0 131 aa11.33□□□□□ -0.6
PTCD1-203ENST00000430029 UBE2V1Q13404 147 aa11.32□□□□□ -0.6
PTCD1-203ENST00000430029 HERC1Q15751 4861 aa11.31□□□□□ -0.6
PTCD1-203ENST00000430029 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
PTCD1-203ENST00000430029 F8WEM9 126 aa11.31□□□□□ -0.6
PTCD1-203ENST00000430029 A0A0G2JQZ4 141 aa11.3□□□□□ -0.6
PTCD1-203ENST00000430029 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
PTCD1-203ENST00000430029 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
PTCD1-203ENST00000430029 A0A1B0GV72 72 aa11.27□□□□□ -0.61
PTCD1-203ENST00000430029 PRO0461Q9UI25 63 aa11.27□□□□□ -0.61
PTCD1-203ENST00000430029 A0A1B0GV90 55 aa11.26□□□□□ -0.61
PTCD1-203ENST00000430029 H3BT86 120 aa11.26□□□□□ -0.61
PTCD1-203ENST00000430029 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-203ENST00000430029 LINC00304Q8N9R0 145 aa11.26□□□□□ -0.61
PTCD1-203ENST00000430029 IGFL1Q6UW32 110 aa11.25□□□□□ -0.61
PTCD1-203ENST00000430029 Q6JHZ5 121 aa11.23□□□□□ -0.61
PTCD1-203ENST00000430029 HRCT1Q6UXD1 115 aa11.2□□□□□ -0.62
PTCD1-203ENST00000430029 RBM3P98179 157 aaKnown RBP11.18□□□□□ -0.62
PTCD1-203ENST00000430029 C4orf48Q5BLP8 95 aa11.18□□□□□ -0.62
PTCD1-203ENST00000430029 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
PTCD1-203ENST00000430029 OBSCN-AS1Q96MR7 158 aa11.18□□□□□ -0.62
PTCD1-203ENST00000430029 TRBV7-4A0A0J9YYF1 115 aa11.16□□□□□ -0.62
PTCD1-203ENST00000430029 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
PTCD1-203ENST00000430029 CD164Q04900 197 aa11.15□□□□□ -0.62
PTCD1-203ENST00000430029 F8W1H4 67 aa11.14□□□□□ -0.63
PTCD1-203ENST00000430029 SPINK1P00995 79 aa11.14□□□□□ -0.63
PTCD1-203ENST00000430029 A0A1W2PNM2 257 aa11.13□□□□□ -0.63
PTCD1-203ENST00000430029 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
PTCD1-203ENST00000430029 Q6Q795 121 aa11.11□□□□□ -0.63
PTCD1-203ENST00000430029 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
PTCD1-203ENST00000430029 LOC110117498A0A087WWA1 95 aa11.09□□□□□ -0.63
PTCD1-203ENST00000430029 TRBV7-7A0A0K0K1E9 115 aa11.09□□□□□ -0.63
PTCD1-203ENST00000430029 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
PTCD1-203ENST00000430029 TEN1Q86WV5 123 aa11.09□□□□□ -0.63
PTCD1-203ENST00000430029 Q6ZQT0 140 aa11.08□□□□□ -0.64
PTCD1-203ENST00000430029 CCKP06307 115 aa11.07□□□□□ -0.64
PTCD1-203ENST00000430029 ETDBQ3ZM63 59 aa11.05□□□□□ -0.64
PTCD1-203ENST00000430029 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
PTCD1-203ENST00000430029 PDE6GP18545 87 aa11.03□□□□□ -0.64
PTCD1-203ENST00000430029 Q5XG85 94 aa11.03□□□□□ -0.64
PTCD1-203ENST00000430029 LIMD2Q9BT23 127 aa11.03□□□□□ -0.64
PTCD1-203ENST00000430029 A0A087WSZ3 146 aa11.02□□□□□ -0.65
PTCD1-203ENST00000430029 RETNLBQ9BQ08 111 aa11.02□□□□□ -0.65
PTCD1-203ENST00000430029 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
PTCD1-203ENST00000430029 C1orf195Q5TG92 126 aa10.94□□□□□ -0.66
PTCD1-203ENST00000430029 SS18L2Q9UHA2 77 aa10.94□□□□□ -0.66
PTCD1-203ENST00000430029 C21orf62-AS1Q17RA5 79 aa10.92□□□□□ -0.66
PTCD1-203ENST00000430029 A0A1B0GW54 56 aa10.9□□□□□ -0.66
PTCD1-203ENST00000430029 PRR4Q16378 134 aa10.89□□□□□ -0.67
PTCD1-203ENST00000430029 Q96NJ1 140 aa10.89□□□□□ -0.67
PTCD1-203ENST00000430029 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
PTCD1-203ENST00000430029 LINC00472Q9H8W2 130 aa10.85□□□□□ -0.67
PTCD1-203ENST00000430029 HMCN2Q8NDA2 5059 aa10.84□□□□□ -0.67
PTCD1-203ENST00000430029 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
PTCD1-203ENST00000430029 DEFB116Q30KQ4 102 aa10.82□□□□□ -0.68
PTCD1-203ENST00000430029 LINC00846Q9NV44 126 aa10.81□□□□□ -0.68
PTCD1-203ENST00000430029 NREPQ16612 68 aa10.79□□□□□ -0.68
PTCD1-203ENST00000430029 IGKV4-1P06312 121 aa10.77□□□□□ -0.69
PTCD1-203ENST00000430029 Q6ZVQ6 151 aa10.76□□□□□ -0.69
PTCD1-203ENST00000430029 LPAP08519 4548 aa10.75□□□□□ -0.69
PTCD1-203ENST00000430029 SIGMAR1Q99720 223 aa10.74□□□□□ -0.69
PTCD1-203ENST00000430029 KRTAP13-3Q3SY46 172 aa10.73□□□□□ -0.69
PTCD1-203ENST00000430029 TPRXLQ17RH7 258 aa10.72□□□□□ -0.69
PTCD1-203ENST00000430029 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
PTCD1-203ENST00000430029 J3KT08 172 aa10.7□□□□□ -0.7
PTCD1-203ENST00000430029 UBL5Q9BZL1 73 aa10.7□□□□□ -0.7
PTCD1-203ENST00000430029 ACYP1P07311 99 aa10.69□□□□□ -0.7
PTCD1-203ENST00000430029 C9orf92A6NGG3 77 aa10.67□□□□□ -0.7
PTCD1-203ENST00000430029 DSCR10P59022 87 aa10.66□□□□□ -0.7
PTCD1-203ENST00000430029 UBR4Q5T4S7 5183 aa10.66□□□□□ -0.7
PTCD1-203ENST00000430029 BPY2O14599 106 aa10.65□□□□□ -0.7
PTCD1-203ENST00000430029 A0A1B0GVX0 72 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms