RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 HIVEP3Q5T1R4 2406 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 C3orf84H3BNL1 204 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 KRTAP10-8P60410 259 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 UBE2BP63146 152 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 LCA10Q71F78 164 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 PHF5AQ7RTV0 110 aaKnown RBP2.81□□□□□ -1.96
RFC4-204ENST00000417876 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 C9orf163Q8N9P6 203 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 GVINP1Q7Z2Y8 2422 aa2.81□□□□□ -1.96
RFC4-204ENST00000417876 A0A096LPF7 62 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 H3BPC8 53 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 K7EQZ3 153 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 NDUFB1O75438 58 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 RBM12B-AS1Q9P1G2 102 aa2.8□□□□□ -1.96
RFC4-204ENST00000417876 SPTA1P02549 2419 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 CSPG4Q6UVK1 2322 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 NDUFS5O43920 106 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 PRB1P04280 392 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 C1orf137Q5JT78 98 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 ATP11AUNQ6ZP68 121 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 B9D2Q9BPU9 175 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
RFC4-204ENST00000417876 AKAP9Q99996 3911 aa2.78□□□□□ -1.96
RFC4-204ENST00000417876 COL12A1Q99715 3063 aa2.78□□□□□ -1.96
RFC4-204ENST00000417876 IGFL1Q6UW32 110 aa2.78□□□□□ -1.96
RFC4-204ENST00000417876 Q6ZRX8 168 aa2.78□□□□□ -1.96
RFC4-204ENST00000417876 Q8NAQ8 132 aa2.78□□□□□ -1.96
RFC4-204ENST00000417876 NBPF19A0A087WUL8 3843 aa2.77□□□□□ -1.97
RFC4-204ENST00000417876 LINC00208Q96KT6 92 aa2.77□□□□□ -1.97
RFC4-204ENST00000417876 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
RFC4-204ENST00000417876 MAP1AP78559 2803 aaPredicted RBP2.76□□□□□ -1.97
RFC4-204ENST00000417876 CNBPP62633 177 aaKnown RBP2.76□□□□□ -1.97
RFC4-204ENST00000417876 CDC42SE1Q9NRR8 79 aa2.76□□□□□ -1.97
RFC4-204ENST00000417876 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
RFC4-204ENST00000417876 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
RFC4-204ENST00000417876 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
RFC4-204ENST00000417876 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
RFC4-204ENST00000417876 ASB16-AS1Q495Z4 193 aa2.75□□□□□ -1.97
RFC4-204ENST00000417876 FBN2P35556 2912 aa2.75□□□□□ -1.97
RFC4-204ENST00000417876 TTC28Q96AY4 2481 aa2.75□□□□□ -1.97
RFC4-204ENST00000417876 SETXQ7Z333 2677 aaKnown RBP2.75□□□□□ -1.97
RFC4-204ENST00000417876 MXRA5Q9NR99 2828 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 H3BNG1 76 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 MP68P56378 58 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 C7orf65Q6ZTY9 151 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 DEFB105AQ8NG35 78 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 PRR15LQ9BU68 103 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 CELSR2Q9HCU4 2923 aa2.74□□□□□ -1.97
RFC4-204ENST00000417876 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
RFC4-204ENST00000417876 ZFHX2Q9C0A1 2572 aaPredicted RBP2.73□□□□□ -1.97
RFC4-204ENST00000417876 RIF1Q5UIP0 2472 aaKnown RBP2.73□□□□□ -1.97
RFC4-204ENST00000417876 H0Y9P7 68 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 DEFB4AO15263 64 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 DEFB113Q30KQ7 82 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 LCE3AQ5TA76 89 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 COA5Q86WW8 74 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 WFDC10BQ8IUB3 73 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 LINC00472Q9H8W2 130 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 CEP295Q9C0D2 2601 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 DOPEY1Q5JWR5 2465 aa2.73□□□□□ -1.97
RFC4-204ENST00000417876 SPART-AS1P0CW21 52 aa2.72□□□□□ -1.97
RFC4-204ENST00000417876 SPRR1BP22528 89 aa2.72□□□□□ -1.97
RFC4-204ENST00000417876 LINC01556Q5JQF7 62 aa2.72□□□□□ -1.97
RFC4-204ENST00000417876 WFDC13Q8IUB5 93 aa2.72□□□□□ -1.97
RFC4-204ENST00000417876 ZANQ9Y493 2812 aa2.72□□□□□ -1.97
RFC4-204ENST00000417876 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 MMP24-AS1A0A0U1RRL7 71 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 A0A1W2PNN7 141 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 A8MWP4 228 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 DEFB135Q30KP9 77 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 CASC2Q6XLA1 102 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 IGF2RP11717 2491 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 DNAH1Q9P2D7 4330 aa2.71□□□□□ -1.98
RFC4-204ENST00000417876 CHD6Q8TD26 2715 aa2.7□□□□□ -1.98
RFC4-204ENST00000417876 ITPR1Q14643 2758 aa2.7□□□□□ -1.98
RFC4-204ENST00000417876 C8orf87E5RJ46 101 aa2.7□□□□□ -1.98
RFC4-204ENST00000417876 SPINK7P58062 85 aa2.7□□□□□ -1.98
RFC4-204ENST00000417876 RPL37AP61513 92 aaKnown RBP2.7□□□□□ -1.98
RFC4-204ENST00000417876 SPG11Q96JI7 2443 aa2.7□□□□□ -1.98
RFC4-204ENST00000417876 MUC6Q6W4X9 2439 aa2.69□□□□□ -1.98
RFC4-204ENST00000417876 JMJD1CQ15652 2540 aa2.69□□□□□ -1.98
RFC4-204ENST00000417876 A0A087WSZ3 146 aa2.69□□□□□ -1.98
RFC4-204ENST00000417876 A6NED7 52 aa2.69□□□□□ -1.98
RFC4-204ENST00000417876 USP9YO00507 2555 aaPredicted RBP2.69□□□□□ -1.98
RFC4-204ENST00000417876 TLN2Q9Y4G6 2542 aa2.69□□□□□ -1.98
RFC4-204ENST00000417876 HRES1P13985 223 aa2.68□□□□□ -1.98
RFC4-204ENST00000417876 HTN3P15516 51 aa2.68□□□□□ -1.98
RFC4-204ENST00000417876 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
RFC4-204ENST00000417876 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
RFC4-204ENST00000417876 Q96NJ1 140 aa2.68□□□□□ -1.98
RFC4-204ENST00000417876 ZNF706Q9Y5V0 76 aaPredicted RBP2.68□□□□□ -1.98
RFC4-204ENST00000417876 NIPBLQ6KC79 2804 aaeCLIP2.67□□□□□ -1.98
RFC4-204ENST00000417876 DEFB131BA0A096LNP1 70 aa2.67□□□□□ -1.98
RFC4-204ENST00000417876 USP9XQ93008 2570 aaPredicted RBP2.67□□□□□ -1.98
RFC4-204ENST00000417876 FN1P02751 2386 aaKnown RBP2.67□□□□□ -1.98
RFC4-204ENST00000417876 ALMS1Q8TCU4 4167 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 183.8 ms