RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
COL12A1-203ENST00000416123 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
COL12A1-203ENST00000416123 PRO0628Q9UI54 55 aa6.75□□□□□ -1.33
COL12A1-203ENST00000416123 LRBAP50851 2863 aa6.74□□□□□ -1.33
COL12A1-203ENST00000416123 KALRNO60229 2985 aa6.74□□□□□ -1.33
COL12A1-203ENST00000416123 WDFY3Q8IZQ1 3526 aa6.73□□□□□ -1.33
COL12A1-203ENST00000416123 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
COL12A1-203ENST00000416123 A0A0D9SG42 100 aa6.72□□□□□ -1.33
COL12A1-203ENST00000416123 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
COL12A1-203ENST00000416123 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.33
COL12A1-203ENST00000416123 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
COL12A1-203ENST00000416123 UQCR11O14957 56 aa6.69□□□□□ -1.34
COL12A1-203ENST00000416123 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
COL12A1-203ENST00000416123 TEP1Q99973 2627 aaKnown RBP6.68□□□□□ -1.34
COL12A1-203ENST00000416123 ZNF292O60281 2723 aa6.68□□□□□ -1.34
COL12A1-203ENST00000416123 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
COL12A1-203ENST00000416123 Q6ZSA8 131 aa6.64□□□□□ -1.35
COL12A1-203ENST00000416123 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
COL12A1-203ENST00000416123 H7BZZ5 65 aa6.62□□□□□ -1.35
COL12A1-203ENST00000416123 CDC42SE1Q9NRR8 79 aa6.62□□□□□ -1.35
COL12A1-203ENST00000416123 FAM104AQ969W3 186 aa6.62□□□□□ -1.35
COL12A1-203ENST00000416123 M0R2T5 61 aa6.62□□□□□ -1.35
COL12A1-203ENST00000416123 KTN1-AS1Q86SY8 53 aa6.6□□□□□ -1.35
COL12A1-203ENST00000416123 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
COL12A1-203ENST00000416123 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
COL12A1-203ENST00000416123 DMXL2Q8TDJ6 3036 aa6.59□□□□□ -1.35
COL12A1-203ENST00000416123 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
COL12A1-203ENST00000416123 CRYBG3Q68DQ2 2970 aa6.59□□□□□ -1.36
COL12A1-203ENST00000416123 Q8NDZ9 215 aa6.58□□□□□ -1.36
COL12A1-203ENST00000416123 ITPR2Q14571 2701 aa6.57□□□□□ -1.36
COL12A1-203ENST00000416123 TNRC18O15417 2968 aaPredicted RBP6.57□□□□□ -1.36
COL12A1-203ENST00000416123 ADGRG4Q8IZF6 3080 aa6.56□□□□□ -1.36
COL12A1-203ENST00000416123 WIPF1O43516 503 aa6.55□□□□□ -1.36
COL12A1-203ENST00000416123 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
COL12A1-203ENST00000416123 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
COL12A1-203ENST00000416123 UNC79Q9P2D8 2635 aa6.54□□□□□ -1.36
COL12A1-203ENST00000416123 NBEAL2Q6ZNJ1 2754 aa6.54□□□□□ -1.36
COL12A1-203ENST00000416123 CD164Q04900 197 aa6.53□□□□□ -1.36
COL12A1-203ENST00000416123 ASH1LQ9NR48 2969 aaKnown RBP6.53□□□□□ -1.36
COL12A1-203ENST00000416123 BAHCC1Q9P281 2608 aa6.53□□□□□ -1.36
COL12A1-203ENST00000416123 ATMQ13315 3056 aa6.53□□□□□ -1.36
COL12A1-203ENST00000416123 NBEAL1Q6ZS30 2694 aa6.52□□□□□ -1.36
COL12A1-203ENST00000416123 HRES1P13985 223 aa6.52□□□□□ -1.37
COL12A1-203ENST00000416123 COL6A5A8TX70 2615 aa6.52□□□□□ -1.37
COL12A1-203ENST00000416123 LOC400499M0QZD8 3231 aa6.51□□□□□ -1.37
COL12A1-203ENST00000416123 IGSF10Q6WRI0 2623 aa6.51□□□□□ -1.37
COL12A1-203ENST00000416123 NBEAQ8NFP9 2946 aa6.51□□□□□ -1.37
COL12A1-203ENST00000416123 Q5VSD8 79 aa6.5□□□□□ -1.37
COL12A1-203ENST00000416123 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
COL12A1-203ENST00000416123 DMXL1Q9Y485 3027 aa6.5□□□□□ -1.37
COL12A1-203ENST00000416123 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
COL12A1-203ENST00000416123 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
COL12A1-203ENST00000416123 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
COL12A1-203ENST00000416123 SETXQ7Z333 2677 aaKnown RBP6.49□□□□□ -1.37
COL12A1-203ENST00000416123 FAM229BQ4G0N7 80 aa6.48□□□□□ -1.37
COL12A1-203ENST00000416123 KRTAP10-1P60331 282 aa6.48□□□□□ -1.37
COL12A1-203ENST00000416123 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
COL12A1-203ENST00000416123 UTP20O75691 2785 aaKnown RBP6.46□□□□□ -1.37
COL12A1-203ENST00000416123 KMT2BQ9UMN6 2715 aaPredicted RBP6.46□□□□□ -1.38
COL12A1-203ENST00000416123 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
COL12A1-203ENST00000416123 S4R3F8 94 aa6.45□□□□□ -1.38
COL12A1-203ENST00000416123 TACC2O95359 2948 aa6.45□□□□□ -1.38
COL12A1-203ENST00000416123 STAB1Q9NY15 2570 aa6.45□□□□□ -1.38
COL12A1-203ENST00000416123 ZCCHC13Q8WW36 166 aaKnown RBP6.44□□□□□ -1.38
COL12A1-203ENST00000416123 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
COL12A1-203ENST00000416123 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
COL12A1-203ENST00000416123 DCHS1Q96JQ0 3298 aa6.42□□□□□ -1.38
COL12A1-203ENST00000416123 SPRR1AP35321 89 aa6.42□□□□□ -1.38
COL12A1-203ENST00000416123 LCE6AA0A183 80 aa6.41□□□□□ -1.38
COL12A1-203ENST00000416123 A0A1B0GU33 70 aa6.41□□□□□ -1.38
COL12A1-203ENST00000416123 LAMA5O15230 3695 aa6.39□□□□□ -1.39
COL12A1-203ENST00000416123 APCP25054 2843 aa6.39□□□□□ -1.39
COL12A1-203ENST00000416123 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
COL12A1-203ENST00000416123 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
COL12A1-203ENST00000416123 NOTCH1P46531 2555 aa6.38□□□□□ -1.39
COL12A1-203ENST00000416123 PANO1I0J062 215 aa6.38□□□□□ -1.39
COL12A1-203ENST00000416123 Q5W150 140 aa6.38□□□□□ -1.39
COL12A1-203ENST00000416123 ZZEF1O43149 2961 aa6.37□□□□□ -1.39
COL12A1-203ENST00000416123 Q1T7F1 81 aa6.37□□□□□ -1.39
COL12A1-203ENST00000416123 SPINK7P58062 85 aa6.37□□□□□ -1.39
COL12A1-203ENST00000416123 LINC00472Q9H8W2 130 aa6.35□□□□□ -1.39
COL12A1-203ENST00000416123 ITPR1Q14643 2758 aa6.35□□□□□ -1.39
COL12A1-203ENST00000416123 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
COL12A1-203ENST00000416123 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
COL12A1-203ENST00000416123 UBR5O95071 2799 aaPredicted RBP6.34□□□□□ -1.4
COL12A1-203ENST00000416123 ZFHX4Q86UP3 3567 aa6.33□□□□□ -1.4
COL12A1-203ENST00000416123 DMDP11532 3685 aa6.33□□□□□ -1.4
COL12A1-203ENST00000416123 LCA10Q71F78 164 aa6.33□□□□□ -1.4
COL12A1-203ENST00000416123 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
COL12A1-203ENST00000416123 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
COL12A1-203ENST00000416123 RELNP78509 3460 aa6.29□□□□□ -1.4
COL12A1-203ENST00000416123 A0A087X002 238 aa6.29□□□□□ -1.4
COL12A1-203ENST00000416123 SPRR1BP22528 89 aa6.29□□□□□ -1.4
COL12A1-203ENST00000416123 R4GN34 69 aa6.28□□□□□ -1.4
COL12A1-203ENST00000416123 CSMD1Q96PZ7 3565 aa6.28□□□□□ -1.4
COL12A1-203ENST00000416123 NSD1Q96L73 2696 aaPredicted RBP6.27□□□□□ -1.41
COL12A1-203ENST00000416123 Q75L30 129 aa6.26□□□□□ -1.41
COL12A1-203ENST00000416123 STAB2Q8WWQ8 2551 aa6.26□□□□□ -1.41
COL12A1-203ENST00000416123 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
COL12A1-203ENST00000416123 HIVEP1P15822 2718 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms