RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 LINC00472Q9H8W2 130 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 CEP250Q9BV73 2442 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 APC2O95996 2303 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 CFAP54Q96N23 3096 aa1.51□□□□□ -2.17
LINC01040-201ENST00000425048 ABCA2Q9BZC7 2435 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 HELZ2Q9BYK8 2649 aaKnown RBP1.5□□□□□ -2.17
LINC01040-201ENST00000425048 IGLV10-54A0A075B6I4 117 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 MMP24-AS1A0A0U1RRL7 71 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 A8MWP4 228 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 UQCR11O14957 56 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 HTN1P15515 57 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 RPL37AP61513 92 aaKnown RBP1.5□□□□□ -2.17
LINC01040-201ENST00000425048 PCOTHQ58A44 107 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 CLPSL2Q6UWE3 100 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 WFDC10BQ8IUB3 73 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 WNK1Q9H4A3 2382 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 LAMA2P24043 3122 aaKnown RBP1.5□□□□□ -2.17
LINC01040-201ENST00000425048 CACNA1BQ00975 2339 aa1.5□□□□□ -2.17
LINC01040-201ENST00000425048 ZFHX2Q9C0A1 2572 aaPredicted RBP1.5□□□□□ -2.17
LINC01040-201ENST00000425048 A0A087WTM6 91 aa1.49□□□□□ -2.17
LINC01040-201ENST00000425048 TRGV1A0A0A0MS02 117 aa1.49□□□□□ -2.17
LINC01040-201ENST00000425048 MSMBP08118 114 aa1.49□□□□□ -2.17
LINC01040-201ENST00000425048 C6orf48Q9UBA6 75 aa1.49□□□□□ -2.17
LINC01040-201ENST00000425048 ITPR3Q14573 2671 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 PCLOQ9Y6V0 5065 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 A0A1B0GU69 56 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 A0A1B0GVX0 72 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 NUPR2A6NF83 97 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 DEFB131AP59861 70 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 DEFB109BQ30KR1 87 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 DEFB105AQ8NG35 78 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 DMAC1Q96GE9 116 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 FASNP49327 2511 aaKnown RBP1.48□□□□□ -2.17
LINC01040-201ENST00000425048 RANBP2P49792 3224 aaKnown RBP1.48□□□□□ -2.17
LINC01040-201ENST00000425048 ZZEF1O43149 2961 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 ZNF292O60281 2723 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 VCANP13611 3396 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 HECTD1Q9ULT8 2610 aa1.48□□□□□ -2.17
LINC01040-201ENST00000425048 CNOT1A5YKK6 2376 aaKnown RBP1.48□□□□□ -2.17
LINC01040-201ENST00000425048 DOPEY1Q5JWR5 2465 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 SPRR1AP35321 89 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 LUZP6Q538Z0 58 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 TMEM105Q8N8V8 129 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 TP53AIP1Q9HCN2 124 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 C8orf17Q9NRJ1 99 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 XIRP2A4UGR9 3374 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 GCN1Q92616 2671 aaKnown RBP1.47□□□□□ -2.17
LINC01040-201ENST00000425048 VPS13AQ96RL7 3174 aa1.47□□□□□ -2.17
LINC01040-201ENST00000425048 A0A0G2JQZ4 141 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 A0A1W2PNN7 141 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
LINC01040-201ENST00000425048 IGLV7-43P04211 117 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 ACYP2P14621 99 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 Q6ZRX8 168 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 CAMK2N2Q96S95 79 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 PTPRZ1P23471 2315 aaPredicted RBP1.46□□□□□ -2.18
LINC01040-201ENST00000425048 CELSR3Q9NYQ7 3312 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 CHD7Q9P2D1 2997 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 NCOR1O75376 2440 aa1.46□□□□□ -2.18
LINC01040-201ENST00000425048 ROS1P08922 2347 aa1.45□□□□□ -2.18
LINC01040-201ENST00000425048 ACACAQ13085 2346 aa1.45□□□□□ -2.18
LINC01040-201ENST00000425048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.45□□□□□ -2.18
LINC01040-201ENST00000425048 CCL19Q99731 98 aa1.45□□□□□ -2.18
LINC01040-201ENST00000425048 NOP10Q9NPE3 64 aaKnown RBP1.45□□□□□ -2.18
LINC01040-201ENST00000425048 DCHS1Q96JQ0 3298 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 AKAP6Q13023 2319 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 EP300Q09472 2414 aaPredicted RBP1.44□□□□□ -2.18
LINC01040-201ENST00000425048 DEFB136Q30KP8 78 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 Q96NJ1 140 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 DMDP11532 3685 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 NBEAQ8NFP9 2946 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 WDFY4Q6ZS81 3184 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 IGF2RP11717 2491 aa1.44□□□□□ -2.18
LINC01040-201ENST00000425048 PRUNE2Q8WUY3 3088 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 H0YAA0 97 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 K7EIL1 84 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 TPRXLQ17RH7 258 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 CIRBP-AS1Q8TBR5 109 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 ABCA12Q86UK0 2595 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 C5orf42Q9H799 3197 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 WDFY3Q8IZQ1 3526 aa1.43□□□□□ -2.18
LINC01040-201ENST00000425048 MUC3AQ02505 3323 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 EP400Q96L91 3159 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 NBDYA0A0U1RRE5 68 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 K7ERS5 55 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 SPINT4Q6UDR6 99 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 MRPL34Q9BQ48 92 aaKnown RBP1.42□□□□□ -2.18
LINC01040-201ENST00000425048 CRIPTQ9P021 101 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 KALRNO60229 2985 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 ZDBF2Q9HCK1 2354 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 CSMD1Q96PZ7 3565 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 TENM2Q9NT68 2774 aa1.42□□□□□ -2.18
LINC01040-201ENST00000425048 AKAP9Q99996 3911 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 SPTBN4Q9H254 2564 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 H3BUX3 64 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 LY6G6CO95867 125 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 SPRR1BP22528 89 aa1.41□□□□□ -2.18
LINC01040-201ENST00000425048 Q6ZSA8 131 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms