RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 PPDPFLQ8WWR9 84 aa10.22□□□□□ -0.77
LINC00887-203ENST00000429578 C9JAW5 83 aa10.21□□□□□ -0.77
LINC00887-203ENST00000429578 LINC00483Q53H64 154 aa10.21□□□□□ -0.77
LINC00887-203ENST00000429578 H3BQ85 93 aa10.21□□□□□ -0.78
LINC00887-203ENST00000429578 J3QL48 77 aa10.2□□□□□ -0.78
LINC00887-203ENST00000429578 KRTAP1-4P0C5Y4 121 aa10.2□□□□□ -0.78
LINC00887-203ENST00000429578 DMBT1Q9UGM3 2413 aaPredicted RBP10.2□□□□□ -0.78
LINC00887-203ENST00000429578 TMEM256-PLSCR3K7ERE1 68 aa10.19□□□□□ -0.78
LINC00887-203ENST00000429578 BAALC-AS2P0C853 105 aa10.19□□□□□ -0.78
LINC00887-203ENST00000429578 PKHD1L1Q86WI1 4243 aa10.18□□□□□ -0.78
LINC00887-203ENST00000429578 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
LINC00887-203ENST00000429578 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
LINC00887-203ENST00000429578 MTURNQ8N3F0 131 aa10.16□□□□□ -0.78
LINC00887-203ENST00000429578 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
LINC00887-203ENST00000429578 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
LINC00887-203ENST00000429578 H3BT86 120 aa10.15□□□□□ -0.78
LINC00887-203ENST00000429578 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
LINC00887-203ENST00000429578 UBE2V1Q13404 147 aa10.14□□□□□ -0.79
LINC00887-203ENST00000429578 LAMTOR3Q9UHA4 124 aa10.14□□□□□ -0.79
LINC00887-203ENST00000429578 PRO0461Q9UI25 63 aa10.13□□□□□ -0.79
LINC00887-203ENST00000429578 NDUFV3P56181 108 aaKnown RBP10.13□□□□□ -0.79
LINC00887-203ENST00000429578 ANKRD29Q8N6D5 301 aa10.13□□□□□ -0.79
LINC00887-203ENST00000429578 A0A087X002 238 aa10.12□□□□□ -0.79
LINC00887-203ENST00000429578 CRYGAP11844 174 aa10.12□□□□□ -0.79
LINC00887-203ENST00000429578 F8W1H4 67 aa10.1□□□□□ -0.79
LINC00887-203ENST00000429578 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
LINC00887-203ENST00000429578 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
LINC00887-203ENST00000429578 IGLV9-49A0A0B4J1Y8 123 aa10.1□□□□□ -0.79
LINC00887-203ENST00000429578 F8WEM9 126 aa10.09□□□□□ -0.79
LINC00887-203ENST00000429578 LRP1Q07954 4544 aaKnown RBP10.09□□□□□ -0.79
LINC00887-203ENST00000429578 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
LINC00887-203ENST00000429578 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
LINC00887-203ENST00000429578 PRR26Q8N8Z3 221 aa10.07□□□□□ -0.8
LINC00887-203ENST00000429578 OXTP01178 125 aa10.06□□□□□ -0.8
LINC00887-203ENST00000429578 C9orf153Q5TBE3 101 aa10.06□□□□□ -0.8
LINC00887-203ENST00000429578 IGLV8-61A0A075B6I0 122 aa10.05□□□□□ -0.8
LINC00887-203ENST00000429578 MOBPQ13875 183 aa10.05□□□□□ -0.8
LINC00887-203ENST00000429578 Q8NBF4 154 aa10.04□□□□□ -0.8
LINC00887-203ENST00000429578 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
LINC00887-203ENST00000429578 A0A1B0GV72 72 aa10.03□□□□□ -0.8
LINC00887-203ENST00000429578 RBM3P98179 157 aaKnown RBP10.02□□□□□ -0.8
LINC00887-203ENST00000429578 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.8
LINC00887-203ENST00000429578 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.8
LINC00887-203ENST00000429578 OBSCN-AS1Q96MR7 158 aa10.02□□□□□ -0.81
LINC00887-203ENST00000429578 Q6JHZ5 121 aa10.01□□□□□ -0.81
LINC00887-203ENST00000429578 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
LINC00887-203ENST00000429578 IGFL1Q6UW32 110 aa9.99□□□□□ -0.81
LINC00887-203ENST00000429578 TEN1Q86WV5 123 aa9.99□□□□□ -0.81
LINC00887-203ENST00000429578 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
LINC00887-203ENST00000429578 DSCR8Q96T75 97 aa9.98□□□□□ -0.81
LINC00887-203ENST00000429578 TRBV7-4A0A0J9YYF1 115 aa9.97□□□□□ -0.81
LINC00887-203ENST00000429578 A0A0G2JQZ4 141 aa9.96□□□□□ -0.81
LINC00887-203ENST00000429578 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.82
LINC00887-203ENST00000429578 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
LINC00887-203ENST00000429578 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
LINC00887-203ENST00000429578 PDE6GP18545 87 aa9.93□□□□□ -0.82
LINC00887-203ENST00000429578 HMCN2Q8NDA2 5059 aa9.91□□□□□ -0.82
LINC00887-203ENST00000429578 Q6ZQT0 140 aa9.91□□□□□ -0.82
LINC00887-203ENST00000429578 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
LINC00887-203ENST00000429578 CCKP06307 115 aa9.9□□□□□ -0.82
LINC00887-203ENST00000429578 TNXBP22105 4242 aa9.9□□□□□ -0.82
LINC00887-203ENST00000429578 CD164Q04900 197 aa9.9□□□□□ -0.83
LINC00887-203ENST00000429578 A0A1W2PNM2 257 aa9.89□□□□□ -0.83
LINC00887-203ENST00000429578 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
LINC00887-203ENST00000429578 Q6Q795 121 aa9.89□□□□□ -0.83
LINC00887-203ENST00000429578 SPAG11AQ6PDA7 123 aa9.88□□□□□ -0.83
LINC00887-203ENST00000429578 HRCT1Q6UXD1 115 aa9.88□□□□□ -0.83
LINC00887-203ENST00000429578 VPS25Q9BRG1 176 aa9.87□□□□□ -0.83
LINC00887-203ENST00000429578 SPINK1P00995 79 aa9.86□□□□□ -0.83
LINC00887-203ENST00000429578 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
LINC00887-203ENST00000429578 A0A1B0GW54 56 aa9.82□□□□□ -0.84
LINC00887-203ENST00000429578 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
LINC00887-203ENST00000429578 A0A087WSZ3 146 aa9.79□□□□□ -0.84
LINC00887-203ENST00000429578 Q5XG85 94 aa9.79□□□□□ -0.84
LINC00887-203ENST00000429578 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
LINC00887-203ENST00000429578 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
LINC00887-203ENST00000429578 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
LINC00887-203ENST00000429578 SS18L2Q9UHA2 77 aa9.76□□□□□ -0.85
LINC00887-203ENST00000429578 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
LINC00887-203ENST00000429578 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
LINC00887-203ENST00000429578 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
LINC00887-203ENST00000429578 FAM240AA0A1B0GVK7 77 aa9.7□□□□□ -0.86
LINC00887-203ENST00000429578 J3QR89 54 aa9.7□□□□□ -0.86
LINC00887-203ENST00000429578 ACYP1P07311 99 aa9.7□□□□□ -0.86
LINC00887-203ENST00000429578 LINC00846Q9NV44 126 aa9.69□□□□□ -0.86
LINC00887-203ENST00000429578 NREPQ16612 68 aa9.67□□□□□ -0.86
LINC00887-203ENST00000429578 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
LINC00887-203ENST00000429578 Q96NJ1 140 aa9.65□□□□□ -0.86
LINC00887-203ENST00000429578 LINC00472Q9H8W2 130 aa9.65□□□□□ -0.86
LINC00887-203ENST00000429578 UBL5Q9BZL1 73 aa9.65□□□□□ -0.87
LINC00887-203ENST00000429578 Q6ZVQ6 151 aa9.64□□□□□ -0.87
LINC00887-203ENST00000429578 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
LINC00887-203ENST00000429578 K7ERU9 68 aa9.63□□□□□ -0.87
LINC00887-203ENST00000429578 DEFB116Q30KQ4 102 aa9.6□□□□□ -0.87
LINC00887-203ENST00000429578 C5orf47Q569G3 176 aa9.59□□□□□ -0.87
LINC00887-203ENST00000429578 LRP2P98164 4655 aa9.59□□□□□ -0.87
LINC00887-203ENST00000429578 IGKV4-1P06312 121 aa9.58□□□□□ -0.88
LINC00887-203ENST00000429578 J3KT08 172 aa9.57□□□□□ -0.88
LINC00887-203ENST00000429578 FP248Q71RG6 208 aaPredicted RBP9.57□□□□□ -0.88
LINC00887-203ENST00000429578 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms