RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LINC00575Q6W349 94 aa7.45□□□□□ -1.22
LINC00339-202ENST00000416769 SLC25A20O43772 301 aa7.44□□□□□ -1.22
LINC00339-202ENST00000416769 TAX1BP3O14907 124 aa7.43□□□□□ -1.22
LINC00339-202ENST00000416769 ERC2-IT1O76042 136 aa7.43□□□□□ -1.22
LINC00339-202ENST00000416769 SCGB1C2P0DMR2 95 aa7.43□□□□□ -1.22
LINC00339-202ENST00000416769 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
LINC00339-202ENST00000416769 A0A1B0GX51 115 aa7.42□□□□□ -1.22
LINC00339-202ENST00000416769 hADV29S1A0JD25 119 aa7.42□□□□□ -1.22
LINC00339-202ENST00000416769 SNCGO76070 127 aa7.42□□□□□ -1.22
LINC00339-202ENST00000416769 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
LINC00339-202ENST00000416769 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
LINC00339-202ENST00000416769 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
LINC00339-202ENST00000416769 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
LINC00339-202ENST00000416769 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
LINC00339-202ENST00000416769 H3BUT2 72 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 C3orf22Q8N5N4 141 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 FAM218AQ96MZ4 157 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 NAA38Q9BRA0 125 aaKnown RBP7.39□□□□□ -1.23
LINC00339-202ENST00000416769 KRTAP4-1Q9BYQ7 146 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
LINC00339-202ENST00000416769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
LINC00339-202ENST00000416769 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
LINC00339-202ENST00000416769 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
LINC00339-202ENST00000416769 ST20-AS1Q8NBB2 130 aa7.37□□□□□ -1.23
LINC00339-202ENST00000416769 SPRR1BP22528 89 aa7.36□□□□□ -1.23
LINC00339-202ENST00000416769 LINC00483Q53H64 154 aa7.36□□□□□ -1.23
LINC00339-202ENST00000416769 OCIAD2Q56VL3 154 aa7.36□□□□□ -1.23
LINC00339-202ENST00000416769 GAGE2AQ6NT46 116 aa7.36□□□□□ -1.23
LINC00339-202ENST00000416769 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 IGLV5-48A0A075B6I7 105 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 TEX49A0A1B0GTD5 131 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 A0A1W2PPM0 123 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 LST1O00453 97 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 TRACP01848 142 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 LINC01547P58512 204 aaPredicted RBP7.35□□□□□ -1.23
LINC00339-202ENST00000416769 FAM229BQ4G0N7 80 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 Q6ZQY7 126 aa7.35□□□□□ -1.23
LINC00339-202ENST00000416769 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
LINC00339-202ENST00000416769 TCL1BO95988 128 aa7.34□□□□□ -1.23
LINC00339-202ENST00000416769 DEFB105AQ8NG35 78 aa7.34□□□□□ -1.23
LINC00339-202ENST00000416769 FABP2P12104 132 aa7.33□□□□□ -1.24
LINC00339-202ENST00000416769 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
LINC00339-202ENST00000416769 Q8N377 158 aa7.33□□□□□ -1.24
LINC00339-202ENST00000416769 PPDPFLQ8WWR9 84 aa7.33□□□□□ -1.24
LINC00339-202ENST00000416769 H3BQ85 93 aa7.32□□□□□ -1.24
LINC00339-202ENST00000416769 DNAL4O96015 105 aa7.32□□□□□ -1.24
LINC00339-202ENST00000416769 ORMDL1Q9P0S3 153 aa7.3□□□□□ -1.24
LINC00339-202ENST00000416769 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
LINC00339-202ENST00000416769 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
LINC00339-202ENST00000416769 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
LINC00339-202ENST00000416769 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
LINC00339-202ENST00000416769 H3BS24 57 aa7.27□□□□□ -1.25
LINC00339-202ENST00000416769 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
LINC00339-202ENST00000416769 BAALC-AS2P0C853 105 aa7.26□□□□□ -1.25
LINC00339-202ENST00000416769 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
LINC00339-202ENST00000416769 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
LINC00339-202ENST00000416769 IGLV9-49A0A0B4J1Y8 123 aa7.25□□□□□ -1.25
LINC00339-202ENST00000416769 ASB16-AS1Q495Z4 193 aa7.25□□□□□ -1.25
LINC00339-202ENST00000416769 H3BMG7 143 aa7.24□□□□□ -1.25
LINC00339-202ENST00000416769 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
LINC00339-202ENST00000416769 UBE2V1Q13404 147 aa7.24□□□□□ -1.25
LINC00339-202ENST00000416769 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
LINC00339-202ENST00000416769 K7EP34 96 aa7.23□□□□□ -1.25
LINC00339-202ENST00000416769 GTF2H5Q6ZYL4 71 aa7.23□□□□□ -1.25
LINC00339-202ENST00000416769 Q8NBF4 154 aa7.23□□□□□ -1.25
LINC00339-202ENST00000416769 IGLV8-61A0A075B6I0 122 aa7.22□□□□□ -1.25
LINC00339-202ENST00000416769 C9JAW5 83 aa7.22□□□□□ -1.25
LINC00339-202ENST00000416769 F8WEM9 126 aa7.22□□□□□ -1.25
LINC00339-202ENST00000416769 MOBPQ13875 183 aa7.22□□□□□ -1.25
LINC00339-202ENST00000416769 C9orf153Q5TBE3 101 aa7.22□□□□□ -1.25
LINC00339-202ENST00000416769 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
LINC00339-202ENST00000416769 H3BT86 120 aa7.2□□□□□ -1.26
LINC00339-202ENST00000416769 Q6JHZ5 121 aa7.19□□□□□ -1.26
LINC00339-202ENST00000416769 ANKRD29Q8N6D5 301 aa7.19□□□□□ -1.26
LINC00339-202ENST00000416769 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LINC00339-202ENST00000416769 SPAG11AQ6PDA7 123 aa7.18□□□□□ -1.26
LINC00339-202ENST00000416769 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
LINC00339-202ENST00000416769 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
LINC00339-202ENST00000416769 RBM3P98179 157 aaKnown RBP7.15□□□□□ -1.26
LINC00339-202ENST00000416769 IGFL1Q6UW32 110 aa7.15□□□□□ -1.26
LINC00339-202ENST00000416769 MTURNQ8N3F0 131 aa7.15□□□□□ -1.26
LINC00339-202ENST00000416769 A0A1B0GV90 55 aa7.14□□□□□ -1.27
LINC00339-202ENST00000416769 F8W1H4 67 aa7.14□□□□□ -1.27
LINC00339-202ENST00000416769 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
LINC00339-202ENST00000416769 CD164Q04900 197 aa7.14□□□□□ -1.27
LINC00339-202ENST00000416769 SPINK1P00995 79 aa7.13□□□□□ -1.27
LINC00339-202ENST00000416769 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
LINC00339-202ENST00000416769 MT1HP80294 61 aa7.12□□□□□ -1.27
LINC00339-202ENST00000416769 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
LINC00339-202ENST00000416769 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
LINC00339-202ENST00000416769 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
LINC00339-202ENST00000416769 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
LINC00339-202ENST00000416769 Q6Q795 121 aa7.11□□□□□ -1.27
LINC00339-202ENST00000416769 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
LINC00339-202ENST00000416769 TEN1Q86WV5 123 aa7.1□□□□□ -1.27
LINC00339-202ENST00000416769 A0A1B0GV72 72 aa7.09□□□□□ -1.27
LINC00339-202ENST00000416769 PDE6GP18545 87 aa7.09□□□□□ -1.27
LINC00339-202ENST00000416769 A0A1W2PNM2 257 aa7.08□□□□□ -1.28
LINC00339-202ENST00000416769 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 1230.4 ms