RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 KRTAP10-1P60331 282 aa10.75□□□□□ -0.69
ARHGEF28-203ENST00000426542 PRRC2CQ9Y520 2896 aaKnown RBP10.74□□□□□ -0.69
ARHGEF28-203ENST00000426542 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
ARHGEF28-203ENST00000426542 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
ARHGEF28-203ENST00000426542 ITPR3Q14573 2671 aa10.65□□□□□ -0.7
ARHGEF28-203ENST00000426542 LCE6AA0A183 80 aa10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 RPL37P61927 97 aaKnown RBP10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 M0QZ58 72 aa10.64□□□□□ -0.71
ARHGEF28-203ENST00000426542 ROMO1P60602 79 aa10.62□□□□□ -0.71
ARHGEF28-203ENST00000426542 H1FX-AS1Q4G0G2 97 aa10.61□□□□□ -0.71
ARHGEF28-203ENST00000426542 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
ARHGEF28-203ENST00000426542 ATRQ13535 2644 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 PANO1I0J062 215 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 Q6ZR54 194 aa10.56□□□□□ -0.72
ARHGEF28-203ENST00000426542 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
ARHGEF28-203ENST00000426542 H3BS24 57 aa10.52□□□□□ -0.72
ARHGEF28-203ENST00000426542 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
ARHGEF28-203ENST00000426542 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 OXTP01178 125 aa10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 C5orf42Q9H799 3197 aa10.49□□□□□ -0.73
ARHGEF28-203ENST00000426542 PLAC4Q8WY50 150 aa10.48□□□□□ -0.73
ARHGEF28-203ENST00000426542 MAST4O15021 2626 aa10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 HELZ2Q9BYK8 2649 aaKnown RBP10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 A0A087X002 238 aa10.47□□□□□ -0.73
ARHGEF28-203ENST00000426542 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
ARHGEF28-203ENST00000426542 UTRNP46939 3433 aa10.45□□□□□ -0.74
ARHGEF28-203ENST00000426542 KRTAP29-1A8MX34 341 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF28-203ENST00000426542 NOTCH2NLQ7Z3S9 236 aa10.37□□□□□ -0.75
ARHGEF28-203ENST00000426542 CFAP46Q8IYW2 2715 aa10.37□□□□□ -0.75
ARHGEF28-203ENST00000426542 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
ARHGEF28-203ENST00000426542 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
ARHGEF28-203ENST00000426542 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
ARHGEF28-203ENST00000426542 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
ARHGEF28-203ENST00000426542 STAB1Q9NY15 2570 aa10.22□□□□□ -0.77
ARHGEF28-203ENST00000426542 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
ARHGEF28-203ENST00000426542 RPS29P62273 56 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-203ENST00000426542 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
ARHGEF28-203ENST00000426542 A8MU10 97 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 A8MUU9 505 aa10.18□□□□□ -0.78
ARHGEF28-203ENST00000426542 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
ARHGEF28-203ENST00000426542 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.78
ARHGEF28-203ENST00000426542 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
ARHGEF28-203ENST00000426542 CFAP54Q96N23 3096 aa10.11□□□□□ -0.79
ARHGEF28-203ENST00000426542 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
ARHGEF28-203ENST00000426542 CENPEQ02224 2701 aa10.09□□□□□ -0.79
ARHGEF28-203ENST00000426542 KRTAP25-1Q3LHN0 102 aa10.08□□□□□ -0.8
ARHGEF28-203ENST00000426542 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 CHD9Q3L8U1 2897 aa10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 C20orf166-AS1Q96NR2 134 aa10.06□□□□□ -0.8
ARHGEF28-203ENST00000426542 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
ARHGEF28-203ENST00000426542 PCNTO95613 3336 aa10.05□□□□□ -0.8
ARHGEF28-203ENST00000426542 A6NN06 94 aa10.02□□□□□ -0.81
ARHGEF28-203ENST00000426542 GCN1Q92616 2671 aaKnown RBP10.01□□□□□ -0.81
ARHGEF28-203ENST00000426542 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
ARHGEF28-203ENST00000426542 TEP1Q99973 2627 aaKnown RBP9.99□□□□□ -0.81
ARHGEF28-203ENST00000426542 UNC79Q9P2D8 2635 aa9.97□□□□□ -0.81
ARHGEF28-203ENST00000426542 A0A0C4DFX4 3053 aa9.96□□□□□ -0.81
ARHGEF28-203ENST00000426542 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
ARHGEF28-203ENST00000426542 MKI67P46013 3256 aaKnown RBP9.91□□□□□ -0.82
ARHGEF28-203ENST00000426542 HTTP42858 3142 aa9.9□□□□□ -0.82
ARHGEF28-203ENST00000426542 COL6A5A8TX70 2615 aa9.89□□□□□ -0.83
ARHGEF28-203ENST00000426542 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
ARHGEF28-203ENST00000426542 NBEAL2Q6ZNJ1 2754 aa9.85□□□□□ -0.83
ARHGEF28-203ENST00000426542 TNP1P09430 55 aa9.85□□□□□ -0.83
ARHGEF28-203ENST00000426542 RANBP2P49792 3224 aaKnown RBP9.82□□□□□ -0.84
ARHGEF28-203ENST00000426542 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
ARHGEF28-203ENST00000426542 NDUFAF8A1L188 74 aa9.8□□□□□ -0.84
ARHGEF28-203ENST00000426542 TRANK1O15050 2925 aa9.78□□□□□ -0.84
ARHGEF28-203ENST00000426542 ZNF292O60281 2723 aa9.78□□□□□ -0.84
ARHGEF28-203ENST00000426542 LAMA3Q16787 3333 aa9.77□□□□□ -0.85
ARHGEF28-203ENST00000426542 WDFY4Q6ZS81 3184 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 TRIOO75962 3097 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
ARHGEF28-203ENST00000426542 STAB2Q8WWQ8 2551 aa9.74□□□□□ -0.85
ARHGEF28-203ENST00000426542 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.85
ARHGEF28-203ENST00000426542 LAMA2P24043 3122 aaKnown RBP9.7□□□□□ -0.86
ARHGEF28-203ENST00000426542 IGSF10Q6WRI0 2623 aa9.65□□□□□ -0.86
ARHGEF28-203ENST00000426542 ITPR2Q14571 2701 aa9.65□□□□□ -0.87
ARHGEF28-203ENST00000426542 FRYQ5TBA9 3013 aa9.63□□□□□ -0.87
ARHGEF28-203ENST00000426542 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
ARHGEF28-203ENST00000426542 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
ARHGEF28-203ENST00000426542 BRCA2P51587 3418 aa9.62□□□□□ -0.87
ARHGEF28-203ENST00000426542 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
ARHGEF28-203ENST00000426542 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF28-203ENST00000426542 KRTAP10-8P60410 259 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 XP32Q5T750 250 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
ARHGEF28-203ENST00000426542 NSD1Q96L73 2696 aaPredicted RBP9.57□□□□□ -0.88
ARHGEF28-203ENST00000426542 XIRP2A4UGR9 3374 aa9.57□□□□□ -0.88
ARHGEF28-203ENST00000426542 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
ARHGEF28-203ENST00000426542 UNC80Q8N2C7 3258 aa9.53□□□□□ -0.88
ARHGEF28-203ENST00000426542 MAP1AP78559 2803 aaPredicted RBP9.51□□□□□ -0.89
ARHGEF28-203ENST00000426542 KMT2BQ9UMN6 2715 aaPredicted RBP9.5□□□□□ -0.89
ARHGEF28-203ENST00000426542 CELSR3Q9NYQ7 3312 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 FREM2Q5SZK8 3169 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
ARHGEF28-203ENST00000426542 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
ARHGEF28-203ENST00000426542 KALRNO60229 2985 aa9.43□□□□□ -0.9
ARHGEF28-203ENST00000426542 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms