RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 COX7BP24311 80 aa7.58□□□□□ -1.2
HLA-DQB2-229ENST00000411527 RPL37P61927 97 aaKnown RBP7.58□□□□□ -1.2
HLA-DQB2-229ENST00000411527 C1orf195Q5TG92 126 aa7.58□□□□□ -1.2
HLA-DQB2-229ENST00000411527 GTF2H5Q6ZYL4 71 aa7.58□□□□□ -1.2
HLA-DQB2-229ENST00000411527 E9PLD3 99 aa7.57□□□□□ -1.2
HLA-DQB2-229ENST00000411527 K7ERU9 68 aa7.57□□□□□ -1.2
HLA-DQB2-229ENST00000411527 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
HLA-DQB2-229ENST00000411527 Q5XG85 94 aa7.57□□□□□ -1.2
HLA-DQB2-229ENST00000411527 SPANXDQ9BXN6 97 aa7.57□□□□□ -1.2
HLA-DQB2-229ENST00000411527 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
HLA-DQB2-229ENST00000411527 C6orf99Q4VX62 202 aa7.56□□□□□ -1.2
HLA-DQB2-229ENST00000411527 LITAFQ99732 161 aa7.56□□□□□ -1.2
HLA-DQB2-229ENST00000411527 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
HLA-DQB2-229ENST00000411527 COX8AP10176 69 aa7.55□□□□□ -1.2
HLA-DQB2-229ENST00000411527 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
HLA-DQB2-229ENST00000411527 LINC01545Q5VT33 79 aa7.55□□□□□ -1.2
HLA-DQB2-229ENST00000411527 A0A0G2JQZ4 141 aa7.54□□□□□ -1.2
HLA-DQB2-229ENST00000411527 SMIM29Q86T20 159 aa7.54□□□□□ -1.2
HLA-DQB2-229ENST00000411527 VPS25Q9BRG1 176 aa7.53□□□□□ -1.2
HLA-DQB2-229ENST00000411527 TIMM17BO60830 172 aa7.52□□□□□ -1.21
HLA-DQB2-229ENST00000411527 HSD52Q0P140 79 aa7.52□□□□□ -1.21
HLA-DQB2-229ENST00000411527 TAX1BP3O14907 124 aa7.51□□□□□ -1.21
HLA-DQB2-229ENST00000411527 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
HLA-DQB2-229ENST00000411527 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
HLA-DQB2-229ENST00000411527 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
HLA-DQB2-229ENST00000411527 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
HLA-DQB2-229ENST00000411527 C9orf118A6NHY6 69 aa7.48□□□□□ -1.21
HLA-DQB2-229ENST00000411527 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
HLA-DQB2-229ENST00000411527 C21orf62-AS1Q17RA5 79 aa7.48□□□□□ -1.21
HLA-DQB2-229ENST00000411527 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
HLA-DQB2-229ENST00000411527 TCL1BO95988 128 aa7.47□□□□□ -1.21
HLA-DQB2-229ENST00000411527 Q6Q795 121 aa7.47□□□□□ -1.21
HLA-DQB2-229ENST00000411527 TTTY13Q9BZ97 58 aa7.47□□□□□ -1.21
HLA-DQB2-229ENST00000411527 J3QR89 54 aa7.45□□□□□ -1.22
HLA-DQB2-229ENST00000411527 FABP2P12104 132 aa7.45□□□□□ -1.22
HLA-DQB2-229ENST00000411527 K7EP34 96 aa7.44□□□□□ -1.22
HLA-DQB2-229ENST00000411527 HIGD1BQ9P298 99 aa7.44□□□□□ -1.22
HLA-DQB2-229ENST00000411527 KRTAP9-7A8MTY7 169 aa7.43□□□□□ -1.22
HLA-DQB2-229ENST00000411527 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
HLA-DQB2-229ENST00000411527 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
HLA-DQB2-229ENST00000411527 Q6ZVH6 145 aa7.42□□□□□ -1.22
HLA-DQB2-229ENST00000411527 A4D1N5 150 aa7.41□□□□□ -1.22
HLA-DQB2-229ENST00000411527 ATP11AUNQ6ZP68 121 aa7.41□□□□□ -1.22
HLA-DQB2-229ENST00000411527 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
HLA-DQB2-229ENST00000411527 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
HLA-DQB2-229ENST00000411527 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
HLA-DQB2-229ENST00000411527 H3BUT2 72 aa7.4□□□□□ -1.22
HLA-DQB2-229ENST00000411527 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
HLA-DQB2-229ENST00000411527 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
HLA-DQB2-229ENST00000411527 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
HLA-DQB2-229ENST00000411527 F8WEM9 126 aa7.38□□□□□ -1.23
HLA-DQB2-229ENST00000411527 SCGB1A1P11684 91 aa7.38□□□□□ -1.23
HLA-DQB2-229ENST00000411527 OBSCN-AS1Q96MR7 158 aa7.38□□□□□ -1.23
HLA-DQB2-229ENST00000411527 IFITM1P13164 125 aa7.37□□□□□ -1.23
HLA-DQB2-229ENST00000411527 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
HLA-DQB2-229ENST00000411527 SSPOA2VEC9 5147 aa7.37□□□□□ -1.23
HLA-DQB2-229ENST00000411527 USH2AO75445 5202 aa7.36□□□□□ -1.23
HLA-DQB2-229ENST00000411527 CFC1P0CG37 223 aa7.36□□□□□ -1.23
HLA-DQB2-229ENST00000411527 Q75L30 129 aa7.36□□□□□ -1.23
HLA-DQB2-229ENST00000411527 MUSTN1Q8IVN3 82 aa7.36□□□□□ -1.23
HLA-DQB2-229ENST00000411527 SMIM11BQ8TCY0 68 aa7.36□□□□□ -1.23
HLA-DQB2-229ENST00000411527 TMEM238LA0A1B0GVL6 79 aa7.35□□□□□ -1.23
HLA-DQB2-229ENST00000411527 A6NJY4 79 aa7.35□□□□□ -1.23
HLA-DQB2-229ENST00000411527 F8W1H4 67 aa7.35□□□□□ -1.23
HLA-DQB2-229ENST00000411527 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
HLA-DQB2-229ENST00000411527 TRBV7-7A0A0K0K1E9 115 aa7.34□□□□□ -1.23
HLA-DQB2-229ENST00000411527 CEND1Q8N111 149 aa7.34□□□□□ -1.23
HLA-DQB2-229ENST00000411527 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
HLA-DQB2-229ENST00000411527 TRAV13-2A0A0B4J235 113 aa7.33□□□□□ -1.24
HLA-DQB2-229ENST00000411527 Q6JHZ5 121 aa7.33□□□□□ -1.24
HLA-DQB2-229ENST00000411527 IGFL1Q6UW32 110 aa7.32□□□□□ -1.24
HLA-DQB2-229ENST00000411527 CLEC2BQ92478 149 aa7.32□□□□□ -1.24
HLA-DQB2-229ENST00000411527 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
HLA-DQB2-229ENST00000411527 SIGMAR1Q99720 223 aa7.31□□□□□ -1.24
HLA-DQB2-229ENST00000411527 LINC00575Q6W349 94 aa7.3□□□□□ -1.24
HLA-DQB2-229ENST00000411527 Q6ZQY7 126 aa7.3□□□□□ -1.24
HLA-DQB2-229ENST00000411527 MTURNQ8N3F0 131 aa7.3□□□□□ -1.24
HLA-DQB2-229ENST00000411527 Q96NJ1 140 aa7.3□□□□□ -1.24
HLA-DQB2-229ENST00000411527 hADV29S1A0JD25 119 aa7.28□□□□□ -1.24
HLA-DQB2-229ENST00000411527 A0A1B0GV72 72 aa7.27□□□□□ -1.25
HLA-DQB2-229ENST00000411527 LST1O00453 97 aa7.27□□□□□ -1.25
HLA-DQB2-229ENST00000411527 FXYD2P54710 66 aa7.27□□□□□ -1.25
HLA-DQB2-229ENST00000411527 TRBV20-1A0A075B6N2 111 aa7.26□□□□□ -1.25
HLA-DQB2-229ENST00000411527 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
HLA-DQB2-229ENST00000411527 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
HLA-DQB2-229ENST00000411527 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
HLA-DQB2-229ENST00000411527 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
HLA-DQB2-229ENST00000411527 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
HLA-DQB2-229ENST00000411527 A8MUU9 505 aa7.22□□□□□ -1.25
HLA-DQB2-229ENST00000411527 H3BMG7 143 aa7.21□□□□□ -1.26
HLA-DQB2-229ENST00000411527 K7ERJ3 54 aa7.21□□□□□ -1.26
HLA-DQB2-229ENST00000411527 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
HLA-DQB2-229ENST00000411527 MT2AP02795 61 aa7.2□□□□□ -1.26
HLA-DQB2-229ENST00000411527 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
HLA-DQB2-229ENST00000411527 SS18L2Q9UHA2 77 aa7.19□□□□□ -1.26
HLA-DQB2-229ENST00000411527 KRTAP19-1Q8IUB9 90 aa7.18□□□□□ -1.26
HLA-DQB2-229ENST00000411527 ETDBQ3ZM63 59 aa7.17□□□□□ -1.26
HLA-DQB2-229ENST00000411527 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
HLA-DQB2-229ENST00000411527 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
HLA-DQB2-229ENST00000411527 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms