RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 GOLGB1Q14789 3259 aaKnown RBP6.91□□□□□ -1.3
LAMA3-203ENST00000399516 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
LAMA3-203ENST00000399516 CAMK2N1Q7Z7J9 78 aa6.91□□□□□ -1.3
LAMA3-203ENST00000399516 S4R3F8 94 aa6.91□□□□□ -1.3
LAMA3-203ENST00000399516 OXTP01178 125 aa6.91□□□□□ -1.3
LAMA3-203ENST00000399516 TNP2Q05952 138 aa6.88□□□□□ -1.31
LAMA3-203ENST00000399516 CHD6Q8TD26 2715 aa6.88□□□□□ -1.31
LAMA3-203ENST00000399516 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
LAMA3-203ENST00000399516 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
LAMA3-203ENST00000399516 UNC79Q9P2D8 2635 aa6.86□□□□□ -1.31
LAMA3-203ENST00000399516 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
LAMA3-203ENST00000399516 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
LAMA3-203ENST00000399516 SPRR1BP22528 89 aa6.86□□□□□ -1.31
LAMA3-203ENST00000399516 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
LAMA3-203ENST00000399516 ROMO1P60602 79 aa6.78□□□□□ -1.32
LAMA3-203ENST00000399516 STAB1Q9NY15 2570 aa6.77□□□□□ -1.33
LAMA3-203ENST00000399516 TEX15Q9BXT5 2789 aa6.77□□□□□ -1.33
LAMA3-203ENST00000399516 Q6ZR54 194 aa6.75□□□□□ -1.33
LAMA3-203ENST00000399516 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
LAMA3-203ENST00000399516 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
LAMA3-203ENST00000399516 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
LAMA3-203ENST00000399516 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
LAMA3-203ENST00000399516 COL6A5A8TX70 2615 aa6.72□□□□□ -1.33
LAMA3-203ENST00000399516 R4GN34 69 aa6.72□□□□□ -1.33
LAMA3-203ENST00000399516 M0R2T5 61 aa6.71□□□□□ -1.34
LAMA3-203ENST00000399516 ZNF292O60281 2723 aa6.7□□□□□ -1.34
LAMA3-203ENST00000399516 TEP1Q99973 2627 aaKnown RBP6.7□□□□□ -1.34
LAMA3-203ENST00000399516 SETXQ7Z333 2677 aaKnown RBP6.68□□□□□ -1.34
LAMA3-203ENST00000399516 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
LAMA3-203ENST00000399516 KRTAP4-16G5E9R7 235 aaPredicted RBP6.68□□□□□ -1.34
LAMA3-203ENST00000399516 C5orf42Q9H799 3197 aa6.67□□□□□ -1.34
LAMA3-203ENST00000399516 UTRNP46939 3433 aa6.67□□□□□ -1.34
LAMA3-203ENST00000399516 CHD7Q9P2D1 2997 aa6.66□□□□□ -1.34
LAMA3-203ENST00000399516 NBEAL2Q6ZNJ1 2754 aa6.66□□□□□ -1.34
LAMA3-203ENST00000399516 CEP350Q5VT06 3117 aa6.65□□□□□ -1.35
LAMA3-203ENST00000399516 MAP1AP78559 2803 aaPredicted RBP6.65□□□□□ -1.35
LAMA3-203ENST00000399516 CHD9Q3L8U1 2897 aa6.64□□□□□ -1.35
LAMA3-203ENST00000399516 M0QZ58 72 aa6.64□□□□□ -1.35
LAMA3-203ENST00000399516 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
LAMA3-203ENST00000399516 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
LAMA3-203ENST00000399516 TRANK1O15050 2925 aa6.63□□□□□ -1.35
LAMA3-203ENST00000399516 STAB2Q8WWQ8 2551 aa6.63□□□□□ -1.35
LAMA3-203ENST00000399516 A6NN06 94 aa6.61□□□□□ -1.35
LAMA3-203ENST00000399516 KMT2BQ9UMN6 2715 aaPredicted RBP6.58□□□□□ -1.36
LAMA3-203ENST00000399516 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
LAMA3-203ENST00000399516 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
LAMA3-203ENST00000399516 Q5VSD8 79 aa6.58□□□□□ -1.36
LAMA3-203ENST00000399516 PANO1I0J062 215 aa6.57□□□□□ -1.36
LAMA3-203ENST00000399516 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
LAMA3-203ENST00000399516 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
LAMA3-203ENST00000399516 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
LAMA3-203ENST00000399516 IGSF10Q6WRI0 2623 aa6.54□□□□□ -1.36
LAMA3-203ENST00000399516 LCE6AA0A183 80 aa6.54□□□□□ -1.36
LAMA3-203ENST00000399516 CFAP54Q96N23 3096 aa6.53□□□□□ -1.36
LAMA3-203ENST00000399516 MGAQ8IWI9 3026 aa6.53□□□□□ -1.36
LAMA3-203ENST00000399516 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
LAMA3-203ENST00000399516 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
LAMA3-203ENST00000399516 A0A087X002 238 aa6.52□□□□□ -1.37
LAMA3-203ENST00000399516 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
LAMA3-203ENST00000399516 APCP25054 2843 aa6.52□□□□□ -1.37
LAMA3-203ENST00000399516 ITPR1Q14643 2758 aa6.51□□□□□ -1.37
LAMA3-203ENST00000399516 DSPP15924 2871 aaKnown RBP6.47□□□□□ -1.37
LAMA3-203ENST00000399516 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
LAMA3-203ENST00000399516 UBR5O95071 2799 aaPredicted RBP6.46□□□□□ -1.38
LAMA3-203ENST00000399516 A0A0C4DFX4 3053 aa6.45□□□□□ -1.38
LAMA3-203ENST00000399516 UTP20O75691 2785 aaKnown RBP6.44□□□□□ -1.38
LAMA3-203ENST00000399516 A8MU10 97 aa6.44□□□□□ -1.38
LAMA3-203ENST00000399516 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
LAMA3-203ENST00000399516 PCNTO95613 3336 aa6.43□□□□□ -1.38
LAMA3-203ENST00000399516 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
LAMA3-203ENST00000399516 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
LAMA3-203ENST00000399516 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
LAMA3-203ENST00000399516 FLNCQ14315 2725 aa6.35□□□□□ -1.39
LAMA3-203ENST00000399516 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
LAMA3-203ENST00000399516 Q6ZRN7 208 aaPredicted RBP6.34□□□□□ -1.39
LAMA3-203ENST00000399516 KRTAP13-1Q8IUC0 172 aa6.34□□□□□ -1.4
LAMA3-203ENST00000399516 A8MUU9 505 aa6.33□□□□□ -1.4
LAMA3-203ENST00000399516 FRYQ5TBA9 3013 aa6.32□□□□□ -1.4
LAMA3-203ENST00000399516 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
LAMA3-203ENST00000399516 HTTP42858 3142 aa6.31□□□□□ -1.4
LAMA3-203ENST00000399516 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
LAMA3-203ENST00000399516 RANBP2P49792 3224 aaKnown RBP6.28□□□□□ -1.4
LAMA3-203ENST00000399516 HIVEP1P15822 2718 aa6.26□□□□□ -1.41
LAMA3-203ENST00000399516 LRBAP50851 2863 aa6.26□□□□□ -1.41
LAMA3-203ENST00000399516 LAMA2P24043 3122 aaKnown RBP6.26□□□□□ -1.41
LAMA3-203ENST00000399516 KALRNO60229 2985 aa6.21□□□□□ -1.41
LAMA3-203ENST00000399516 WDFY4Q6ZS81 3184 aa6.18□□□□□ -1.42
LAMA3-203ENST00000399516 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
LAMA3-203ENST00000399516 NIPBLQ6KC79 2804 aaeCLIP6.17□□□□□ -1.42
LAMA3-203ENST00000399516 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
LAMA3-203ENST00000399516 VPS13AQ96RL7 3174 aa6.16□□□□□ -1.42
LAMA3-203ENST00000399516 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.42
LAMA3-203ENST00000399516 TRIOO75962 3097 aa6.15□□□□□ -1.42
LAMA3-203ENST00000399516 PRUNE2Q8WUY3 3088 aa6.14□□□□□ -1.43
LAMA3-203ENST00000399516 TNP1P09430 55 aa6.12□□□□□ -1.43
LAMA3-203ENST00000399516 ASH1LQ9NR48 2969 aaKnown RBP6.11□□□□□ -1.43
LAMA3-203ENST00000399516 LAMA3Q16787 3333 aa6.1□□□□□ -1.43
LAMA3-203ENST00000399516 XIRP2A4UGR9 3374 aa6.07□□□□□ -1.44
LAMA3-203ENST00000399516 H0YAA0 97 aa6.07□□□□□ -1.44
LAMA3-203ENST00000399516 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms