RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SPTSSBQ8NFR3 76 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 CRCT1Q9UGL9 99 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 ZDBF2Q9HCK1 2354 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 ADGRG4Q8IZF6 3080 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 ROS1P08922 2347 aa1.38□□□□□ -2.19
HMGB3P2-201ENST00000411913 LRBAP50851 2863 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPTBN2O15020 2390 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPTBN1Q01082 2364 aaKnown RBP1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 TTC28Q96AY4 2481 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 A6NED7 52 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 K7EQZ3 153 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPINK7P58062 85 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 DEFB131AP59861 70 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 KPRPQ5T749 579 aaPredicted RBP1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 DNHD1Q96M86 4753 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 DCHS1Q96JQ0 3298 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 CELSR1Q9NYQ6 3014 aa1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 MAP1BP46821 2468 aaKnown RBP1.37□□□□□ -2.19
HMGB3P2-201ENST00000411913 RELNP78509 3460 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 PKDREJQ9NTG1 2253 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 TRGV1A0A0A0MS02 117 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 HTN1P15515 57 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 MP68P56378 58 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 UNQ6190/PRO20217Q6UXQ8 127 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 COA5Q86WW8 74 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 Q8NAQ8 132 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 WFDC10AQ9H1F0 79 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 JMJD1CQ15652 2540 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 WNK1Q9H4A3 2382 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 MED13LQ71F56 2210 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 SDK1Q7Z5N4 2213 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 BSNQ9UPA5 3926 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 DMXL1Q9Y485 3027 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 FAM208BQ5VWN6 2430 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 CEP250Q9BV73 2442 aa1.36□□□□□ -2.19
HMGB3P2-201ENST00000411913 PCNX1Q96RV3 2341 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 CR1P17927 2039 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 ANKHD1Q8IWZ3 2542 aaKnown RBP1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 LAMA5O15230 3695 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 TPRP12270 2363 aaKnown RBP1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 BOD1L1Q8NFC6 3051 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 SVEP1Q4LDE5 3571 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 OTOGQ6ZRI0 2925 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 IGHV6-1A0A0B4J1U7 121 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 IGLV1-51P01701 117 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 PRB1P04280 392 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 DEFB109BQ30KR1 87 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPATA8Q6RVD6 105 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 CASC2Q6XLA1 102 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 ADM2Q7Z4H4 148 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 C6orf48Q9UBA6 75 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 RYR1P21817 5038 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 POLQO75417 2590 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 ASPMQ8IZT6 3477 aa1.35□□□□□ -2.19
HMGB3P2-201ENST00000411913 RYR3Q15413 4870 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 LOC400499M0QZD8 3231 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 FBN2P35556 2912 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 TECTAO75443 2155 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 MUC6Q6W4X9 2439 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 IGKV3OR2-268A0A0C4DH90 116 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 B4DSR2 109 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 H0Y9P7 68 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 H3BUX3 64 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 HRES1P13985 223 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPRR1AP35321 89 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 SPAG11BQ08648 103 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 C1orf137Q5JT78 98 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 KRTAP26-1Q6PEX3 210 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 C10orf99Q6UWK7 81 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 NOP10Q9NPE3 64 aaKnown RBP1.34□□□□□ -2.19
HMGB3P2-201ENST00000411913 NBEAL2Q6ZNJ1 2754 aa1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPTBN4Q9H254 2564 aa1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 CACNA1HO95180 2353 aa1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 NCOR1O75376 2440 aa1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 ATMQ13315 3056 aa1.34□□□□□ -2.2
HMGB3P2-201ENST00000411913 CCDC168Q8NDH2 2452 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 MUC3AQ02505 3323 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 CREBBPQ92793 2442 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 DEFB131BA0A096LNP1 70 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 LY6EQ16553 131 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 LUZP6Q538Z0 58 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 CLPSL2Q6UWE3 100 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 BRD3OSQ6XYD6 125 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 DNAH1Q9P2D7 4330 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 NF1P21359 2839 aa1.33□□□□□ -2.2
HMGB3P2-201ENST00000411913 EP300Q09472 2414 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 CEP290O15078 2479 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 MXRA5Q9NR99 2828 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 MUC2Q02817 5179 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 MMP24-AS1A0A0U1RRL7 71 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 A8MUU9 505 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 CMC4P56277 68 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPAG11AQ6PDA7 123 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 IGFL1Q6UW32 110 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 Q6ZRX8 168 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms