RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 HIGD2AQ9BW72 106 aa5.23□□□□□ -1.57
LINC01238-201ENST00000416204 A0A0U1RRA0 63 aa5.22□□□□□ -1.57
LINC01238-201ENST00000416204 ETDBQ3ZM63 59 aa5.22□□□□□ -1.57
LINC01238-201ENST00000416204 TMEM126AQ9H061 195 aa5.22□□□□□ -1.57
LINC01238-201ENST00000416204 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
LINC01238-201ENST00000416204 IGLV5-37A0A075B6J1 123 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 TRBV10-2A0A0K0K1G8 114 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 M0R378 163 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 LST1O00453 97 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 SLC25A20O43772 301 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 SPAG11AQ6PDA7 123 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 TEN1Q86WV5 123 aa5.21□□□□□ -1.58
LINC01238-201ENST00000416204 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 USH2AO75445 5202 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 C9JAW5 83 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 H3BT86 120 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 NDUFC2O95298 119 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
LINC01238-201ENST00000416204 PFN2P35080 140 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
LINC01238-201ENST00000416204 ANKRD29Q8N6D5 301 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 PPDPFLQ8WWR9 84 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 VPS25Q9BRG1 176 aa5.2□□□□□ -1.58
LINC01238-201ENST00000416204 TRACP01848 142 aa5.19□□□□□ -1.58
LINC01238-201ENST00000416204 Q8NDZ9 215 aa5.19□□□□□ -1.58
LINC01238-201ENST00000416204 SPRR4Q96PI1 79 aa5.19□□□□□ -1.58
LINC01238-201ENST00000416204 H0YGX0 51 aa5.18□□□□□ -1.58
LINC01238-201ENST00000416204 GHRHP01286 108 aa5.18□□□□□ -1.58
LINC01238-201ENST00000416204 XP32Q5T750 250 aa5.18□□□□□ -1.58
LINC01238-201ENST00000416204 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
LINC01238-201ENST00000416204 VPREB1P12018 145 aa5.17□□□□□ -1.58
LINC01238-201ENST00000416204 MTURNQ8N3F0 131 aa5.17□□□□□ -1.58
LINC01238-201ENST00000416204 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
LINC01238-201ENST00000416204 M0R2T5 61 aa5.16□□□□□ -1.58
LINC01238-201ENST00000416204 PCOTHQ58A44 107 aa5.16□□□□□ -1.58
LINC01238-201ENST00000416204 CLEC2BQ92478 149 aa5.16□□□□□ -1.58
LINC01238-201ENST00000416204 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
LINC01238-201ENST00000416204 A0A1B0GX51 115 aa5.15□□□□□ -1.59
LINC01238-201ENST00000416204 IGLV9-49A0A0B4J1Y8 123 aa5.14□□□□□ -1.59
LINC01238-201ENST00000416204 SPINK1P00995 79 aa5.14□□□□□ -1.59
LINC01238-201ENST00000416204 Q8N377 158 aa5.14□□□□□ -1.59
LINC01238-201ENST00000416204 OR13C6PQ8NH95 151 aa5.14□□□□□ -1.59
LINC01238-201ENST00000416204 SMIM11BQ8TCY0 68 aa5.14□□□□□ -1.59
LINC01238-201ENST00000416204 SNCGO76070 127 aa5.13□□□□□ -1.59
LINC01238-201ENST00000416204 MOBPQ13875 183 aa5.13□□□□□ -1.59
LINC01238-201ENST00000416204 SIGMAR1Q99720 223 aa5.12□□□□□ -1.59
LINC01238-201ENST00000416204 ZNF706Q9Y5V0 76 aaPredicted RBP5.12□□□□□ -1.59
LINC01238-201ENST00000416204 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
LINC01238-201ENST00000416204 DNAL4O96015 105 aa5.11□□□□□ -1.59
LINC01238-201ENST00000416204 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
LINC01238-201ENST00000416204 SMCR5Q8TEV8 140 aa5.11□□□□□ -1.59
LINC01238-201ENST00000416204 FAM240AA0A1B0GVK7 77 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 H3BQ85 93 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 BAALC-AS2P0C853 105 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 SCGB1A1P11684 91 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 S100A7L2Q5SY68 101 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
LINC01238-201ENST00000416204 TEX49A0A1B0GTD5 131 aa5.09□□□□□ -1.59
LINC01238-201ENST00000416204 ACYP1P07311 99 aa5.09□□□□□ -1.59
LINC01238-201ENST00000416204 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
LINC01238-201ENST00000416204 NCR3O14931 201 aa5.08□□□□□ -1.6
LINC01238-201ENST00000416204 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
LINC01238-201ENST00000416204 TRBV7-6A0A0J9YX20 115 aa5.07□□□□□ -1.6
LINC01238-201ENST00000416204 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
LINC01238-201ENST00000416204 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
LINC01238-201ENST00000416204 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
LINC01238-201ENST00000416204 PCP4P48539 62 aa5.06□□□□□ -1.6
LINC01238-201ENST00000416204 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
LINC01238-201ENST00000416204 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
LINC01238-201ENST00000416204 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 TMEM256-PLSCR3K7ERE1 68 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 C6orf99Q4VX62 202 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 C9orf153Q5TBE3 101 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 LINC00575Q6W349 94 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 OBSCN-AS1Q96MR7 158 aa5.05□□□□□ -1.6
LINC01238-201ENST00000416204 TRAV23DV6A0A075B6W5 121 aa5.04□□□□□ -1.6
LINC01238-201ENST00000416204 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
LINC01238-201ENST00000416204 HRCT1Q6UXD1 115 aa5.04□□□□□ -1.6
LINC01238-201ENST00000416204 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
LINC01238-201ENST00000416204 hADV29S1A0JD25 119 aa5.03□□□□□ -1.6
LINC01238-201ENST00000416204 PRYO14603 147 aa5.03□□□□□ -1.6
LINC01238-201ENST00000416204 RPS29P62273 56 aaKnown RBP5.03□□□□□ -1.6
LINC01238-201ENST00000416204 SSBP3-AS1Q7Z2R9 100 aa5.03□□□□□ -1.6
LINC01238-201ENST00000416204 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
LINC01238-201ENST00000416204 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
LINC01238-201ENST00000416204 ZNF73O43830 326 aaPredicted RBP5.02□□□□□ -1.61
LINC01238-201ENST00000416204 SPRR1AP35321 89 aa5.02□□□□□ -1.61
LINC01238-201ENST00000416204 COX7BP24311 80 aa5.01□□□□□ -1.61
LINC01238-201ENST00000416204 ELOF1P60002 83 aaKnown RBP5.01□□□□□ -1.61
LINC01238-201ENST00000416204 Q6Q795 121 aa5.01□□□□□ -1.61
LINC01238-201ENST00000416204 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.01□□□□□ -1.61
LINC01238-201ENST00000416204 B5MCH6 92 aa5□□□□□ -1.61
LINC01238-201ENST00000416204 MT-ATP8P03928 68 aa5□□□□□ -1.61
LINC01238-201ENST00000416204 Q9BRP9 147 aa5□□□□□ -1.61
LINC01238-201ENST00000416204 KCNQ1DNQ9H478 68 aa5□□□□□ -1.61
LINC01238-201ENST00000416204 LINC00643Q86TS7 51 aa4.99□□□□□ -1.61
LINC01238-201ENST00000416204 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
LINC01238-201ENST00000416204 PDE6GP18545 87 aa4.98□□□□□ -1.61
LINC01238-201ENST00000416204 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms