RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SPTBN5Q9NRC6 3674 aaKnown RBP6.13□□□□□ -1.43
PTPRM-203ENST00000400060 CFAP54Q96N23 3096 aa6.12□□□□□ -1.43
PTPRM-203ENST00000400060 RTL8CO15255 209 aa6.12□□□□□ -1.43
PTPRM-203ENST00000400060 NBDYA0A0U1RRE5 68 aa6.11□□□□□ -1.43
PTPRM-203ENST00000400060 ZNF861PO60384 105 aa6.11□□□□□ -1.43
PTPRM-203ENST00000400060 MGAQ8IWI9 3026 aa6.11□□□□□ -1.43
PTPRM-203ENST00000400060 DNAH14Q0VDD8 3507 aa6.11□□□□□ -1.43
PTPRM-203ENST00000400060 ROMO1P60602 79 aa6.1□□□□□ -1.43
PTPRM-203ENST00000400060 HECTD1Q9ULT8 2610 aa6.1□□□□□ -1.43
PTPRM-203ENST00000400060 Q5W150 140 aa6.1□□□□□ -1.43
PTPRM-203ENST00000400060 KRTAP10-11P60412 298 aa6.1□□□□□ -1.43
PTPRM-203ENST00000400060 Q96NJ1 140 aa6.09□□□□□ -1.43
PTPRM-203ENST00000400060 ITPR3Q14573 2671 aa6.08□□□□□ -1.44
PTPRM-203ENST00000400060 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
PTPRM-203ENST00000400060 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
PTPRM-203ENST00000400060 FLNBO75369 2602 aaKnown RBP6.07□□□□□ -1.44
PTPRM-203ENST00000400060 SPACA4Q8TDM5 124 aa6.05□□□□□ -1.44
PTPRM-203ENST00000400060 CENPEQ02224 2701 aa6.05□□□□□ -1.44
PTPRM-203ENST00000400060 K7EIL1 84 aa6.04□□□□□ -1.44
PTPRM-203ENST00000400060 CR1P17927 2039 aa6.03□□□□□ -1.44
PTPRM-203ENST00000400060 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
PTPRM-203ENST00000400060 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
PTPRM-203ENST00000400060 LAMA1P25391 3075 aa6.03□□□□□ -1.44
PTPRM-203ENST00000400060 WDFY4Q6ZS81 3184 aa6.03□□□□□ -1.44
PTPRM-203ENST00000400060 NOTCH2NLQ7Z3S9 236 aa6.03□□□□□ -1.44
PTPRM-203ENST00000400060 APLNQ9ULZ1 77 aa6.02□□□□□ -1.45
PTPRM-203ENST00000400060 USP24Q9UPU5 2620 aa6.02□□□□□ -1.45
PTPRM-203ENST00000400060 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
PTPRM-203ENST00000400060 ATRQ13535 2644 aa6.01□□□□□ -1.45
PTPRM-203ENST00000400060 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
PTPRM-203ENST00000400060 CFAP46Q8IYW2 2715 aa6□□□□□ -1.45
PTPRM-203ENST00000400060 HELZ2Q9BYK8 2649 aaKnown RBP5.98□□□□□ -1.45
PTPRM-203ENST00000400060 AKAP13Q12802 2813 aa5.98□□□□□ -1.45
PTPRM-203ENST00000400060 VPS13AQ96RL7 3174 aa5.98□□□□□ -1.45
PTPRM-203ENST00000400060 CASC10Q5T4H9 136 aa5.98□□□□□ -1.45
PTPRM-203ENST00000400060 USP34Q70CQ2 3546 aa5.98□□□□□ -1.45
PTPRM-203ENST00000400060 MGAM2Q2M2H8 2515 aa5.97□□□□□ -1.45
PTPRM-203ENST00000400060 Q8N1X5 172 aa5.97□□□□□ -1.45
PTPRM-203ENST00000400060 VCANP13611 3396 aa5.97□□□□□ -1.45
PTPRM-203ENST00000400060 SPEGQ15772 3267 aa5.97□□□□□ -1.45
PTPRM-203ENST00000400060 MYO15AQ9UKN7 3530 aa5.96□□□□□ -1.46
PTPRM-203ENST00000400060 RPL37P61927 97 aaKnown RBP5.95□□□□□ -1.46
PTPRM-203ENST00000400060 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
PTPRM-203ENST00000400060 COL6A3P12111 3177 aa5.95□□□□□ -1.46
PTPRM-203ENST00000400060 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
PTPRM-203ENST00000400060 PANO1I0J062 215 aa5.94□□□□□ -1.46
PTPRM-203ENST00000400060 A0A087WTM6 91 aa5.92□□□□□ -1.46
PTPRM-203ENST00000400060 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
PTPRM-203ENST00000400060 DSPP15924 2871 aaKnown RBP5.91□□□□□ -1.46
PTPRM-203ENST00000400060 FRYLO94915 3013 aa5.91□□□□□ -1.46
PTPRM-203ENST00000400060 MAST4O15021 2626 aa5.9□□□□□ -1.47
PTPRM-203ENST00000400060 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
PTPRM-203ENST00000400060 FRYQ5TBA9 3013 aa5.89□□□□□ -1.47
PTPRM-203ENST00000400060 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
PTPRM-203ENST00000400060 A8MUU9 505 aa5.89□□□□□ -1.47
PTPRM-203ENST00000400060 CHD6Q8TD26 2715 aa5.88□□□□□ -1.47
PTPRM-203ENST00000400060 A0A0D9SG42 100 aa5.86□□□□□ -1.47
PTPRM-203ENST00000400060 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
PTPRM-203ENST00000400060 MUC3AQ02505 3323 aa5.84□□□□□ -1.47
PTPRM-203ENST00000400060 IGSF10Q6WRI0 2623 aa5.84□□□□□ -1.47
PTPRM-203ENST00000400060 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
PTPRM-203ENST00000400060 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
PTPRM-203ENST00000400060 MAP1AP78559 2803 aaPredicted RBP5.83□□□□□ -1.48
PTPRM-203ENST00000400060 SEC61BP60468 96 aaKnown RBP5.82□□□□□ -1.48
PTPRM-203ENST00000400060 GCN1Q92616 2671 aaKnown RBP5.82□□□□□ -1.48
PTPRM-203ENST00000400060 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
PTPRM-203ENST00000400060 DMDP11532 3685 aa5.81□□□□□ -1.48
PTPRM-203ENST00000400060 NBEAQ8NFP9 2946 aa5.81□□□□□ -1.48
PTPRM-203ENST00000400060 UNC79Q9P2D8 2635 aa5.8□□□□□ -1.48
PTPRM-203ENST00000400060 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
PTPRM-203ENST00000400060 TEX15Q9BXT5 2789 aa5.78□□□□□ -1.48
PTPRM-203ENST00000400060 CELSR3Q9NYQ7 3312 aa5.77□□□□□ -1.49
PTPRM-203ENST00000400060 WDFY3Q8IZQ1 3526 aa5.76□□□□□ -1.49
PTPRM-203ENST00000400060 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
PTPRM-203ENST00000400060 SETXQ7Z333 2677 aaKnown RBP5.75□□□□□ -1.49
PTPRM-203ENST00000400060 KRTAP13-1Q8IUC0 172 aa5.75□□□□□ -1.49
PTPRM-203ENST00000400060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
PTPRM-203ENST00000400060 ADGRG4Q8IZF6 3080 aa5.74□□□□□ -1.49
PTPRM-203ENST00000400060 FREM2Q5SZK8 3169 aa5.74□□□□□ -1.49
PTPRM-203ENST00000400060 KALRNO60229 2985 aa5.72□□□□□ -1.49
PTPRM-203ENST00000400060 FLNCQ14315 2725 aa5.72□□□□□ -1.49
PTPRM-203ENST00000400060 NBEAL2Q6ZNJ1 2754 aa5.72□□□□□ -1.49
PTPRM-203ENST00000400060 ATMQ13315 3056 aa5.71□□□□□ -1.5
PTPRM-203ENST00000400060 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
PTPRM-203ENST00000400060 NOTCH1P46531 2555 aa5.7□□□□□ -1.5
PTPRM-203ENST00000400060 COL6A5A8TX70 2615 aa5.69□□□□□ -1.5
PTPRM-203ENST00000400060 TEP1Q99973 2627 aaKnown RBP5.69□□□□□ -1.5
PTPRM-203ENST00000400060 S4R3F8 94 aa5.69□□□□□ -1.5
PTPRM-203ENST00000400060 UBR5O95071 2799 aaPredicted RBP5.69□□□□□ -1.5
PTPRM-203ENST00000400060 BOD1L1Q8NFC6 3051 aa5.68□□□□□ -1.5
PTPRM-203ENST00000400060 C9orf92A6NGG3 77 aa5.68□□□□□ -1.5
PTPRM-203ENST00000400060 STAB1Q9NY15 2570 aa5.68□□□□□ -1.5
PTPRM-203ENST00000400060 Q6ZSA8 131 aa5.68□□□□□ -1.5
PTPRM-203ENST00000400060 ITPR1Q14643 2758 aa5.66□□□□□ -1.5
PTPRM-203ENST00000400060 H0YAA0 97 aa5.65□□□□□ -1.51
PTPRM-203ENST00000400060 DMXL2Q8TDJ6 3036 aa5.64□□□□□ -1.51
PTPRM-203ENST00000400060 LRBAP50851 2863 aa5.64□□□□□ -1.51
PTPRM-203ENST00000400060 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
PTPRM-203ENST00000400060 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
PTPRM-203ENST00000400060 COL12A1Q99715 3063 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms