RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TRBV20-1A0A075B6N2 111 aa6.47□□□□□ -1.37
HLA-DQB3-203ENST00000425319 TRAV13-2A0A0B4J235 113 aa6.47□□□□□ -1.37
HLA-DQB3-203ENST00000425319 Q6JHZ5 121 aa6.47□□□□□ -1.37
HLA-DQB3-203ENST00000425319 C20orf202A1L168 122 aa6.46□□□□□ -1.38
HLA-DQB3-203ENST00000425319 SMIM6P0DI80 62 aa6.46□□□□□ -1.38
HLA-DQB3-203ENST00000425319 KRTDAPP60985 99 aa6.45□□□□□ -1.38
HLA-DQB3-203ENST00000425319 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
HLA-DQB3-203ENST00000425319 C3orf79P0CE67 100 aa6.43□□□□□ -1.38
HLA-DQB3-203ENST00000425319 PYY3Q5JQD4 70 aa6.43□□□□□ -1.38
HLA-DQB3-203ENST00000425319 LINC01545Q5VT33 79 aa6.43□□□□□ -1.38
HLA-DQB3-203ENST00000425319 SCGB1D1O95968 90 aa6.42□□□□□ -1.38
HLA-DQB3-203ENST00000425319 Q75L30 129 aa6.42□□□□□ -1.38
HLA-DQB3-203ENST00000425319 LST1O00453 97 aa6.41□□□□□ -1.38
HLA-DQB3-203ENST00000425319 MUSTN1Q8IVN3 82 aa6.41□□□□□ -1.38
HLA-DQB3-203ENST00000425319 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
HLA-DQB3-203ENST00000425319 OBSCN-AS1Q96MR7 158 aa6.41□□□□□ -1.38
HLA-DQB3-203ENST00000425319 TRBV7-7A0A0K0K1E9 115 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 hADV29S1A0JD25 119 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 SNCGO76070 127 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 Q96NJ1 140 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 C12orf57Q99622 126 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 SNHG12Q9BXW3 62 aa6.4□□□□□ -1.38
HLA-DQB3-203ENST00000425319 KRTAP9-7A8MTY7 169 aa6.39□□□□□ -1.39
HLA-DQB3-203ENST00000425319 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
HLA-DQB3-203ENST00000425319 SMIM11BQ8TCY0 68 aa6.39□□□□□ -1.39
HLA-DQB3-203ENST00000425319 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
HLA-DQB3-203ENST00000425319 SS18L2Q9UHA2 77 aa6.38□□□□□ -1.39
HLA-DQB3-203ENST00000425319 LINC00575Q6W349 94 aa6.36□□□□□ -1.39
HLA-DQB3-203ENST00000425319 Q6ZQY7 126 aa6.36□□□□□ -1.39
HLA-DQB3-203ENST00000425319 PPDPFLQ8WWR9 84 aa6.36□□□□□ -1.39
HLA-DQB3-203ENST00000425319 IGFL1Q6UW32 110 aa6.35□□□□□ -1.39
HLA-DQB3-203ENST00000425319 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
HLA-DQB3-203ENST00000425319 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
HLA-DQB3-203ENST00000425319 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
HLA-DQB3-203ENST00000425319 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
HLA-DQB3-203ENST00000425319 FAM236DA0A1B0GTK5 79 aa6.33□□□□□ -1.4
HLA-DQB3-203ENST00000425319 HSBP1L1C9JCN9 74 aa6.33□□□□□ -1.4
HLA-DQB3-203ENST00000425319 FAM236CP0DP71 79 aa6.33□□□□□ -1.4
HLA-DQB3-203ENST00000425319 BVES-AS1Q5T3Y7 98 aa6.33□□□□□ -1.4
HLA-DQB3-203ENST00000425319 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
HLA-DQB3-203ENST00000425319 GHRHP01286 108 aa6.32□□□□□ -1.4
HLA-DQB3-203ENST00000425319 PAM16Q9Y3D7 125 aa6.31□□□□□ -1.4
HLA-DQB3-203ENST00000425319 TSTD3H0UI37 97 aa6.3□□□□□ -1.4
HLA-DQB3-203ENST00000425319 SPATA45Q537H7 98 aa6.3□□□□□ -1.4
HLA-DQB3-203ENST00000425319 RBM12B-AS1Q9P1G2 102 aa6.3□□□□□ -1.4
HLA-DQB3-203ENST00000425319 ANKRD39Q53RE8 183 aa6.28□□□□□ -1.4
HLA-DQB3-203ENST00000425319 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
HLA-DQB3-203ENST00000425319 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
HLA-DQB3-203ENST00000425319 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
HLA-DQB3-203ENST00000425319 A8MUU9 505 aa6.25□□□□□ -1.41
HLA-DQB3-203ENST00000425319 MTURNQ8N3F0 131 aa6.25□□□□□ -1.41
HLA-DQB3-203ENST00000425319 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
HLA-DQB3-203ENST00000425319 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
HLA-DQB3-203ENST00000425319 PCP4L1A6NKN8 68 aa6.24□□□□□ -1.41
HLA-DQB3-203ENST00000425319 H3BUT2 72 aa6.23□□□□□ -1.41
HLA-DQB3-203ENST00000425319 COX8AP10176 69 aa6.23□□□□□ -1.41
HLA-DQB3-203ENST00000425319 LINC00313P59037 77 aa6.23□□□□□ -1.41
HLA-DQB3-203ENST00000425319 C14orf144Q96I85 54 aa6.23□□□□□ -1.41
HLA-DQB3-203ENST00000425319 H0YGX0 51 aa6.22□□□□□ -1.41
HLA-DQB3-203ENST00000425319 DLEU1O43261 78 aa6.21□□□□□ -1.42
HLA-DQB3-203ENST00000425319 HIST1H4GQ99525 98 aa6.21□□□□□ -1.42
HLA-DQB3-203ENST00000425319 A0A087WSZ3 146 aa6.2□□□□□ -1.42
HLA-DQB3-203ENST00000425319 NDUFV3P56181 108 aaKnown RBP6.2□□□□□ -1.42
HLA-DQB3-203ENST00000425319 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
HLA-DQB3-203ENST00000425319 DSCR10P59022 87 aa6.19□□□□□ -1.42
HLA-DQB3-203ENST00000425319 RAB37Q96AX2 223 aa6.19□□□□□ -1.42
HLA-DQB3-203ENST00000425319 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
HLA-DQB3-203ENST00000425319 H3BMG7 143 aa6.18□□□□□ -1.42
HLA-DQB3-203ENST00000425319 FABP2P12104 132 aa6.17□□□□□ -1.42
HLA-DQB3-203ENST00000425319 C2orf91Q6ZV80 131 aa6.16□□□□□ -1.42
HLA-DQB3-203ENST00000425319 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
HLA-DQB3-203ENST00000425319 IGKV4-1P06312 121 aa6.15□□□□□ -1.42
HLA-DQB3-203ENST00000425319 MT2AP02795 61 aa6.14□□□□□ -1.43
HLA-DQB3-203ENST00000425319 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
HLA-DQB3-203ENST00000425319 A0A1B0GX51 115 aa6.13□□□□□ -1.43
HLA-DQB3-203ENST00000425319 H3BQ85 93 aa6.13□□□□□ -1.43
HLA-DQB3-203ENST00000425319 HSD52Q0P140 79 aa6.13□□□□□ -1.43
HLA-DQB3-203ENST00000425319 M0R143 59 aa6.12□□□□□ -1.43
HLA-DQB3-203ENST00000425319 ANKRD29Q8N6D5 301 aa6.12□□□□□ -1.43
HLA-DQB3-203ENST00000425319 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
HLA-DQB3-203ENST00000425319 DNAL4O96015 105 aa6.09□□□□□ -1.43
HLA-DQB3-203ENST00000425319 BATFQ16520 125 aa6.08□□□□□ -1.44
HLA-DQB3-203ENST00000425319 CEND1Q8N111 149 aa6.08□□□□□ -1.44
HLA-DQB3-203ENST00000425319 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
HLA-DQB3-203ENST00000425319 LCE2BO14633 110 aa6.07□□□□□ -1.44
HLA-DQB3-203ENST00000425319 MT1FP04733 61 aa6.07□□□□□ -1.44
HLA-DQB3-203ENST00000425319 USH2AO75445 5202 aa6.07□□□□□ -1.44
HLA-DQB3-203ENST00000425319 A0A0B4J2C4 111 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 TMEM238LA0A1B0GVL6 79 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 A6NJY4 79 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 TRACP01848 142 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 HRES1P13985 223 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
HLA-DQB3-203ENST00000425319 COL5A1-AS1Q5SY13 56 aa6.05□□□□□ -1.44
HLA-DQB3-203ENST00000425319 MPLKIPQ8TAP9 179 aa6.05□□□□□ -1.44
HLA-DQB3-203ENST00000425319 A0A1W2PNM2 257 aa6.04□□□□□ -1.44
HLA-DQB3-203ENST00000425319 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
HLA-DQB3-203ENST00000425319 A8MWP4 228 aa6.04□□□□□ -1.44
HLA-DQB3-203ENST00000425319 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms