RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
C4orf48-202ENST00000409860 Q8N377 158 aa12.16□□□□□ -0.46
C4orf48-202ENST00000409860 LST1O00453 97 aa12.15□□□□□ -0.46
C4orf48-202ENST00000409860 GHRHP01286 108 aa12.15□□□□□ -0.46
C4orf48-202ENST00000409860 PPDPFLQ8WWR9 84 aa12.15□□□□□ -0.46
C4orf48-202ENST00000409860 TRACP01848 142 aa12.14□□□□□ -0.47
C4orf48-202ENST00000409860 C9orf153Q5TBE3 101 aa12.13□□□□□ -0.47
C4orf48-202ENST00000409860 MOBPQ13875 183 aa12.12□□□□□ -0.47
C4orf48-202ENST00000409860 ATXN8Q156A1 80 aa12.12□□□□□ -0.47
C4orf48-202ENST00000409860 TNXBP22105 4242 aa12.11□□□□□ -0.47
C4orf48-202ENST00000409860 TCL1BO95988 128 aa12.1□□□□□ -0.47
C4orf48-202ENST00000409860 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
C4orf48-202ENST00000409860 Q8NBF4 154 aa12.1□□□□□ -0.47
C4orf48-202ENST00000409860 ORMDL1Q9P0S3 153 aa12.1□□□□□ -0.47
C4orf48-202ENST00000409860 DMBT1Q9UGM3 2413 aaPredicted RBP12.09□□□□□ -0.47
C4orf48-202ENST00000409860 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
C4orf48-202ENST00000409860 F8WEM9 126 aa12.09□□□□□ -0.47
C4orf48-202ENST00000409860 H3BQ85 93 aa12.09□□□□□ -0.47
C4orf48-202ENST00000409860 TRBV20-1A0A075B6N2 111 aa12.08□□□□□ -0.48
C4orf48-202ENST00000409860 FABP2P12104 132 aa12.08□□□□□ -0.48
C4orf48-202ENST00000409860 SSBP3-AS1Q7Z2R9 100 aa12.08□□□□□ -0.48
C4orf48-202ENST00000409860 LINC00304Q8N9R0 145 aa12.05□□□□□ -0.48
C4orf48-202ENST00000409860 TMEM256-PLSCR3K7ERE1 68 aa12.03□□□□□ -0.48
C4orf48-202ENST00000409860 NDUFV3P56181 108 aaKnown RBP12.01□□□□□ -0.49
C4orf48-202ENST00000409860 C4orf48Q5BLP8 95 aa12.01□□□□□ -0.49
C4orf48-202ENST00000409860 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
C4orf48-202ENST00000409860 SPCS1Q9Y6A9 102 aa11.99□□□□□ -0.49
C4orf48-202ENST00000409860 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
C4orf48-202ENST00000409860 BAALC-AS2P0C853 105 aa11.97□□□□□ -0.49
C4orf48-202ENST00000409860 Q6JHZ5 121 aa11.97□□□□□ -0.49
C4orf48-202ENST00000409860 UBE2V1Q13404 147 aa11.96□□□□□ -0.49
C4orf48-202ENST00000409860 C9JAW5 83 aa11.94□□□□□ -0.5
C4orf48-202ENST00000409860 H3BMG7 143 aa11.94□□□□□ -0.5
C4orf48-202ENST00000409860 SPINK1P00995 79 aa11.93□□□□□ -0.5
C4orf48-202ENST00000409860 ANKRD29Q8N6D5 301 aa11.92□□□□□ -0.5
C4orf48-202ENST00000409860 K7EP34 96 aa11.9□□□□□ -0.5
C4orf48-202ENST00000409860 CD164Q04900 197 aa11.9□□□□□ -0.5
C4orf48-202ENST00000409860 IGFL1Q6UW32 110 aa11.9□□□□□ -0.5
C4orf48-202ENST00000409860 A0A0G2JQZ4 141 aa11.89□□□□□ -0.51
C4orf48-202ENST00000409860 HRCT1Q6UXD1 115 aa11.89□□□□□ -0.51
C4orf48-202ENST00000409860 A0A1B0GV72 72 aa11.88□□□□□ -0.51
C4orf48-202ENST00000409860 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
C4orf48-202ENST00000409860 H3BT86 120 aa11.87□□□□□ -0.51
C4orf48-202ENST00000409860 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
C4orf48-202ENST00000409860 MTURNQ8N3F0 131 aa11.84□□□□□ -0.51
C4orf48-202ENST00000409860 HERC1Q15751 4861 aa11.83□□□□□ -0.51
C4orf48-202ENST00000409860 RBM3P98179 157 aaKnown RBP11.83□□□□□ -0.52
C4orf48-202ENST00000409860 LIMD2Q9BT23 127 aa11.83□□□□□ -0.52
C4orf48-202ENST00000409860 JMJD7-PLA2G4BH0Y9G9 81 aa11.81□□□□□ -0.52
C4orf48-202ENST00000409860 DSCR8Q96T75 97 aa11.8□□□□□ -0.52
C4orf48-202ENST00000409860 TRBV7-7A0A0K0K1E9 115 aa11.78□□□□□ -0.52
C4orf48-202ENST00000409860 Q6Q795 121 aa11.78□□□□□ -0.52
C4orf48-202ENST00000409860 TEN1Q86WV5 123 aa11.78□□□□□ -0.52
C4orf48-202ENST00000409860 TRBV7-4A0A0J9YYF1 115 aa11.77□□□□□ -0.53
C4orf48-202ENST00000409860 Q5XG85 94 aa11.75□□□□□ -0.53
C4orf48-202ENST00000409860 A0A1W2PNM2 257 aa11.74□□□□□ -0.53
C4orf48-202ENST00000409860 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
C4orf48-202ENST00000409860 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
C4orf48-202ENST00000409860 CCKP06307 115 aa11.73□□□□□ -0.53
C4orf48-202ENST00000409860 OBSCN-AS1Q96MR7 158 aa11.73□□□□□ -0.53
C4orf48-202ENST00000409860 SMCPP49901 116 aaPredicted RBP11.72□□□□□ -0.53
C4orf48-202ENST00000409860 PDE6GP18545 87 aa11.71□□□□□ -0.53
C4orf48-202ENST00000409860 PRR4Q16378 134 aa11.71□□□□□ -0.53
C4orf48-202ENST00000409860 LOC110117498A0A087WWA1 95 aa11.7□□□□□ -0.54
C4orf48-202ENST00000409860 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
C4orf48-202ENST00000409860 C14orf132Q9NPU4 83 aa11.7□□□□□ -0.54
C4orf48-202ENST00000409860 F8W1H4 67 aa11.69□□□□□ -0.54
C4orf48-202ENST00000409860 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
C4orf48-202ENST00000409860 A0A087WSZ3 146 aa11.68□□□□□ -0.54
C4orf48-202ENST00000409860 C21orf62-AS1Q17RA5 79 aa11.67□□□□□ -0.54
C4orf48-202ENST00000409860 Q6ZQT0 140 aa11.67□□□□□ -0.54
C4orf48-202ENST00000409860 FP248Q71RG6 208 aaPredicted RBP11.67□□□□□ -0.54
C4orf48-202ENST00000409860 A0A1B0GV90 55 aa11.66□□□□□ -0.54
C4orf48-202ENST00000409860 ASB16-AS1Q495Z4 193 aa11.65□□□□□ -0.54
C4orf48-202ENST00000409860 HMCN2Q8NDA2 5059 aa11.63□□□□□ -0.55
C4orf48-202ENST00000409860 IGLV7-46A0A075B6I9 117 aa11.62□□□□□ -0.55
C4orf48-202ENST00000409860 C1orf195Q5TG92 126 aa11.61□□□□□ -0.55
C4orf48-202ENST00000409860 A0A1B0GW54 56 aa11.58□□□□□ -0.56
C4orf48-202ENST00000409860 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
C4orf48-202ENST00000409860 TPRXLQ17RH7 258 aa11.5□□□□□ -0.57
C4orf48-202ENST00000409860 Q96NJ1 140 aa11.49□□□□□ -0.57
C4orf48-202ENST00000409860 LINC00472Q9H8W2 130 aa11.46□□□□□ -0.57
C4orf48-202ENST00000409860 KRTAP13-3Q3SY46 172 aa11.45□□□□□ -0.58
C4orf48-202ENST00000409860 SIGMAR1Q99720 223 aa11.45□□□□□ -0.58
C4orf48-202ENST00000409860 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
C4orf48-202ENST00000409860 NREPQ16612 68 aa11.43□□□□□ -0.58
C4orf48-202ENST00000409860 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
C4orf48-202ENST00000409860 DEFB116Q30KQ4 102 aa11.41□□□□□ -0.58
C4orf48-202ENST00000409860 J3KT08 172 aa11.4□□□□□ -0.58
C4orf48-202ENST00000409860 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
C4orf48-202ENST00000409860 LPAP08519 4548 aa11.36□□□□□ -0.59
C4orf48-202ENST00000409860 LRP2P98164 4655 aa11.36□□□□□ -0.59
C4orf48-202ENST00000409860 Q6ZVQ6 151 aa11.33□□□□□ -0.6
C4orf48-202ENST00000409860 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
C4orf48-202ENST00000409860 LINC00846Q9NV44 126 aa11.33□□□□□ -0.6
C4orf48-202ENST00000409860 NDUFB1O75438 58 aa11.29□□□□□ -0.6
C4orf48-202ENST00000409860 XP32Q5T750 250 aa11.29□□□□□ -0.6
C4orf48-202ENST00000409860 BPY2O14599 106 aa11.28□□□□□ -0.6
C4orf48-202ENST00000409860 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.61
C4orf48-202ENST00000409860 A0A1B0GVX0 72 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms