RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 M0R2T5 61 aa6.87□□□□□ -1.31
LINC00339-203ENST00000420503 TAL2Q16559 108 aa6.86□□□□□ -1.31
LINC00339-203ENST00000420503 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
LINC00339-203ENST00000420503 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
LINC00339-203ENST00000420503 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
LINC00339-203ENST00000420503 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
LINC00339-203ENST00000420503 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
LINC00339-203ENST00000420503 SPRR1BP22528 89 aa6.84□□□□□ -1.31
LINC00339-203ENST00000420503 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
LINC00339-203ENST00000420503 CEND1Q8N111 149 aa6.84□□□□□ -1.31
LINC00339-203ENST00000420503 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
LINC00339-203ENST00000420503 CFC1P0CG37 223 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 SMIM6P0DI80 62 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 Q1RN00 199 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 C12orf57Q99622 126 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 LIMD2Q9BT23 127 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 UQCR10Q9UDW1 63 aa6.83□□□□□ -1.32
LINC00339-203ENST00000420503 COX7BP24311 80 aa6.82□□□□□ -1.32
LINC00339-203ENST00000420503 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
LINC00339-203ENST00000420503 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
LINC00339-203ENST00000420503 A0A1B0GWB2 263 aa6.81□□□□□ -1.32
LINC00339-203ENST00000420503 FXYD2P54710 66 aa6.81□□□□□ -1.32
LINC00339-203ENST00000420503 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
LINC00339-203ENST00000420503 DHRS4-AS1Q9P1J3 65 aa6.81□□□□□ -1.32
LINC00339-203ENST00000420503 SSPOA2VEC9 5147 aa6.81□□□□□ -1.32
LINC00339-203ENST00000420503 HSD52Q0P140 79 aa6.8□□□□□ -1.32
LINC00339-203ENST00000420503 C1orf195Q5TG92 126 aa6.8□□□□□ -1.32
LINC00339-203ENST00000420503 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
LINC00339-203ENST00000420503 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
LINC00339-203ENST00000420503 USH2AO75445 5202 aa6.78□□□□□ -1.32
LINC00339-203ENST00000420503 LAMTOR3Q9UHA4 124 aa6.78□□□□□ -1.32
LINC00339-203ENST00000420503 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
LINC00339-203ENST00000420503 A6NJY4 79 aa6.77□□□□□ -1.33
LINC00339-203ENST00000420503 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
LINC00339-203ENST00000420503 RAB37Q96AX2 223 aa6.77□□□□□ -1.33
LINC00339-203ENST00000420503 PRO1933Q9H354 126 aa6.77□□□□□ -1.33
LINC00339-203ENST00000420503 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
LINC00339-203ENST00000420503 VAMP3Q15836 100 aa6.74□□□□□ -1.33
LINC00339-203ENST00000420503 BVES-AS1Q5T3Y7 98 aa6.74□□□□□ -1.33
LINC00339-203ENST00000420503 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
LINC00339-203ENST00000420503 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
LINC00339-203ENST00000420503 CD164Q04900 197 aa6.73□□□□□ -1.33
LINC00339-203ENST00000420503 NHP2Q9NX24 153 aaKnown RBP6.73□□□□□ -1.33
LINC00339-203ENST00000420503 Q5XG85 94 aa6.72□□□□□ -1.33
LINC00339-203ENST00000420503 K7ERJ3 54 aa6.71□□□□□ -1.34
LINC00339-203ENST00000420503 Q6Q795 121 aa6.71□□□□□ -1.34
LINC00339-203ENST00000420503 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
LINC00339-203ENST00000420503 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
LINC00339-203ENST00000420503 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 H0YGX0 51 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 TRIAP1O43715 76 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 Q6ZQY7 126 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 FAM218AQ96MZ4 157 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
LINC00339-203ENST00000420503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.66□□□□□ -1.34
LINC00339-203ENST00000420503 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
LINC00339-203ENST00000420503 M0R143 59 aa6.65□□□□□ -1.34
LINC00339-203ENST00000420503 A0A1B0GX51 115 aa6.64□□□□□ -1.35
LINC00339-203ENST00000420503 PPDPFLQ8WWR9 84 aa6.63□□□□□ -1.35
LINC00339-203ENST00000420503 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
LINC00339-203ENST00000420503 OBSCN-AS1Q96MR7 158 aa6.62□□□□□ -1.35
LINC00339-203ENST00000420503 PSMB2P49721 201 aa6.61□□□□□ -1.35
LINC00339-203ENST00000420503 OCIAD2Q56VL3 154 aa6.61□□□□□ -1.35
LINC00339-203ENST00000420503 COX6CP09669 75 aa6.6□□□□□ -1.35
LINC00339-203ENST00000420503 SNCGO76070 127 aa6.59□□□□□ -1.35
LINC00339-203ENST00000420503 TCL1BO95988 128 aa6.58□□□□□ -1.36
LINC00339-203ENST00000420503 LCE3BQ5TA77 95 aa6.58□□□□□ -1.36
LINC00339-203ENST00000420503 MT2AP02795 61 aa6.57□□□□□ -1.36
LINC00339-203ENST00000420503 Q75L30 129 aa6.57□□□□□ -1.36
LINC00339-203ENST00000420503 F8WEM9 126 aa6.56□□□□□ -1.36
LINC00339-203ENST00000420503 LST1O00453 97 aa6.56□□□□□ -1.36
LINC00339-203ENST00000420503 ATP11AUNQ6ZP68 121 aa6.56□□□□□ -1.36
LINC00339-203ENST00000420503 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
LINC00339-203ENST00000420503 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
LINC00339-203ENST00000420503 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
LINC00339-203ENST00000420503 NAA38Q9BRA0 125 aaKnown RBP6.55□□□□□ -1.36
LINC00339-203ENST00000420503 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
LINC00339-203ENST00000420503 DNAL4O96015 105 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 GHRHP01286 108 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 TRACP01848 142 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 MT1FP04733 61 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 SCGB1C2P0DMR2 95 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 NDUFV3P56181 108 aaKnown RBP6.54□□□□□ -1.36
LINC00339-203ENST00000420503 BATFQ16520 125 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 Q6JHZ5 121 aa6.54□□□□□ -1.36
LINC00339-203ENST00000420503 ORMDL1Q9P0S3 153 aa6.53□□□□□ -1.36
LINC00339-203ENST00000420503 H3BUT2 72 aa6.52□□□□□ -1.37
LINC00339-203ENST00000420503 Q96NJ1 140 aa6.52□□□□□ -1.37
LINC00339-203ENST00000420503 H3BQ85 93 aa6.51□□□□□ -1.37
LINC00339-203ENST00000420503 FABP2P12104 132 aa6.51□□□□□ -1.37
LINC00339-203ENST00000420503 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
LINC00339-203ENST00000420503 TAX1BP3O14907 124 aa6.5□□□□□ -1.37
LINC00339-203ENST00000420503 SYNE2Q8WXH0 6885 aaKnown RBP6.49□□□□□ -1.37
LINC00339-203ENST00000420503 H3BMG7 143 aa6.49□□□□□ -1.37
LINC00339-203ENST00000420503 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
LINC00339-203ENST00000420503 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
LINC00339-203ENST00000420503 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
LINC00339-203ENST00000420503 KRTAP16-1A8MUX0 517 aa6.48□□□□□ -1.37
LINC00339-203ENST00000420503 UBE2V1Q13404 147 aa6.48□□□□□ -1.37
LINC00339-203ENST00000420503 ATXN8Q156A1 80 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms