RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
CHRNA1-205ENST00000409542 LOC110117498A0A087WWA1 95 aa7.9□□□□□ -1.14
CHRNA1-205ENST00000409542 GHRHP01286 108 aa7.9□□□□□ -1.14
CHRNA1-205ENST00000409542 KRTAP10-8P60410 259 aa7.9□□□□□ -1.14
CHRNA1-205ENST00000409542 LCE2BO14633 110 aa7.89□□□□□ -1.15
CHRNA1-205ENST00000409542 Q6ZRP5 223 aa7.89□□□□□ -1.15
CHRNA1-205ENST00000409542 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
CHRNA1-205ENST00000409542 Q6ZQY7 126 aa7.88□□□□□ -1.15
CHRNA1-205ENST00000409542 FAM236AA0A1B0GUQ0 79 aa7.87□□□□□ -1.15
CHRNA1-205ENST00000409542 FAM236BA0A1B0GV22 79 aa7.87□□□□□ -1.15
CHRNA1-205ENST00000409542 PDE6GP18545 87 aa7.87□□□□□ -1.15
CHRNA1-205ENST00000409542 ATP5EP2Q5VTU8 51 aa7.87□□□□□ -1.15
CHRNA1-205ENST00000409542 Q6ZQT0 140 aa7.87□□□□□ -1.15
CHRNA1-205ENST00000409542 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
CHRNA1-205ENST00000409542 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
CHRNA1-205ENST00000409542 LAMTOR3Q9UHA4 124 aa7.86□□□□□ -1.15
CHRNA1-205ENST00000409542 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
CHRNA1-205ENST00000409542 KCNQ1DNQ9H478 68 aa7.85□□□□□ -1.15
CHRNA1-205ENST00000409542 IGKV2-24A0A0C4DH68 120 aa7.84□□□□□ -1.15
CHRNA1-205ENST00000409542 NKAPP1Q8N9T2 125 aa7.84□□□□□ -1.15
CHRNA1-205ENST00000409542 CCDC179H3BU77 68 aa7.83□□□□□ -1.16
CHRNA1-205ENST00000409542 IGKV3D-7A0A0C4DH55 119 aa7.82□□□□□ -1.16
CHRNA1-205ENST00000409542 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
CHRNA1-205ENST00000409542 UBL5Q9BZL1 73 aa7.82□□□□□ -1.16
CHRNA1-205ENST00000409542 A0A096LNI7 61 aa7.81□□□□□ -1.16
CHRNA1-205ENST00000409542 TRBV7-4A0A0J9YYF1 115 aa7.81□□□□□ -1.16
CHRNA1-205ENST00000409542 ATOX1O00244 68 aa7.81□□□□□ -1.16
CHRNA1-205ENST00000409542 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
CHRNA1-205ENST00000409542 PRYO14603 147 aa7.8□□□□□ -1.16
CHRNA1-205ENST00000409542 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
CHRNA1-205ENST00000409542 B5MCH6 92 aa7.79□□□□□ -1.16
CHRNA1-205ENST00000409542 REG3GQ6UW15 175 aa7.78□□□□□ -1.16
CHRNA1-205ENST00000409542 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
CHRNA1-205ENST00000409542 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
CHRNA1-205ENST00000409542 UQCRQO14949 82 aa7.76□□□□□ -1.17
CHRNA1-205ENST00000409542 SPRR1AP35321 89 aa7.76□□□□□ -1.17
CHRNA1-205ENST00000409542 C3orf22Q8N5N4 141 aa7.76□□□□□ -1.17
CHRNA1-205ENST00000409542 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
CHRNA1-205ENST00000409542 COX7CP15954 63 aa7.75□□□□□ -1.17
CHRNA1-205ENST00000409542 Q6ZRX8 168 aa7.75□□□□□ -1.17
CHRNA1-205ENST00000409542 Q6ZVQ6 151 aa7.75□□□□□ -1.17
CHRNA1-205ENST00000409542 A0A087WVE0 104 aa7.74□□□□□ -1.17
CHRNA1-205ENST00000409542 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
CHRNA1-205ENST00000409542 MUC2Q02817 5179 aa7.74□□□□□ -1.17
CHRNA1-205ENST00000409542 ETDCA0A1B0GVM5 59 aa7.73□□□□□ -1.17
CHRNA1-205ENST00000409542 FAM168BA1KXE4 195 aa7.73□□□□□ -1.17
CHRNA1-205ENST00000409542 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
CHRNA1-205ENST00000409542 CXCL6P80162 114 aa7.72□□□□□ -1.17
CHRNA1-205ENST00000409542 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
CHRNA1-205ENST00000409542 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
CHRNA1-205ENST00000409542 Q8N377 158 aa7.71□□□□□ -1.18
CHRNA1-205ENST00000409542 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 FAM19A1Q7Z5A9 133 aa7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 SERP2Q8N6R1 65 aa7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
CHRNA1-205ENST00000409542 IGLV5-48A0A075B6I7 105 aa7.69□□□□□ -1.18
CHRNA1-205ENST00000409542 A0A1W2PNN7 141 aa7.69□□□□□ -1.18
CHRNA1-205ENST00000409542 BCE1O60756 84 aa7.69□□□□□ -1.18
CHRNA1-205ENST00000409542 Q9BRP9 147 aa7.69□□□□□ -1.18
CHRNA1-205ENST00000409542 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
CHRNA1-205ENST00000409542 CRYGAP11844 174 aa7.68□□□□□ -1.18
CHRNA1-205ENST00000409542 PSORS1C2Q9UIG4 136 aa7.68□□□□□ -1.18
CHRNA1-205ENST00000409542 A0A1B0GW54 56 aa7.67□□□□□ -1.18
CHRNA1-205ENST00000409542 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
CHRNA1-205ENST00000409542 DEFB105AQ8NG35 78 aa7.66□□□□□ -1.18
CHRNA1-205ENST00000409542 PKIGQ9Y2B9 76 aa7.65□□□□□ -1.18
CHRNA1-205ENST00000409542 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
CHRNA1-205ENST00000409542 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
CHRNA1-205ENST00000409542 UBE2BP63146 152 aa7.62□□□□□ -1.19
CHRNA1-205ENST00000409542 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
CHRNA1-205ENST00000409542 SMIM20Q8N5G0 67 aa7.62□□□□□ -1.19
CHRNA1-205ENST00000409542 KRTAP11-1Q8IUC1 163 aa7.62□□□□□ -1.19
CHRNA1-205ENST00000409542 ST20-AS1Q8NBB2 130 aa7.62□□□□□ -1.19
CHRNA1-205ENST00000409542 ERC2-IT1O76042 136 aa7.61□□□□□ -1.19
CHRNA1-205ENST00000409542 NREPQ16612 68 aa7.61□□□□□ -1.19
CHRNA1-205ENST00000409542 TRAV7A0A075B6U4 112 aa7.59□□□□□ -1.19
CHRNA1-205ENST00000409542 Q8NBF4 154 aa7.59□□□□□ -1.19
CHRNA1-205ENST00000409542 A0A1W2PNM2 257 aa7.58□□□□□ -1.2
CHRNA1-205ENST00000409542 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
CHRNA1-205ENST00000409542 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
CHRNA1-205ENST00000409542 PRR4Q16378 134 aa7.57□□□□□ -1.2
CHRNA1-205ENST00000409542 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
CHRNA1-205ENST00000409542 SMIM29Q86T20 159 aa7.57□□□□□ -1.2
CHRNA1-205ENST00000409542 SPRR4Q96PI1 79 aa7.57□□□□□ -1.2
CHRNA1-205ENST00000409542 H0Y9J4 135 aa7.56□□□□□ -1.2
CHRNA1-205ENST00000409542 IGLV8-61A0A075B6I0 122 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 F8WEM9 126 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 BPY2O14599 106 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 IGKV4-1P06312 121 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 TMEM258P61165 79 aa7.55□□□□□ -1.2
CHRNA1-205ENST00000409542 PRLHP81277 87 aa7.53□□□□□ -1.2
CHRNA1-205ENST00000409542 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
CHRNA1-205ENST00000409542 SPRR1BP22528 89 aa7.52□□□□□ -1.21
CHRNA1-205ENST00000409542 A0A0U1RQV1 116 aa7.5□□□□□ -1.21
CHRNA1-205ENST00000409542 HIGD2AQ9BW72 106 aa7.5□□□□□ -1.21
CHRNA1-205ENST00000409542 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
CHRNA1-205ENST00000409542 IGFL1Q6UW32 110 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms