RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 LINC00476Q8WZB0 136 aa4.83□□□□□ -1.64
LINC01108-201ENST00000427276 NSD1Q96L73 2696 aaPredicted RBP4.83□□□□□ -1.64
LINC01108-201ENST00000427276 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
LINC01108-201ENST00000427276 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
LINC01108-201ENST00000427276 CHKB-CPT1BH3BT56 60 aa4.82□□□□□ -1.64
LINC01108-201ENST00000427276 SRRM2Q9UQ35 2752 aaKnown RBP4.81□□□□□ -1.64
LINC01108-201ENST00000427276 A8MU10 97 aa4.81□□□□□ -1.64
LINC01108-201ENST00000427276 FBN1P35555 2871 aaKnown RBP4.81□□□□□ -1.64
LINC01108-201ENST00000427276 IGLV1-50A0A075B6I6 118 aa4.81□□□□□ -1.64
LINC01108-201ENST00000427276 H0Y9J4 135 aa4.81□□□□□ -1.64
LINC01108-201ENST00000427276 UBE2AP49459 152 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 REG3GQ6UW15 175 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 PRR15LQ9BU68 103 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 H0Y9P7 68 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 B9D2Q9BPU9 175 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 PCOTHQ58A44 107 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 LINC01556Q5JQF7 62 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 FBN3Q75N90 2809 aa4.79□□□□□ -1.64
LINC01108-201ENST00000427276 DNHD1Q96M86 4753 aa4.78□□□□□ -1.64
LINC01108-201ENST00000427276 CASC2Q6XLA1 102 aa4.78□□□□□ -1.64
LINC01108-201ENST00000427276 NDUFB1O75438 58 aa4.77□□□□□ -1.65
LINC01108-201ENST00000427276 PRR15Q8IV56 129 aa4.77□□□□□ -1.65
LINC01108-201ENST00000427276 Q1T7F1 81 aa4.77□□□□□ -1.65
LINC01108-201ENST00000427276 NDUFS5O43920 106 aa4.76□□□□□ -1.65
LINC01108-201ENST00000427276 SPRR4Q96PI1 79 aa4.76□□□□□ -1.65
LINC01108-201ENST00000427276 A6NED7 52 aa4.76□□□□□ -1.65
LINC01108-201ENST00000427276 ANK2Q01484 3957 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 KRTAP7-1Q8IUC3 87 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
LINC01108-201ENST00000427276 MGAM2Q2M2H8 2515 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 CSMD3Q7Z407 3707 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 KRTAP10-11P60412 298 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 LINC00588Q9Y4M8 146 aa4.75□□□□□ -1.65
LINC01108-201ENST00000427276 KRTAP4-16G5E9R7 235 aaPredicted RBP4.74□□□□□ -1.65
LINC01108-201ENST00000427276 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
LINC01108-201ENST00000427276 KRTAP3-3Q9BYR6 98 aa4.74□□□□□ -1.65
LINC01108-201ENST00000427276 KRTAP3-2Q9BYR7 98 aa4.74□□□□□ -1.65
LINC01108-201ENST00000427276 A0A1B0GW54 56 aa4.73□□□□□ -1.65
LINC01108-201ENST00000427276 H3BNG1 76 aa4.73□□□□□ -1.65
LINC01108-201ENST00000427276 SPRR1AP35321 89 aa4.73□□□□□ -1.65
LINC01108-201ENST00000427276 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
LINC01108-201ENST00000427276 ZNF706Q9Y5V0 76 aaPredicted RBP4.73□□□□□ -1.65
LINC01108-201ENST00000427276 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
LINC01108-201ENST00000427276 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
LINC01108-201ENST00000427276 CYP4F30PQ9H0H9 118 aa4.72□□□□□ -1.65
LINC01108-201ENST00000427276 LCE6AA0A183 80 aa4.71□□□□□ -1.65
LINC01108-201ENST00000427276 DNAH10OSP0CZ25 163 aa4.71□□□□□ -1.65
LINC01108-201ENST00000427276 Q5VV11 94 aa4.71□□□□□ -1.65
LINC01108-201ENST00000427276 SPAG11AQ6PDA7 123 aa4.71□□□□□ -1.65
LINC01108-201ENST00000427276 COL7A1Q02388 2944 aa4.71□□□□□ -1.66
LINC01108-201ENST00000427276 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.66
LINC01108-201ENST00000427276 UBE2DNLQ8IWF7 75 aa4.7□□□□□ -1.66
LINC01108-201ENST00000427276 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
LINC01108-201ENST00000427276 CNBPP62633 177 aaKnown RBP4.69□□□□□ -1.66
LINC01108-201ENST00000427276 COA5Q86WW8 74 aa4.69□□□□□ -1.66
LINC01108-201ENST00000427276 TENM2Q9NT68 2774 aa4.68□□□□□ -1.66
LINC01108-201ENST00000427276 C16orf90A8MZG2 172 aa4.68□□□□□ -1.66
LINC01108-201ENST00000427276 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
LINC01108-201ENST00000427276 IGLV5-37A0A075B6J1 123 aa4.67□□□□□ -1.66
LINC01108-201ENST00000427276 IGHV6-1A0A0B4J1U7 121 aa4.67□□□□□ -1.66
LINC01108-201ENST00000427276 A8MWP4 228 aa4.67□□□□□ -1.66
LINC01108-201ENST00000427276 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
LINC01108-201ENST00000427276 CDK2AP2O75956 126 aa4.66□□□□□ -1.66
LINC01108-201ENST00000427276 KRTAP11-1Q8IUC1 163 aa4.66□□□□□ -1.66
LINC01108-201ENST00000427276 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
LINC01108-201ENST00000427276 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.66
LINC01108-201ENST00000427276 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.67
LINC01108-201ENST00000427276 KRTAP24-1Q3LI83 254 aa4.65□□□□□ -1.67
LINC01108-201ENST00000427276 LCA10Q71F78 164 aa4.64□□□□□ -1.67
LINC01108-201ENST00000427276 Q75L30 129 aa4.64□□□□□ -1.67
LINC01108-201ENST00000427276 LYSTQ99698 3801 aa4.64□□□□□ -1.67
LINC01108-201ENST00000427276 LINC00313P59037 77 aa4.63□□□□□ -1.67
LINC01108-201ENST00000427276 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
LINC01108-201ENST00000427276 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
LINC01108-201ENST00000427276 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
LINC01108-201ENST00000427276 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
LINC01108-201ENST00000427276 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
LINC01108-201ENST00000427276 MMP24-AS1A0A0U1RRL7 71 aa4.62□□□□□ -1.67
LINC01108-201ENST00000427276 H3BPC8 53 aa4.62□□□□□ -1.67
LINC01108-201ENST00000427276 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
LINC01108-201ENST00000427276 PLA2G1BP04054 148 aaKnown RBP4.61□□□□□ -1.67
LINC01108-201ENST00000427276 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
LINC01108-201ENST00000427276 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
LINC01108-201ENST00000427276 IGLV7-46A0A075B6I9 117 aa4.59□□□□□ -1.67
LINC01108-201ENST00000427276 IGLV8-61A0A075B6I0 122 aa4.59□□□□□ -1.67
LINC01108-201ENST00000427276 SPINK7P58062 85 aa4.59□□□□□ -1.67
LINC01108-201ENST00000427276 ATP11AUNQ6ZP68 121 aa4.59□□□□□ -1.67
LINC01108-201ENST00000427276 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.68
LINC01108-201ENST00000427276 MOBPQ13875 183 aa4.59□□□□□ -1.68
LINC01108-201ENST00000427276 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
LINC01108-201ENST00000427276 K7EIL1 84 aa4.58□□□□□ -1.68
LINC01108-201ENST00000427276 PANO1I0J062 215 aa4.57□□□□□ -1.68
LINC01108-201ENST00000427276 A0A087X002 238 aa4.56□□□□□ -1.68
LINC01108-201ENST00000427276 HRES1P13985 223 aa4.56□□□□□ -1.68
LINC01108-201ENST00000427276 NOTCH2NLQ7Z3S9 236 aa4.56□□□□□ -1.68
LINC01108-201ENST00000427276 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
LINC01108-201ENST00000427276 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
LINC01108-201ENST00000427276 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
LINC01108-201ENST00000427276 C14orf177Q52M58 125 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms