RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 Q8N1X5 172 aa10.95□□□□□ -0.66
SMPD4-202ENST00000409031 ATRQ13535 2644 aa10.95□□□□□ -0.66
SMPD4-202ENST00000409031 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
SMPD4-202ENST00000409031 ASB16-AS1Q495Z4 193 aa10.94□□□□□ -0.66
SMPD4-202ENST00000409031 WDFY4Q6ZS81 3184 aa10.93□□□□□ -0.66
SMPD4-202ENST00000409031 A0A087WTM6 91 aa10.93□□□□□ -0.66
SMPD4-202ENST00000409031 KRTAP1-3Q8IUG1 177 aa10.91□□□□□ -0.66
SMPD4-202ENST00000409031 KRTAP29-1A8MX34 341 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-202ENST00000409031 LCE6AA0A183 80 aa10.9□□□□□ -0.66
SMPD4-202ENST00000409031 A0A1B0GU33 70 aa10.9□□□□□ -0.66
SMPD4-202ENST00000409031 ITPR3Q14573 2671 aa10.9□□□□□ -0.66
SMPD4-202ENST00000409031 CDH23Q9H251 3354 aa10.89□□□□□ -0.67
SMPD4-202ENST00000409031 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
SMPD4-202ENST00000409031 UNC79Q9P2D8 2635 aa10.87□□□□□ -0.67
SMPD4-202ENST00000409031 K7EIL1 84 aa10.86□□□□□ -0.67
SMPD4-202ENST00000409031 GCN1Q92616 2671 aaKnown RBP10.86□□□□□ -0.67
SMPD4-202ENST00000409031 XIRP2A4UGR9 3374 aa10.86□□□□□ -0.67
SMPD4-202ENST00000409031 DSPP15924 2871 aaKnown RBP10.85□□□□□ -0.67
SMPD4-202ENST00000409031 A6NN06 94 aa10.84□□□□□ -0.67
SMPD4-202ENST00000409031 LINC00304Q8N9R0 145 aa10.84□□□□□ -0.67
SMPD4-202ENST00000409031 KRTAP1-1Q07627 177 aa10.84□□□□□ -0.67
SMPD4-202ENST00000409031 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-202ENST00000409031 NBEAQ8NFP9 2946 aa10.82□□□□□ -0.68
SMPD4-202ENST00000409031 Q6ZR54 194 aa10.82□□□□□ -0.68
SMPD4-202ENST00000409031 MAST4O15021 2626 aa10.81□□□□□ -0.68
SMPD4-202ENST00000409031 FRYQ5TBA9 3013 aa10.81□□□□□ -0.68
SMPD4-202ENST00000409031 Q5W150 140 aa10.8□□□□□ -0.68
SMPD4-202ENST00000409031 A0A0D9SG42 100 aa10.77□□□□□ -0.68
SMPD4-202ENST00000409031 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
SMPD4-202ENST00000409031 VPS13AQ96RL7 3174 aa10.75□□□□□ -0.69
SMPD4-202ENST00000409031 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
SMPD4-202ENST00000409031 FREM2Q5SZK8 3169 aa10.73□□□□□ -0.69
SMPD4-202ENST00000409031 SZT2Q5T011 3432 aa10.73□□□□□ -0.69
SMPD4-202ENST00000409031 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-202ENST00000409031 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
SMPD4-202ENST00000409031 IGSF10Q6WRI0 2623 aa10.69□□□□□ -0.7
SMPD4-202ENST00000409031 NBEAL2Q6ZNJ1 2754 aa10.69□□□□□ -0.7
SMPD4-202ENST00000409031 SPATA8Q6RVD6 105 aa10.68□□□□□ -0.7
SMPD4-202ENST00000409031 MAP1AP78559 2803 aaPredicted RBP10.68□□□□□ -0.7
SMPD4-202ENST00000409031 A8MU10 97 aa10.64□□□□□ -0.71
SMPD4-202ENST00000409031 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
SMPD4-202ENST00000409031 NBEAL1Q6ZS30 2694 aa10.64□□□□□ -0.71
SMPD4-202ENST00000409031 LUZP6Q538Z0 58 aa10.62□□□□□ -0.71
SMPD4-202ENST00000409031 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
SMPD4-202ENST00000409031 KALRNO60229 2985 aa10.6□□□□□ -0.71
SMPD4-202ENST00000409031 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
SMPD4-202ENST00000409031 COL6A3P12111 3177 aa10.58□□□□□ -0.72
SMPD4-202ENST00000409031 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
SMPD4-202ENST00000409031 TNRC18O15417 2968 aaPredicted RBP10.55□□□□□ -0.72
SMPD4-202ENST00000409031 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
SMPD4-202ENST00000409031 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
SMPD4-202ENST00000409031 BAHCC1Q9P281 2608 aa10.5□□□□□ -0.73
SMPD4-202ENST00000409031 LAMA1P25391 3075 aa10.5□□□□□ -0.73
SMPD4-202ENST00000409031 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
SMPD4-202ENST00000409031 ROMO1P60602 79 aa10.49□□□□□ -0.73
SMPD4-202ENST00000409031 A0A087X002 238 aa10.47□□□□□ -0.73
SMPD4-202ENST00000409031 KRTAP1-5Q9BYS1 174 aa10.47□□□□□ -0.73
SMPD4-202ENST00000409031 RPL37P61927 97 aaKnown RBP10.46□□□□□ -0.73
SMPD4-202ENST00000409031 COL6A5A8TX70 2615 aa10.46□□□□□ -0.73
SMPD4-202ENST00000409031 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
SMPD4-202ENST00000409031 CELSR3Q9NYQ7 3312 aa10.45□□□□□ -0.74
SMPD4-202ENST00000409031 H1FX-AS1Q4G0G2 97 aa10.45□□□□□ -0.74
SMPD4-202ENST00000409031 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
SMPD4-202ENST00000409031 FLNCQ14315 2725 aa10.43□□□□□ -0.74
SMPD4-202ENST00000409031 FRYLO94915 3013 aa10.43□□□□□ -0.74
SMPD4-202ENST00000409031 NOTCH2NLQ7Z3S9 236 aa10.4□□□□□ -0.74
SMPD4-202ENST00000409031 KRTAP25-1Q3LHN0 102 aa10.4□□□□□ -0.75
SMPD4-202ENST00000409031 DMBT1Q9UGM3 2413 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-202ENST00000409031 VCANP13611 3396 aa10.39□□□□□ -0.75
SMPD4-202ENST00000409031 KRTAP7-1Q8IUC3 87 aa10.37□□□□□ -0.75
SMPD4-202ENST00000409031 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-202ENST00000409031 A0A0A0MQY5 61 aa10.36□□□□□ -0.75
SMPD4-202ENST00000409031 ADGRG4Q8IZF6 3080 aa10.34□□□□□ -0.75
SMPD4-202ENST00000409031 DMXL2Q8TDJ6 3036 aa10.32□□□□□ -0.76
SMPD4-202ENST00000409031 UBR5O95071 2799 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-202ENST00000409031 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-202ENST00000409031 DNAH14Q0VDD8 3507 aa10.28□□□□□ -0.76
SMPD4-202ENST00000409031 ATMQ13315 3056 aa10.28□□□□□ -0.76
SMPD4-202ENST00000409031 PANO1I0J062 215 aa10.27□□□□□ -0.77
SMPD4-202ENST00000409031 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
SMPD4-202ENST00000409031 ASH1LQ9NR48 2969 aaKnown RBP10.25□□□□□ -0.77
SMPD4-202ENST00000409031 S4R3F8 94 aa10.25□□□□□ -0.77
SMPD4-202ENST00000409031 COL12A1Q99715 3063 aa10.24□□□□□ -0.77
SMPD4-202ENST00000409031 BOD1L1Q8NFC6 3051 aa10.23□□□□□ -0.77
SMPD4-202ENST00000409031 KRTAP16-1A8MUX0 517 aa10.23□□□□□ -0.77
SMPD4-202ENST00000409031 TACC2O95359 2948 aa10.22□□□□□ -0.77
SMPD4-202ENST00000409031 EYSQ5T1H1 3165 aa10.2□□□□□ -0.78
SMPD4-202ENST00000409031 STAB2Q8WWQ8 2551 aa10.19□□□□□ -0.78
SMPD4-202ENST00000409031 CAMK2N1Q7Z7J9 78 aa10.17□□□□□ -0.78
SMPD4-202ENST00000409031 COX6B2Q6YFQ2 88 aa10.16□□□□□ -0.78
SMPD4-202ENST00000409031 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
SMPD4-202ENST00000409031 LRBAP50851 2863 aa10.15□□□□□ -0.78
SMPD4-202ENST00000409031 REV3LO60673 3130 aa10.15□□□□□ -0.78
SMPD4-202ENST00000409031 ITPR2Q14571 2701 aa10.15□□□□□ -0.78
SMPD4-202ENST00000409031 DMXL1Q9Y485 3027 aa10.14□□□□□ -0.79
SMPD4-202ENST00000409031 APCP25054 2843 aa10.13□□□□□ -0.79
SMPD4-202ENST00000409031 Q6ZSA8 131 aa10.11□□□□□ -0.79
SMPD4-202ENST00000409031 SPTBN5Q9NRC6 3674 aaKnown RBP10.09□□□□□ -0.79
SMPD4-202ENST00000409031 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
SMPD4-202ENST00000409031 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms