RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SSBP3-AS1Q7Z2R9 100 aa14.21□□□□□ -0.13
APOE-202ENST00000425718 C9orf118A6NHY6 69 aa14.2□□□□□ -0.14
APOE-202ENST00000425718 TRACP01848 142 aa14.2□□□□□ -0.14
APOE-202ENST00000425718 Q8N377 158 aa14.2□□□□□ -0.14
APOE-202ENST00000425718 TNXBP22105 4242 aa14.2□□□□□ -0.14
APOE-202ENST00000425718 IGLV9-49A0A0B4J1Y8 123 aa14.19□□□□□ -0.14
APOE-202ENST00000425718 LST1O00453 97 aa14.19□□□□□ -0.14
APOE-202ENST00000425718 F8WEM9 126 aa14.18□□□□□ -0.14
APOE-202ENST00000425718 C9orf153Q5TBE3 101 aa14.18□□□□□ -0.14
APOE-202ENST00000425718 C3orf22Q8N5N4 141 aa14.18□□□□□ -0.14
APOE-202ENST00000425718 Q8NBF4 154 aa14.18□□□□□ -0.14
APOE-202ENST00000425718 TAX1BP3O14907 124 aa14.17□□□□□ -0.14
APOE-202ENST00000425718 ATXN8Q156A1 80 aa14.17□□□□□ -0.14
APOE-202ENST00000425718 ORMDL1Q9P0S3 153 aa14.17□□□□□ -0.14
APOE-202ENST00000425718 TRBV20-1A0A075B6N2 111 aa14.16□□□□□ -0.14
APOE-202ENST00000425718 H3BUT2 72 aa14.16□□□□□ -0.14
APOE-202ENST00000425718 MOBPQ13875 183 aa14.15□□□□□ -0.14
APOE-202ENST00000425718 SPAG11AQ6PDA7 123 aa14.14□□□□□ -0.15
APOE-202ENST00000425718 LINC00304Q8N9R0 145 aa14.13□□□□□ -0.15
APOE-202ENST00000425718 NAA38Q9BRA0 125 aaKnown RBP14.13□□□□□ -0.15
APOE-202ENST00000425718 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
APOE-202ENST00000425718 SMIM29Q86T20 159 aa14.12□□□□□ -0.15
APOE-202ENST00000425718 TMEM256-PLSCR3K7ERE1 68 aa14.11□□□□□ -0.15
APOE-202ENST00000425718 FABP2P12104 132 aa14.11□□□□□ -0.15
APOE-202ENST00000425718 A0A1W2PPM0 123 aa14.09□□□□□ -0.15
APOE-202ENST00000425718 TCL1BO95988 128 aa14.08□□□□□ -0.16
APOE-202ENST00000425718 Q6JHZ5 121 aa14.06□□□□□ -0.16
APOE-202ENST00000425718 IGLV8-61A0A075B6I0 122 aa14.03□□□□□ -0.16
APOE-202ENST00000425718 NDUFV3P56181 108 aaKnown RBP14.03□□□□□ -0.16
APOE-202ENST00000425718 SPINK1P00995 79 aa14.02□□□□□ -0.17
APOE-202ENST00000425718 UBE2V1Q13404 147 aa14.02□□□□□ -0.17
APOE-202ENST00000425718 RPS29P62273 56 aaKnown RBP14□□□□□ -0.17
APOE-202ENST00000425718 CD164Q04900 197 aa14□□□□□ -0.17
APOE-202ENST00000425718 BAALC-AS2P0C853 105 aa13.98□□□□□ -0.17
APOE-202ENST00000425718 SPCS1Q9Y6A9 102 aa13.96□□□□□ -0.17
APOE-202ENST00000425718 H3BMG7 143 aa13.95□□□□□ -0.18
APOE-202ENST00000425718 C9JAW5 83 aa13.92□□□□□ -0.18
APOE-202ENST00000425718 ANKRD29Q8N6D5 301 aa13.92□□□□□ -0.18
APOE-202ENST00000425718 LIMD2Q9BT23 127 aa13.92□□□□□ -0.18
APOE-202ENST00000425718 H3BT86 120 aa13.89□□□□□ -0.19
APOE-202ENST00000425718 IGFL1Q6UW32 110 aa13.89□□□□□ -0.19
APOE-202ENST00000425718 GTF2H5Q6ZYL4 71 aa13.88□□□□□ -0.19
APOE-202ENST00000425718 JMJD7-PLA2G4BH0Y9G9 81 aa13.87□□□□□ -0.19
APOE-202ENST00000425718 RBM3P98179 157 aaKnown RBP13.86□□□□□ -0.19
APOE-202ENST00000425718 K7EP34 96 aa13.85□□□□□ -0.19
APOE-202ENST00000425718 HRCT1Q6UXD1 115 aa13.84□□□□□ -0.19
APOE-202ENST00000425718 Q6Q795 121 aa13.83□□□□□ -0.2
APOE-202ENST00000425718 DSCR8Q96T75 97 aa13.83□□□□□ -0.2
APOE-202ENST00000425718 Q5XG85 94 aa13.82□□□□□ -0.2
APOE-202ENST00000425718 TEN1Q86WV5 123 aa13.82□□□□□ -0.2
APOE-202ENST00000425718 C21orf62-AS1Q17RA5 79 aa13.81□□□□□ -0.2
APOE-202ENST00000425718 HERC1Q15751 4861 aa13.78□□□□□ -0.2
APOE-202ENST00000425718 TRBV7-7A0A0K0K1E9 115 aa13.78□□□□□ -0.2
APOE-202ENST00000425718 PDE6GP18545 87 aa13.77□□□□□ -0.21
APOE-202ENST00000425718 A0A0G2JQZ4 141 aa13.76□□□□□ -0.21
APOE-202ENST00000425718 TRBV7-4A0A0J9YYF1 115 aa13.76□□□□□ -0.21
APOE-202ENST00000425718 SS18L2Q9UHA2 77 aa13.76□□□□□ -0.21
APOE-202ENST00000425718 A0A1B0GV72 72 aa13.75□□□□□ -0.21
APOE-202ENST00000425718 FP248Q71RG6 208 aaPredicted RBP13.75□□□□□ -0.21
APOE-202ENST00000425718 CCKP06307 115 aa13.71□□□□□ -0.21
APOE-202ENST00000425718 PRR4Q16378 134 aa13.71□□□□□ -0.21
APOE-202ENST00000425718 ASB16-AS1Q495Z4 193 aa13.7□□□□□ -0.22
APOE-202ENST00000425718 MTURNQ8N3F0 131 aa13.7□□□□□ -0.22
APOE-202ENST00000425718 OBSCN-AS1Q96MR7 158 aa13.7□□□□□ -0.22
APOE-202ENST00000425718 LOC110117498A0A087WWA1 95 aa13.69□□□□□ -0.22
APOE-202ENST00000425718 A0A1W2PNM2 257 aa13.68□□□□□ -0.22
APOE-202ENST00000425718 A0A1B0GW54 56 aa13.67□□□□□ -0.22
APOE-202ENST00000425718 F8W1H4 67 aa13.67□□□□□ -0.22
APOE-202ENST00000425718 RETNLBQ9BQ08 111 aa13.66□□□□□ -0.22
APOE-202ENST00000425718 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
APOE-202ENST00000425718 VPS25Q9BRG1 176 aa13.64□□□□□ -0.23
APOE-202ENST00000425718 A0A087WSZ3 146 aa13.63□□□□□ -0.23
APOE-202ENST00000425718 Q6ZQT0 140 aa13.63□□□□□ -0.23
APOE-202ENST00000425718 C14orf132Q9NPU4 83 aa13.62□□□□□ -0.23
APOE-202ENST00000425718 IGLV7-46A0A075B6I9 117 aa13.61□□□□□ -0.23
APOE-202ENST00000425718 SMCPP49901 116 aaPredicted RBP13.6□□□□□ -0.23
APOE-202ENST00000425718 C1orf195Q5TG92 126 aa13.57□□□□□ -0.24
APOE-202ENST00000425718 TPRXLQ17RH7 258 aa13.53□□□□□ -0.24
APOE-202ENST00000425718 HMCN2Q8NDA2 5059 aa13.49□□□□□ -0.25
APOE-202ENST00000425718 A0A1B0GV90 55 aa13.49□□□□□ -0.25
APOE-202ENST00000425718 ETDBQ3ZM63 59 aa13.44□□□□□ -0.26
APOE-202ENST00000425718 J3KT08 172 aa13.4□□□□□ -0.26
APOE-202ENST00000425718 KRTAP13-3Q3SY46 172 aa13.4□□□□□ -0.26
APOE-202ENST00000425718 Q96NJ1 140 aa13.4□□□□□ -0.26
APOE-202ENST00000425718 CDIP1Q9H305 208 aa13.4□□□□□ -0.26
APOE-202ENST00000425718 LINC00472Q9H8W2 130 aa13.39□□□□□ -0.27
APOE-202ENST00000425718 NREPQ16612 68 aa13.37□□□□□ -0.27
APOE-202ENST00000425718 IGKV4-1P06312 121 aa13.36□□□□□ -0.27
APOE-202ENST00000425718 SIGMAR1Q99720 223 aa13.36□□□□□ -0.27
APOE-202ENST00000425718 LRP2P98164 4655 aa13.28□□□□□ -0.28
APOE-202ENST00000425718 NDUFB1O75438 58 aa13.27□□□□□ -0.29
APOE-202ENST00000425718 UBL5Q9BZL1 73 aa13.27□□□□□ -0.29
APOE-202ENST00000425718 LPAP08519 4548 aa13.26□□□□□ -0.29
APOE-202ENST00000425718 C9orf92A6NGG3 77 aa13.25□□□□□ -0.29
APOE-202ENST00000425718 DEFB116Q30KQ4 102 aa13.25□□□□□ -0.29
APOE-202ENST00000425718 ACYP1P07311 99 aa13.24□□□□□ -0.29
APOE-202ENST00000425718 Q6ZVQ6 151 aa13.21□□□□□ -0.29
APOE-202ENST00000425718 C8orf87E5RJ46 101 aa13.2□□□□□ -0.3
APOE-202ENST00000425718 XP32Q5T750 250 aa13.2□□□□□ -0.3
APOE-202ENST00000425718 FAM240AA0A1B0GVK7 77 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms