RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TCL1BO95988 128 aa9.85□□□□□ -0.83
TSPAN4-208ENST00000409531 SPRR1BP22528 89 aa9.85□□□□□ -0.83
TSPAN4-208ENST00000409531 PPDPFLQ8WWR9 84 aa9.85□□□□□ -0.83
TSPAN4-208ENST00000409531 H3BQ85 93 aa9.84□□□□□ -0.83
TSPAN4-208ENST00000409531 CRYGAP11844 174 aa9.83□□□□□ -0.84
TSPAN4-208ENST00000409531 LINC01547P58512 204 aaPredicted RBP9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 ANAPC11Q9NYG5 84 aa9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 Q8N377 158 aa9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
TSPAN4-208ENST00000409531 SPCS1Q9Y6A9 102 aa9.81□□□□□ -0.84
TSPAN4-208ENST00000409531 TMEM256-PLSCR3K7ERE1 68 aa9.79□□□□□ -0.84
TSPAN4-208ENST00000409531 A0A087X002 238 aa9.78□□□□□ -0.84
TSPAN4-208ENST00000409531 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
TSPAN4-208ENST00000409531 F8WEM9 126 aa9.76□□□□□ -0.85
TSPAN4-208ENST00000409531 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
TSPAN4-208ENST00000409531 H3BMG7 143 aa9.75□□□□□ -0.85
TSPAN4-208ENST00000409531 GTF2H5Q6ZYL4 71 aa9.75□□□□□ -0.85
TSPAN4-208ENST00000409531 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
TSPAN4-208ENST00000409531 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
TSPAN4-208ENST00000409531 C9JAW5 83 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 K7EP34 96 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 BAALC-AS2P0C853 105 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 C9orf153Q5TBE3 101 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 C3orf22Q8N5N4 141 aa9.74□□□□□ -0.85
TSPAN4-208ENST00000409531 TNXBP22105 4242 aa9.73□□□□□ -0.85
TSPAN4-208ENST00000409531 Q8NBF4 154 aa9.73□□□□□ -0.85
TSPAN4-208ENST00000409531 NDUFV3P56181 108 aaKnown RBP9.72□□□□□ -0.85
TSPAN4-208ENST00000409531 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
TSPAN4-208ENST00000409531 MOBPQ13875 183 aa9.72□□□□□ -0.85
TSPAN4-208ENST00000409531 SSBP3-AS1Q7Z2R9 100 aa9.72□□□□□ -0.85
TSPAN4-208ENST00000409531 H3BT86 120 aa9.69□□□□□ -0.86
TSPAN4-208ENST00000409531 ANKRD29Q8N6D5 301 aa9.68□□□□□ -0.86
TSPAN4-208ENST00000409531 IGLV8-61A0A075B6I0 122 aa9.67□□□□□ -0.86
TSPAN4-208ENST00000409531 Q6JHZ5 121 aa9.67□□□□□ -0.86
TSPAN4-208ENST00000409531 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
TSPAN4-208ENST00000409531 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
TSPAN4-208ENST00000409531 LINC00304Q8N9R0 145 aa9.63□□□□□ -0.87
TSPAN4-208ENST00000409531 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
TSPAN4-208ENST00000409531 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
TSPAN4-208ENST00000409531 RNF213Q63HN8 5207 aa9.62□□□□□ -0.87
TSPAN4-208ENST00000409531 RBM3P98179 157 aaKnown RBP9.61□□□□□ -0.87
TSPAN4-208ENST00000409531 A0A1B0GV90 55 aa9.6□□□□□ -0.87
TSPAN4-208ENST00000409531 F8W1H4 67 aa9.6□□□□□ -0.87
TSPAN4-208ENST00000409531 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
TSPAN4-208ENST00000409531 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
TSPAN4-208ENST00000409531 A0A1B0GV72 72 aa9.58□□□□□ -0.88
TSPAN4-208ENST00000409531 CD164Q04900 197 aa9.58□□□□□ -0.88
TSPAN4-208ENST00000409531 DSCR8Q96T75 97 aa9.58□□□□□ -0.88
TSPAN4-208ENST00000409531 SPINK1P00995 79 aa9.57□□□□□ -0.88
TSPAN4-208ENST00000409531 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
TSPAN4-208ENST00000409531 OBSCN-AS1Q96MR7 158 aa9.56□□□□□ -0.88
TSPAN4-208ENST00000409531 TRBV7-4A0A0J9YYF1 115 aa9.55□□□□□ -0.88
TSPAN4-208ENST00000409531 PDE6GP18545 87 aa9.55□□□□□ -0.88
TSPAN4-208ENST00000409531 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
TSPAN4-208ENST00000409531 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
TSPAN4-208ENST00000409531 C21orf62-AS1Q17RA5 79 aa9.54□□□□□ -0.88
TSPAN4-208ENST00000409531 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
TSPAN4-208ENST00000409531 Q6Q795 121 aa9.53□□□□□ -0.88
TSPAN4-208ENST00000409531 HRCT1Q6UXD1 115 aa9.53□□□□□ -0.88
TSPAN4-208ENST00000409531 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
TSPAN4-208ENST00000409531 CCKP06307 115 aa9.51□□□□□ -0.89
TSPAN4-208ENST00000409531 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
TSPAN4-208ENST00000409531 C14orf132Q9NPU4 83 aa9.51□□□□□ -0.89
TSPAN4-208ENST00000409531 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
TSPAN4-208ENST00000409531 A0A1W2PNM2 257 aa9.48□□□□□ -0.89
TSPAN4-208ENST00000409531 Q6ZQT0 140 aa9.48□□□□□ -0.89
TSPAN4-208ENST00000409531 LRP2P98164 4655 aa9.48□□□□□ -0.89
TSPAN4-208ENST00000409531 VPS25Q9BRG1 176 aa9.47□□□□□ -0.89
TSPAN4-208ENST00000409531 ETDBQ3ZM63 59 aa9.46□□□□□ -0.9
TSPAN4-208ENST00000409531 Q5XG85 94 aa9.46□□□□□ -0.9
TSPAN4-208ENST00000409531 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
TSPAN4-208ENST00000409531 A0A1B0GW54 56 aa9.44□□□□□ -0.9
TSPAN4-208ENST00000409531 A0A087WSZ3 146 aa9.42□□□□□ -0.9
TSPAN4-208ENST00000409531 PRR4Q16378 134 aa9.39□□□□□ -0.91
TSPAN4-208ENST00000409531 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
TSPAN4-208ENST00000409531 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
TSPAN4-208ENST00000409531 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
TSPAN4-208ENST00000409531 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
TSPAN4-208ENST00000409531 NREPQ16612 68 aa9.29□□□□□ -0.92
TSPAN4-208ENST00000409531 LPAP08519 4548 aa9.28□□□□□ -0.92
TSPAN4-208ENST00000409531 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
TSPAN4-208ENST00000409531 Q96NJ1 140 aa9.26□□□□□ -0.93
TSPAN4-208ENST00000409531 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
TSPAN4-208ENST00000409531 ACYP1P07311 99 aa9.25□□□□□ -0.93
TSPAN4-208ENST00000409531 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
TSPAN4-208ENST00000409531 J3KT08 172 aa9.24□□□□□ -0.93
TSPAN4-208ENST00000409531 J3QR89 54 aa9.24□□□□□ -0.93
TSPAN4-208ENST00000409531 UBL5Q9BZL1 73 aa9.24□□□□□ -0.93
TSPAN4-208ENST00000409531 IGKV4-1P06312 121 aa9.23□□□□□ -0.93
TSPAN4-208ENST00000409531 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
TSPAN4-208ENST00000409531 SIGMAR1Q99720 223 aa9.22□□□□□ -0.93
TSPAN4-208ENST00000409531 Q6ZVQ6 151 aa9.21□□□□□ -0.94
TSPAN4-208ENST00000409531 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
TSPAN4-208ENST00000409531 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
TSPAN4-208ENST00000409531 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
TSPAN4-208ENST00000409531 BPY2O14599 106 aa9.16□□□□□ -0.94
TSPAN4-208ENST00000409531 NDUFB1O75438 58 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms