RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 F8WEM9 126 aa5.09□□□□□ -1.59
TRIM48-201ENST00000417545 CRYGAP11844 174 aa5.09□□□□□ -1.59
TRIM48-201ENST00000417545 FABP2P12104 132 aa5.09□□□□□ -1.59
TRIM48-201ENST00000417545 ATXN8Q156A1 80 aa5.09□□□□□ -1.59
TRIM48-201ENST00000417545 OCIAD2Q56VL3 154 aa5.09□□□□□ -1.59
TRIM48-201ENST00000417545 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 TEX49A0A1B0GTD5 131 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 C9orf153Q5TBE3 101 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 LAMTOR3Q9UHA4 124 aa5.08□□□□□ -1.6
TRIM48-201ENST00000417545 IGLV9-49A0A0B4J1Y8 123 aa5.07□□□□□ -1.6
TRIM48-201ENST00000417545 OXTP01178 125 aa5.07□□□□□ -1.6
TRIM48-201ENST00000417545 FAM218AQ96MZ4 157 aa5.07□□□□□ -1.6
TRIM48-201ENST00000417545 ANAPC11Q9NYG5 84 aa5.07□□□□□ -1.6
TRIM48-201ENST00000417545 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
TRIM48-201ENST00000417545 FAT1Q14517 4588 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 TRBV20-1A0A075B6N2 111 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 A0A1W2PPM0 123 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 LST1O00453 97 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 TRACP01848 142 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 TYMSOSQ8TAI1 123 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 H3BQ85 93 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 TCL1BO95988 128 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 PPDPFLQ8WWR9 84 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 LINC01600Q96MT4 127 aa5.06□□□□□ -1.6
TRIM48-201ENST00000417545 SRRM2Q9UQ35 2752 aaKnown RBP5.05□□□□□ -1.6
TRIM48-201ENST00000417545 KRTAP1-4P0C5Y4 121 aa5.05□□□□□ -1.6
TRIM48-201ENST00000417545 MOBPQ13875 183 aa5.05□□□□□ -1.6
TRIM48-201ENST00000417545 LINC00483Q53H64 154 aa5.05□□□□□ -1.6
TRIM48-201ENST00000417545 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
TRIM48-201ENST00000417545 SPCS1Q9Y6A9 102 aa5.05□□□□□ -1.6
TRIM48-201ENST00000417545 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
TRIM48-201ENST00000417545 SPRR1BP22528 89 aa5.04□□□□□ -1.6
TRIM48-201ENST00000417545 Q8NBF4 154 aa5.04□□□□□ -1.6
TRIM48-201ENST00000417545 A0A087X002 238 aa5.03□□□□□ -1.6
TRIM48-201ENST00000417545 KRTAP29-1A8MX34 341 aaPredicted RBP5.03□□□□□ -1.6
TRIM48-201ENST00000417545 TMEM256-PLSCR3K7ERE1 68 aa5.03□□□□□ -1.6
TRIM48-201ENST00000417545 Q8N377 158 aa5.03□□□□□ -1.6
TRIM48-201ENST00000417545 C3orf22Q8N5N4 141 aa5.03□□□□□ -1.6
TRIM48-201ENST00000417545 C9JAW5 83 aa5.02□□□□□ -1.61
TRIM48-201ENST00000417545 GTF2H5Q6ZYL4 71 aa5.02□□□□□ -1.61
TRIM48-201ENST00000417545 A0A1B0GV72 72 aa5.01□□□□□ -1.61
TRIM48-201ENST00000417545 LINC01547P58512 204 aaPredicted RBP5.01□□□□□ -1.61
TRIM48-201ENST00000417545 BAALC-AS2P0C853 105 aa5□□□□□ -1.61
TRIM48-201ENST00000417545 NDUFV3P56181 108 aaKnown RBP5□□□□□ -1.61
TRIM48-201ENST00000417545 KRTAP13-2Q52LG2 175 aa5□□□□□ -1.61
TRIM48-201ENST00000417545 SSBP3-AS1Q7Z2R9 100 aa5□□□□□ -1.61
TRIM48-201ENST00000417545 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
TRIM48-201ENST00000417545 H3BMG7 143 aa4.99□□□□□ -1.61
TRIM48-201ENST00000417545 K7EP34 96 aa4.99□□□□□ -1.61
TRIM48-201ENST00000417545 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
TRIM48-201ENST00000417545 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
TRIM48-201ENST00000417545 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
TRIM48-201ENST00000417545 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 H3BT86 120 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 PCP4P48539 62 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 UBE2V1Q13404 147 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 Q6JHZ5 121 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 SPAG11AQ6PDA7 123 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 MTURNQ8N3F0 131 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 KRTAP10-8P60410 259 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
TRIM48-201ENST00000417545 JMJD7-PLA2G4BH0Y9G9 81 aa4.96□□□□□ -1.62
TRIM48-201ENST00000417545 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
TRIM48-201ENST00000417545 DSCR8Q96T75 97 aa4.96□□□□□ -1.62
TRIM48-201ENST00000417545 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
TRIM48-201ENST00000417545 RBM3P98179 157 aaKnown RBP4.95□□□□□ -1.62
TRIM48-201ENST00000417545 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
TRIM48-201ENST00000417545 SPINK1P00995 79 aa4.94□□□□□ -1.62
TRIM48-201ENST00000417545 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
TRIM48-201ENST00000417545 VPS25Q9BRG1 176 aa4.94□□□□□ -1.62
TRIM48-201ENST00000417545 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
TRIM48-201ENST00000417545 IGLV8-61A0A075B6I0 122 aa4.93□□□□□ -1.62
TRIM48-201ENST00000417545 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
TRIM48-201ENST00000417545 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
TRIM48-201ENST00000417545 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
TRIM48-201ENST00000417545 K7ERU9 68 aa4.92□□□□□ -1.62
TRIM48-201ENST00000417545 CD164Q04900 197 aa4.92□□□□□ -1.62
TRIM48-201ENST00000417545 CCKP06307 115 aa4.91□□□□□ -1.62
TRIM48-201ENST00000417545 MYCBP2O75592 4640 aa4.91□□□□□ -1.62
TRIM48-201ENST00000417545 F8W1H4 67 aa4.9□□□□□ -1.62
TRIM48-201ENST00000417545 TEN1Q86WV5 123 aa4.9□□□□□ -1.62
TRIM48-201ENST00000417545 C14orf132Q9NPU4 83 aa4.9□□□□□ -1.62
TRIM48-201ENST00000417545 PDE6GP18545 87 aa4.89□□□□□ -1.63
TRIM48-201ENST00000417545 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
TRIM48-201ENST00000417545 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
TRIM48-201ENST00000417545 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
TRIM48-201ENST00000417545 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
TRIM48-201ENST00000417545 TRBV7-4A0A0J9YYF1 115 aa4.88□□□□□ -1.63
TRIM48-201ENST00000417545 A0A087WSZ3 146 aa4.87□□□□□ -1.63
TRIM48-201ENST00000417545 PRR4Q16378 134 aa4.87□□□□□ -1.63
TRIM48-201ENST00000417545 Q6Q795 121 aa4.87□□□□□ -1.63
TRIM48-201ENST00000417545 PRO0461Q9UI25 63 aa4.87□□□□□ -1.63
TRIM48-201ENST00000417545 TNXBP22105 4242 aa4.86□□□□□ -1.63
TRIM48-201ENST00000417545 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
TRIM48-201ENST00000417545 Q6ZQT0 140 aa4.86□□□□□ -1.63
TRIM48-201ENST00000417545 RETNLBQ9BQ08 111 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms