RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 VAMP3Q15836 100 aa9.58□□□□□ -0.88
HSPG2-204ENST00000412328 KRTAP4-1Q9BYQ7 146 aa9.57□□□□□ -0.88
HSPG2-204ENST00000412328 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
HSPG2-204ENST00000412328 H7C2G1 150 aa9.56□□□□□ -0.88
HSPG2-204ENST00000412328 BVES-AS1Q5T3Y7 98 aa9.56□□□□□ -0.88
HSPG2-204ENST00000412328 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-204ENST00000412328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
HSPG2-204ENST00000412328 CEND1Q8N111 149 aa9.53□□□□□ -0.88
HSPG2-204ENST00000412328 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
HSPG2-204ENST00000412328 FXYD2P54710 66 aa9.52□□□□□ -0.89
HSPG2-204ENST00000412328 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
HSPG2-204ENST00000412328 C1orf195Q5TG92 126 aa9.51□□□□□ -0.89
HSPG2-204ENST00000412328 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
HSPG2-204ENST00000412328 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
HSPG2-204ENST00000412328 RAB37Q96AX2 223 aa9.5□□□□□ -0.89
HSPG2-204ENST00000412328 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
HSPG2-204ENST00000412328 TMA7Q9Y2S6 64 aaKnown RBP9.48□□□□□ -0.89
HSPG2-204ENST00000412328 F8WEM9 126 aa9.47□□□□□ -0.89
HSPG2-204ENST00000412328 SEC61BP60468 96 aaKnown RBP9.47□□□□□ -0.89
HSPG2-204ENST00000412328 Q6JHZ5 121 aa9.46□□□□□ -0.9
HSPG2-204ENST00000412328 OCIAD2Q56VL3 154 aa9.45□□□□□ -0.9
HSPG2-204ENST00000412328 PRO1854Q9UHT4 67 aa9.45□□□□□ -0.9
HSPG2-204ENST00000412328 TMEM238LA0A1B0GVL6 79 aa9.44□□□□□ -0.9
HSPG2-204ENST00000412328 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
HSPG2-204ENST00000412328 A6NJY4 79 aa9.44□□□□□ -0.9
HSPG2-204ENST00000412328 TRBV7-7A0A0K0K1E9 115 aa9.43□□□□□ -0.9
HSPG2-204ENST00000412328 H0YGX0 51 aa9.43□□□□□ -0.9
HSPG2-204ENST00000412328 HSD52Q0P140 79 aa9.43□□□□□ -0.9
HSPG2-204ENST00000412328 TRIAP1O43715 76 aa9.42□□□□□ -0.9
HSPG2-204ENST00000412328 H3BUT2 72 aa9.41□□□□□ -0.9
HSPG2-204ENST00000412328 K7ERJ3 54 aa9.41□□□□□ -0.9
HSPG2-204ENST00000412328 A0A1B0GX51 115 aa9.39□□□□□ -0.91
HSPG2-204ENST00000412328 TCL1BO95988 128 aa9.38□□□□□ -0.91
HSPG2-204ENST00000412328 Q6Q795 121 aa9.37□□□□□ -0.91
HSPG2-204ENST00000412328 SNHG12Q9BXW3 62 aa9.37□□□□□ -0.91
HSPG2-204ENST00000412328 UQCR10Q9UDW1 63 aa9.37□□□□□ -0.91
HSPG2-204ENST00000412328 KRTAP19-2Q3LHN2 52 aa9.36□□□□□ -0.91
HSPG2-204ENST00000412328 NDUFV3P56181 108 aaKnown RBP9.35□□□□□ -0.91
HSPG2-204ENST00000412328 PCOTHQ58A44 107 aa9.34□□□□□ -0.91
HSPG2-204ENST00000412328 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
HSPG2-204ENST00000412328 RPL37P61927 97 aaKnown RBP9.32□□□□□ -0.92
HSPG2-204ENST00000412328 SNCGO76070 127 aa9.28□□□□□ -0.92
HSPG2-204ENST00000412328 TEN1Q86WV5 123 aa9.28□□□□□ -0.92
HSPG2-204ENST00000412328 H3BMG7 143 aa9.27□□□□□ -0.93
HSPG2-204ENST00000412328 Q96NJ1 140 aa9.27□□□□□ -0.93
HSPG2-204ENST00000412328 A0A1W2PNM2 257 aa9.26□□□□□ -0.93
HSPG2-204ENST00000412328 FABP2P12104 132 aa9.25□□□□□ -0.93
HSPG2-204ENST00000412328 PSMB2P49721 201 aa9.24□□□□□ -0.93
HSPG2-204ENST00000412328 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
HSPG2-204ENST00000412328 A0A087WSZ3 146 aa9.23□□□□□ -0.93
HSPG2-204ENST00000412328 LST1O00453 97 aa9.23□□□□□ -0.93
HSPG2-204ENST00000412328 GHRHP01286 108 aa9.23□□□□□ -0.93
HSPG2-204ENST00000412328 SS18L2Q9UHA2 77 aa9.23□□□□□ -0.93
HSPG2-204ENST00000412328 DNAL4O96015 105 aa9.22□□□□□ -0.93
HSPG2-204ENST00000412328 FLGP20930 4061 aaPredicted RBP9.19□□□□□ -0.94
HSPG2-204ENST00000412328 TRACP01848 142 aa9.19□□□□□ -0.94
HSPG2-204ENST00000412328 COX6CP09669 75 aa9.19□□□□□ -0.94
HSPG2-204ENST00000412328 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
HSPG2-204ENST00000412328 OBSCN-AS1Q96MR7 158 aa9.19□□□□□ -0.94
HSPG2-204ENST00000412328 KRTAP9-2Q9BYQ4 174 aa9.18□□□□□ -0.94
HSPG2-204ENST00000412328 H3BQ85 93 aa9.17□□□□□ -0.94
HSPG2-204ENST00000412328 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
HSPG2-204ENST00000412328 Q75L30 129 aa9.17□□□□□ -0.94
HSPG2-204ENST00000412328 TRBV7-4A0A0J9YYF1 115 aa9.16□□□□□ -0.94
HSPG2-204ENST00000412328 A0A1B0GV72 72 aa9.16□□□□□ -0.94
HSPG2-204ENST00000412328 MT1HP80294 61 aa9.16□□□□□ -0.94
HSPG2-204ENST00000412328 UBE2V1Q13404 147 aa9.16□□□□□ -0.94
HSPG2-204ENST00000412328 ANKRD29Q8N6D5 301 aa9.13□□□□□ -0.95
HSPG2-204ENST00000412328 C20orf166-AS1Q96NR2 134 aa9.12□□□□□ -0.95
HSPG2-204ENST00000412328 A8MUU9 505 aa9.1□□□□□ -0.95
HSPG2-204ENST00000412328 M0R143 59 aa9.1□□□□□ -0.95
HSPG2-204ENST00000412328 CCKP06307 115 aa9.09□□□□□ -0.95
HSPG2-204ENST00000412328 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
HSPG2-204ENST00000412328 LINC00472Q9H8W2 130 aa9.08□□□□□ -0.96
HSPG2-204ENST00000412328 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
HSPG2-204ENST00000412328 SCGB1C2P0DMR2 95 aa9.07□□□□□ -0.96
HSPG2-204ENST00000412328 LOC105371267A0A1B0GV96 52 aa9.06□□□□□ -0.96
HSPG2-204ENST00000412328 DSCR10P59022 87 aa9.05□□□□□ -0.96
HSPG2-204ENST00000412328 SIGMAR1Q99720 223 aa9.05□□□□□ -0.96
HSPG2-204ENST00000412328 IGKV4-1P06312 121 aa9.02□□□□□ -0.97
HSPG2-204ENST00000412328 BAALC-AS2P0C853 105 aa9.02□□□□□ -0.97
HSPG2-204ENST00000412328 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.97
HSPG2-204ENST00000412328 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
HSPG2-204ENST00000412328 NOTCH2NLQ7Z3S9 236 aa9.02□□□□□ -0.97
HSPG2-204ENST00000412328 ATXN8Q156A1 80 aa9□□□□□ -0.97
HSPG2-204ENST00000412328 DEFB116Q30KQ4 102 aa9□□□□□ -0.97
HSPG2-204ENST00000412328 TSTD3H0UI37 97 aa8.99□□□□□ -0.97
HSPG2-204ENST00000412328 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
HSPG2-204ENST00000412328 DSCR8Q96T75 97 aa8.97□□□□□ -0.97
HSPG2-204ENST00000412328 LINC00313P59037 77 aa8.96□□□□□ -0.98
HSPG2-204ENST00000412328 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
HSPG2-204ENST00000412328 Q6ZQT0 140 aa8.96□□□□□ -0.98
HSPG2-204ENST00000412328 VPS25Q9BRG1 176 aa8.96□□□□□ -0.98
HSPG2-204ENST00000412328 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
HSPG2-204ENST00000412328 LOC110117498A0A087WWA1 95 aa8.94□□□□□ -0.98
HSPG2-204ENST00000412328 C9JAW5 83 aa8.94□□□□□ -0.98
HSPG2-204ENST00000412328 A0A1B0GVX0 72 aa8.91□□□□□ -0.98
HSPG2-204ENST00000412328 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
HSPG2-204ENST00000412328 BATFQ16520 125 aa8.91□□□□□ -0.98
HSPG2-204ENST00000412328 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms