RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 UBR5O95071 2799 aaPredicted RBP4.71□□□□□ -1.65
HDAC9-202ENST00000405010 APCP25054 2843 aa4.71□□□□□ -1.66
HDAC9-202ENST00000405010 CASC10Q5T4H9 136 aa4.71□□□□□ -1.66
HDAC9-202ENST00000405010 Q75L30 129 aa4.71□□□□□ -1.66
HDAC9-202ENST00000405010 CIRBP-AS1Q8TBR5 109 aa4.71□□□□□ -1.66
HDAC9-202ENST00000405010 UTP20O75691 2785 aaKnown RBP4.71□□□□□ -1.66
HDAC9-202ENST00000405010 FBN2P35556 2912 aa4.71□□□□□ -1.66
HDAC9-202ENST00000405010 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
HDAC9-202ENST00000405010 KRTAP1-3Q8IUG1 177 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 C8orf17Q9NRJ1 99 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 BAHCC1Q9P281 2608 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 NF1P21359 2839 aa4.7□□□□□ -1.66
HDAC9-202ENST00000405010 TEP1Q99973 2627 aaKnown RBP4.7□□□□□ -1.66
HDAC9-202ENST00000405010 MRPL34Q9BQ48 92 aaKnown RBP4.7□□□□□ -1.66
HDAC9-202ENST00000405010 IGSF10Q6WRI0 2623 aa4.69□□□□□ -1.66
HDAC9-202ENST00000405010 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
HDAC9-202ENST00000405010 HELZ2Q9BYK8 2649 aaKnown RBP4.69□□□□□ -1.66
HDAC9-202ENST00000405010 IGLV7-46A0A075B6I9 117 aa4.69□□□□□ -1.66
HDAC9-202ENST00000405010 SPRR1AP35321 89 aa4.69□□□□□ -1.66
HDAC9-202ENST00000405010 C4orf48Q5BLP8 95 aa4.69□□□□□ -1.66
HDAC9-202ENST00000405010 MAST4O15021 2626 aa4.68□□□□□ -1.66
HDAC9-202ENST00000405010 TNP2Q05952 138 aa4.68□□□□□ -1.66
HDAC9-202ENST00000405010 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
HDAC9-202ENST00000405010 FLNBO75369 2602 aaKnown RBP4.68□□□□□ -1.66
HDAC9-202ENST00000405010 SPINK1P00995 79 aa4.67□□□□□ -1.66
HDAC9-202ENST00000405010 COL6A5A8TX70 2615 aa4.67□□□□□ -1.66
HDAC9-202ENST00000405010 PRR26Q8N8Z3 221 aa4.67□□□□□ -1.66
HDAC9-202ENST00000405010 KRTAP26-1Q6PEX3 210 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 RELNP78509 3460 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 A0A1B0GVX0 72 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 K7ERS5 55 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 LCE6AA0A183 80 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 CELSR2Q9HCU4 2923 aa4.66□□□□□ -1.66
HDAC9-202ENST00000405010 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.66
HDAC9-202ENST00000405010 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.66
HDAC9-202ENST00000405010 IGKV2-30P06310 120 aa4.65□□□□□ -1.66
HDAC9-202ENST00000405010 MDFIQ99750 246 aa4.65□□□□□ -1.66
HDAC9-202ENST00000405010 KRTAP1-1Q07627 177 aa4.65□□□□□ -1.67
HDAC9-202ENST00000405010 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
HDAC9-202ENST00000405010 MXRA5Q9NR99 2828 aa4.64□□□□□ -1.67
HDAC9-202ENST00000405010 A8MU10 97 aa4.64□□□□□ -1.67
HDAC9-202ENST00000405010 UQCR11O14957 56 aa4.64□□□□□ -1.67
HDAC9-202ENST00000405010 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
HDAC9-202ENST00000405010 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
HDAC9-202ENST00000405010 SPINK7P58062 85 aa4.62□□□□□ -1.67
HDAC9-202ENST00000405010 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
HDAC9-202ENST00000405010 CELSR1Q9NYQ6 3014 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 LINC00472Q9H8W2 130 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 CRYBG3Q68DQ2 2970 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 KRTAP10-11P60412 298 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
HDAC9-202ENST00000405010 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
HDAC9-202ENST00000405010 FAM229AH3BQW9 127 aa4.6□□□□□ -1.67
HDAC9-202ENST00000405010 HRES1P13985 223 aa4.6□□□□□ -1.67
HDAC9-202ENST00000405010 LINC00313P59037 77 aa4.59□□□□□ -1.67
HDAC9-202ENST00000405010 C9orf163Q8N9P6 203 aa4.59□□□□□ -1.68
HDAC9-202ENST00000405010 HIVEP1P15822 2718 aa4.58□□□□□ -1.68
HDAC9-202ENST00000405010 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
HDAC9-202ENST00000405010 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
HDAC9-202ENST00000405010 SVEP1Q4LDE5 3571 aa4.56□□□□□ -1.68
HDAC9-202ENST00000405010 NIPBLQ6KC79 2804 aaeCLIP4.56□□□□□ -1.68
HDAC9-202ENST00000405010 IGLV5-52A0A0A0MRZ9 124 aa4.56□□□□□ -1.68
HDAC9-202ENST00000405010 STAB1Q9NY15 2570 aa4.55□□□□□ -1.68
HDAC9-202ENST00000405010 A6NN06 94 aa4.55□□□□□ -1.68
HDAC9-202ENST00000405010 SPRR1BP22528 89 aa4.55□□□□□ -1.68
HDAC9-202ENST00000405010 SPENQ96T58 3664 aaKnown RBP4.55□□□□□ -1.68
HDAC9-202ENST00000405010 NBDYA0A0U1RRE5 68 aa4.55□□□□□ -1.68
HDAC9-202ENST00000405010 NUPR2A6NF83 97 aa4.54□□□□□ -1.68
HDAC9-202ENST00000405010 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
HDAC9-202ENST00000405010 ITPR2Q14571 2701 aa4.54□□□□□ -1.68
HDAC9-202ENST00000405010 SPACA4Q8TDM5 124 aa4.54□□□□□ -1.68
HDAC9-202ENST00000405010 KRTAP24-1Q3LI83 254 aa4.53□□□□□ -1.68
HDAC9-202ENST00000405010 ZNF861PO60384 105 aa4.52□□□□□ -1.69
HDAC9-202ENST00000405010 H3BS24 57 aa4.52□□□□□ -1.69
HDAC9-202ENST00000405010 RTL8CO15255 209 aa4.51□□□□□ -1.69
HDAC9-202ENST00000405010 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
HDAC9-202ENST00000405010 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
HDAC9-202ENST00000405010 Q6ZR54 194 aa4.5□□□□□ -1.69
HDAC9-202ENST00000405010 CUBNO60494 3623 aa4.49□□□□□ -1.69
HDAC9-202ENST00000405010 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
HDAC9-202ENST00000405010 K7EIL1 84 aa4.48□□□□□ -1.69
HDAC9-202ENST00000405010 LY6G6CO95867 125 aa4.48□□□□□ -1.69
HDAC9-202ENST00000405010 BSNQ9UPA5 3926 aa4.48□□□□□ -1.69
HDAC9-202ENST00000405010 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
HDAC9-202ENST00000405010 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
HDAC9-202ENST00000405010 C1orf134Q5TEV5 83 aa4.47□□□□□ -1.69
HDAC9-202ENST00000405010 Q96NJ1 140 aa4.47□□□□□ -1.69
HDAC9-202ENST00000405010 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.46□□□□□ -1.7
HDAC9-202ENST00000405010 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
HDAC9-202ENST00000405010 A0A087WTM6 91 aa4.44□□□□□ -1.7
HDAC9-202ENST00000405010 Q5W150 140 aa4.44□□□□□ -1.7
HDAC9-202ENST00000405010 Q8N1X5 172 aa4.44□□□□□ -1.7
HDAC9-202ENST00000405010 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
HDAC9-202ENST00000405010 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
HDAC9-202ENST00000405010 KRTAP11-1Q8IUC1 163 aa4.43□□□□□ -1.7
HDAC9-202ENST00000405010 A0A087X002 238 aa4.43□□□□□ -1.7
HDAC9-202ENST00000405010 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms