RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 LINC00588Q9Y4M8 146 aa7.03□□□□□ -1.28
LIMS1-207ENST00000422797 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
LIMS1-207ENST00000422797 K7EQZ3 153 aa7.02□□□□□ -1.29
LIMS1-207ENST00000422797 MP68P56378 58 aa7.02□□□□□ -1.29
LIMS1-207ENST00000422797 Q1T7F1 81 aa7.02□□□□□ -1.29
LIMS1-207ENST00000422797 PSCAO43653 123 aa7.01□□□□□ -1.29
LIMS1-207ENST00000422797 V9GYY9 64 aa7.01□□□□□ -1.29
LIMS1-207ENST00000422797 CUBNO60494 3623 aa7.01□□□□□ -1.29
LIMS1-207ENST00000422797 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
LIMS1-207ENST00000422797 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
LIMS1-207ENST00000422797 ATRQ13535 2644 aa7□□□□□ -1.29
LIMS1-207ENST00000422797 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
LIMS1-207ENST00000422797 C16orf90A8MZG2 172 aa7□□□□□ -1.29
LIMS1-207ENST00000422797 CNBPP62633 177 aaKnown RBP7□□□□□ -1.29
LIMS1-207ENST00000422797 IGFL1Q6UW32 110 aa7□□□□□ -1.29
LIMS1-207ENST00000422797 H0Y9J4 135 aa6.99□□□□□ -1.29
LIMS1-207ENST00000422797 C14orf177Q52M58 125 aa6.99□□□□□ -1.29
LIMS1-207ENST00000422797 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
LIMS1-207ENST00000422797 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
LIMS1-207ENST00000422797 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
LIMS1-207ENST00000422797 SPRR1BP22528 89 aa6.98□□□□□ -1.29
LIMS1-207ENST00000422797 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
LIMS1-207ENST00000422797 C1orf64Q8NEQ6 169 aa6.97□□□□□ -1.29
LIMS1-207ENST00000422797 UBE2AP49459 152 aa6.96□□□□□ -1.3
LIMS1-207ENST00000422797 CASC10Q5T4H9 136 aa6.96□□□□□ -1.3
LIMS1-207ENST00000422797 TRAV22A0A0B4J277 110 aa6.95□□□□□ -1.3
LIMS1-207ENST00000422797 VWFP04275 2813 aa6.95□□□□□ -1.3
LIMS1-207ENST00000422797 A0A087WSZ3 146 aa6.94□□□□□ -1.3
LIMS1-207ENST00000422797 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
LIMS1-207ENST00000422797 A8MWP4 228 aa6.92□□□□□ -1.3
LIMS1-207ENST00000422797 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
LIMS1-207ENST00000422797 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
LIMS1-207ENST00000422797 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
LIMS1-207ENST00000422797 KRTAP4-2Q9BYR5 136 aa6.92□□□□□ -1.3
LIMS1-207ENST00000422797 A0A096LNI7 61 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 WFDC13Q8IUB5 93 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 B9D2Q9BPU9 175 aa6.91□□□□□ -1.3
LIMS1-207ENST00000422797 PRLHP81277 87 aa6.9□□□□□ -1.31
LIMS1-207ENST00000422797 H0Y9P7 68 aa6.89□□□□□ -1.31
LIMS1-207ENST00000422797 KRTAP24-1Q3LI83 254 aa6.88□□□□□ -1.31
LIMS1-207ENST00000422797 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
LIMS1-207ENST00000422797 LINC00472Q9H8W2 130 aa6.88□□□□□ -1.31
LIMS1-207ENST00000422797 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
LIMS1-207ENST00000422797 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
LIMS1-207ENST00000422797 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
LIMS1-207ENST00000422797 LIMD2Q9BT23 127 aa6.86□□□□□ -1.31
LIMS1-207ENST00000422797 TENM1Q9UKZ4 2725 aa6.86□□□□□ -1.31
LIMS1-207ENST00000422797 TP53AIP1Q9HCN2 124 aa6.86□□□□□ -1.31
LIMS1-207ENST00000422797 MOBPQ13875 183 aa6.84□□□□□ -1.31
LIMS1-207ENST00000422797 DEFB116Q30KQ4 102 aa6.83□□□□□ -1.32
LIMS1-207ENST00000422797 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
LIMS1-207ENST00000422797 ANK2Q01484 3957 aa6.83□□□□□ -1.32
LIMS1-207ENST00000422797 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
LIMS1-207ENST00000422797 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
LIMS1-207ENST00000422797 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
LIMS1-207ENST00000422797 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
LIMS1-207ENST00000422797 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
LIMS1-207ENST00000422797 PRR4Q16378 134 aa6.8□□□□□ -1.32
LIMS1-207ENST00000422797 ZNF706Q9Y5V0 76 aaPredicted RBP6.8□□□□□ -1.32
LIMS1-207ENST00000422797 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
LIMS1-207ENST00000422797 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
LIMS1-207ENST00000422797 K7EIL1 84 aa6.79□□□□□ -1.32
LIMS1-207ENST00000422797 KRTAP13-1Q8IUC0 172 aa6.79□□□□□ -1.32
LIMS1-207ENST00000422797 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
LIMS1-207ENST00000422797 PSPHP1O15172 72 aa6.78□□□□□ -1.32
LIMS1-207ENST00000422797 ASB16-AS1Q495Z4 193 aa6.78□□□□□ -1.32
LIMS1-207ENST00000422797 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
LIMS1-207ENST00000422797 APLNQ9ULZ1 77 aa6.76□□□□□ -1.33
LIMS1-207ENST00000422797 DNAH3Q8TD57 4116 aa6.76□□□□□ -1.33
LIMS1-207ENST00000422797 A8MUN3 132 aa6.76□□□□□ -1.33
LIMS1-207ENST00000422797 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
LIMS1-207ENST00000422797 Q5VV11 94 aa6.76□□□□□ -1.33
LIMS1-207ENST00000422797 Q6ZR54 194 aa6.75□□□□□ -1.33
LIMS1-207ENST00000422797 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
LIMS1-207ENST00000422797 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
LIMS1-207ENST00000422797 PMAIP1Q13794 54 aa6.74□□□□□ -1.33
LIMS1-207ENST00000422797 Q75L30 129 aa6.74□□□□□ -1.33
LIMS1-207ENST00000422797 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 CDK2AP2O75956 126 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 CHTF8P0CG12 524 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 COA5Q86WW8 74 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 C8orf17Q9NRJ1 99 aa6.73□□□□□ -1.33
LIMS1-207ENST00000422797 TRRAPQ9Y4A5 3859 aa6.72□□□□□ -1.33
LIMS1-207ENST00000422797 Q96NJ1 140 aa6.71□□□□□ -1.33
LIMS1-207ENST00000422797 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
LIMS1-207ENST00000422797 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
LIMS1-207ENST00000422797 CHKB-CPT1BH3BT56 60 aa6.71□□□□□ -1.34
LIMS1-207ENST00000422797 KRTAP5-3Q6L8H2 238 aa6.71□□□□□ -1.34
LIMS1-207ENST00000422797 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
LIMS1-207ENST00000422797 SPACA4Q8TDM5 124 aa6.7□□□□□ -1.34
LIMS1-207ENST00000422797 NUPR2A6NF83 97 aa6.69□□□□□ -1.34
LIMS1-207ENST00000422797 PRB2P02812 416 aaPredicted RBP6.68□□□□□ -1.34
LIMS1-207ENST00000422797 ATP11AUNQ6ZP68 121 aa6.67□□□□□ -1.34
LIMS1-207ENST00000422797 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
LIMS1-207ENST00000422797 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
LIMS1-207ENST00000422797 PKD1L1Q8TDX9 2849 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms