RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MGAQ8IWI9 3026 aa5.28□□□□□ -1.56
SCN9A-203ENST00000409672 CHD7Q9P2D1 2997 aa5.27□□□□□ -1.57
SCN9A-203ENST00000409672 PRO0461Q9UI25 63 aa5.27□□□□□ -1.57
SCN9A-203ENST00000409672 R4GN34 69 aa5.27□□□□□ -1.57
SCN9A-203ENST00000409672 CNBPP62633 177 aaKnown RBP5.26□□□□□ -1.57
SCN9A-203ENST00000409672 MAST4O15021 2626 aa5.26□□□□□ -1.57
SCN9A-203ENST00000409672 KRTAP1-1Q07627 177 aa5.25□□□□□ -1.57
SCN9A-203ENST00000409672 ASPMQ8IZT6 3477 aa5.25□□□□□ -1.57
SCN9A-203ENST00000409672 HRES1P13985 223 aa5.25□□□□□ -1.57
SCN9A-203ENST00000409672 FRYQ5TBA9 3013 aa5.25□□□□□ -1.57
SCN9A-203ENST00000409672 A0A1W2PNM2 257 aa5.25□□□□□ -1.57
SCN9A-203ENST00000409672 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
SCN9A-203ENST00000409672 A0A1B0GU33 70 aa5.24□□□□□ -1.57
SCN9A-203ENST00000409672 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
SCN9A-203ENST00000409672 PLAC4Q8WY50 150 aa5.23□□□□□ -1.57
SCN9A-203ENST00000409672 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
SCN9A-203ENST00000409672 TEX15Q9BXT5 2789 aa5.23□□□□□ -1.57
SCN9A-203ENST00000409672 LAMA1P25391 3075 aa5.22□□□□□ -1.57
SCN9A-203ENST00000409672 WDFY3Q8IZQ1 3526 aa5.22□□□□□ -1.57
SCN9A-203ENST00000409672 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
SCN9A-203ENST00000409672 Q1T7F1 81 aa5.2□□□□□ -1.58
SCN9A-203ENST00000409672 KRTAP10-2P60368 255 aa5.2□□□□□ -1.58
SCN9A-203ENST00000409672 CHD6Q8TD26 2715 aa5.19□□□□□ -1.58
SCN9A-203ENST00000409672 LCA10Q71F78 164 aa5.19□□□□□ -1.58
SCN9A-203ENST00000409672 HELZ2Q9BYK8 2649 aaKnown RBP5.19□□□□□ -1.58
SCN9A-203ENST00000409672 H1FX-AS1Q4G0G2 97 aa5.18□□□□□ -1.58
SCN9A-203ENST00000409672 KRTAP10-1P60331 282 aa5.17□□□□□ -1.58
SCN9A-203ENST00000409672 M0QZ58 72 aa5.17□□□□□ -1.58
SCN9A-203ENST00000409672 SPINK7P58062 85 aa5.17□□□□□ -1.58
SCN9A-203ENST00000409672 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
SCN9A-203ENST00000409672 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
SCN9A-203ENST00000409672 CENPEQ02224 2701 aa5.16□□□□□ -1.58
SCN9A-203ENST00000409672 H7BZZ5 65 aa5.14□□□□□ -1.59
SCN9A-203ENST00000409672 KTN1-AS1Q86SY8 53 aa5.13□□□□□ -1.59
SCN9A-203ENST00000409672 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
SCN9A-203ENST00000409672 LCE6AA0A183 80 aa5.12□□□□□ -1.59
SCN9A-203ENST00000409672 ASH1LQ9NR48 2969 aaKnown RBP5.12□□□□□ -1.59
SCN9A-203ENST00000409672 KLKP1Q107X0 134 aa5.12□□□□□ -1.59
SCN9A-203ENST00000409672 STAB1Q9NY15 2570 aa5.11□□□□□ -1.59
SCN9A-203ENST00000409672 PLAC8Q9NZF1 115 aa5.11□□□□□ -1.59
SCN9A-203ENST00000409672 TEP1Q99973 2627 aaKnown RBP5.1□□□□□ -1.59
SCN9A-203ENST00000409672 ATMQ13315 3056 aa5.1□□□□□ -1.59
SCN9A-203ENST00000409672 DMAC1Q96GE9 116 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 KRTAP1-5Q9BYS1 174 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 PRAC1Q96KF2 57 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 DCHS1Q96JQ0 3298 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 KALRNO60229 2985 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 BOD1L1Q8NFC6 3051 aa5.08□□□□□ -1.6
SCN9A-203ENST00000409672 DMXL2Q8TDJ6 3036 aa5.07□□□□□ -1.6
SCN9A-203ENST00000409672 Q5W150 140 aa5.07□□□□□ -1.6
SCN9A-203ENST00000409672 NBEAL1Q6ZS30 2694 aa5.07□□□□□ -1.6
SCN9A-203ENST00000409672 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
SCN9A-203ENST00000409672 SETXQ7Z333 2677 aaKnown RBP5.06□□□□□ -1.6
SCN9A-203ENST00000409672 COL6A5A8TX70 2615 aa5.06□□□□□ -1.6
SCN9A-203ENST00000409672 LOC400499M0QZD8 3231 aa5.06□□□□□ -1.6
SCN9A-203ENST00000409672 SPATA8Q6RVD6 105 aa5.06□□□□□ -1.6
SCN9A-203ENST00000409672 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
SCN9A-203ENST00000409672 MAP1AP78559 2803 aaPredicted RBP5.05□□□□□ -1.6
SCN9A-203ENST00000409672 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
SCN9A-203ENST00000409672 KLK9Q2XQG4 91 aa5.04□□□□□ -1.6
SCN9A-203ENST00000409672 LRBAP50851 2863 aa5.03□□□□□ -1.6
SCN9A-203ENST00000409672 FRYLO94915 3013 aa5.03□□□□□ -1.6
SCN9A-203ENST00000409672 OXTP01178 125 aa5.03□□□□□ -1.6
SCN9A-203ENST00000409672 Q8NDZ9 215 aa5.02□□□□□ -1.61
SCN9A-203ENST00000409672 MMP24-AS1A0A0U1RRL7 71 aa5.02□□□□□ -1.61
SCN9A-203ENST00000409672 UNC79Q9P2D8 2635 aa5.01□□□□□ -1.61
SCN9A-203ENST00000409672 TRANK1O15050 2925 aa5.01□□□□□ -1.61
SCN9A-203ENST00000409672 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
SCN9A-203ENST00000409672 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
SCN9A-203ENST00000409672 LAMA5O15230 3695 aa5□□□□□ -1.61
SCN9A-203ENST00000409672 NBPF19A0A087WUL8 3843 aa5□□□□□ -1.61
SCN9A-203ENST00000409672 ADGRG4Q8IZF6 3080 aa5□□□□□ -1.61
SCN9A-203ENST00000409672 PANO1I0J062 215 aa4.99□□□□□ -1.61
SCN9A-203ENST00000409672 A0A087X002 238 aa4.99□□□□□ -1.61
SCN9A-203ENST00000409672 DSPP15924 2871 aaKnown RBP4.97□□□□□ -1.61
SCN9A-203ENST00000409672 COL12A1Q99715 3063 aa4.97□□□□□ -1.61
SCN9A-203ENST00000409672 C20orf166-AS1Q96NR2 134 aa4.97□□□□□ -1.61
SCN9A-203ENST00000409672 ZZEF1O43149 2961 aa4.97□□□□□ -1.61
SCN9A-203ENST00000409672 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
SCN9A-203ENST00000409672 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
SCN9A-203ENST00000409672 A0A1B0GVY2 172 aa4.94□□□□□ -1.62
SCN9A-203ENST00000409672 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
SCN9A-203ENST00000409672 ROMO1P60602 79 aa4.94□□□□□ -1.62
SCN9A-203ENST00000409672 ITPR2Q14571 2701 aa4.93□□□□□ -1.62
SCN9A-203ENST00000409672 NBEAL2Q6ZNJ1 2754 aa4.92□□□□□ -1.62
SCN9A-203ENST00000409672 Q6ZR54 194 aa4.92□□□□□ -1.62
SCN9A-203ENST00000409672 A8MUU9 505 aa4.91□□□□□ -1.62
SCN9A-203ENST00000409672 Q75L30 129 aa4.91□□□□□ -1.62
SCN9A-203ENST00000409672 STAB2Q8WWQ8 2551 aa4.91□□□□□ -1.62
SCN9A-203ENST00000409672 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.62
SCN9A-203ENST00000409672 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
SCN9A-203ENST00000409672 GCN1Q92616 2671 aaKnown RBP4.88□□□□□ -1.63
SCN9A-203ENST00000409672 RELNP78509 3460 aa4.88□□□□□ -1.63
SCN9A-203ENST00000409672 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
SCN9A-203ENST00000409672 H3BS24 57 aa4.88□□□□□ -1.63
SCN9A-203ENST00000409672 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
SCN9A-203ENST00000409672 APCP25054 2843 aa4.87□□□□□ -1.63
SCN9A-203ENST00000409672 TNRC18O15417 2968 aaPredicted RBP4.87□□□□□ -1.63
SCN9A-203ENST00000409672 A8MU10 97 aa4.86□□□□□ -1.63
SCN9A-203ENST00000409672 NOTCH2NLQ7Z3S9 236 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms