RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 ZCCHC13Q8WW36 166 aaKnown RBP9.6□□□□□ -0.87
ITSN1-210ENST00000399353 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
ITSN1-210ENST00000399353 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
ITSN1-210ENST00000399353 KCNQ1DNQ9H478 68 aa9.59□□□□□ -0.87
ITSN1-210ENST00000399353 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
ITSN1-210ENST00000399353 VWFP04275 2813 aa9.57□□□□□ -0.88
ITSN1-210ENST00000399353 STAB1Q9NY15 2570 aa9.57□□□□□ -0.88
ITSN1-210ENST00000399353 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
ITSN1-210ENST00000399353 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
ITSN1-210ENST00000399353 KRTAP10-3P60369 221 aa9.56□□□□□ -0.88
ITSN1-210ENST00000399353 C7orf65Q6ZTY9 151 aa9.55□□□□□ -0.88
ITSN1-210ENST00000399353 PKD1L1Q8TDX9 2849 aa9.54□□□□□ -0.88
ITSN1-210ENST00000399353 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
ITSN1-210ENST00000399353 MDFIQ99750 246 aa9.52□□□□□ -0.89
ITSN1-210ENST00000399353 NBPF19A0A087WUL8 3843 aa9.51□□□□□ -0.89
ITSN1-210ENST00000399353 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
ITSN1-210ENST00000399353 SPINK7P58062 85 aa9.5□□□□□ -0.89
ITSN1-210ENST00000399353 CDC42SE1Q9NRR8 79 aa9.5□□□□□ -0.89
ITSN1-210ENST00000399353 IGLV1-50A0A075B6I6 118 aa9.49□□□□□ -0.89
ITSN1-210ENST00000399353 A0A1B0GW54 56 aa9.49□□□□□ -0.89
ITSN1-210ENST00000399353 MOBPQ13875 183 aa9.49□□□□□ -0.89
ITSN1-210ENST00000399353 IGLV9-49A0A0B4J1Y8 123 aa9.49□□□□□ -0.89
ITSN1-210ENST00000399353 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
ITSN1-210ENST00000399353 LCE6AA0A183 80 aa9.47□□□□□ -0.89
ITSN1-210ENST00000399353 IGHV6-1A0A0B4J1U7 121 aa9.46□□□□□ -0.89
ITSN1-210ENST00000399353 Q75L30 129 aa9.46□□□□□ -0.89
ITSN1-210ENST00000399353 NSD1Q96L73 2696 aaPredicted RBP9.46□□□□□ -0.9
ITSN1-210ENST00000399353 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
ITSN1-210ENST00000399353 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
ITSN1-210ENST00000399353 PRR26Q8N8Z3 221 aa9.45□□□□□ -0.9
ITSN1-210ENST00000399353 H3BS24 57 aa9.44□□□□□ -0.9
ITSN1-210ENST00000399353 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
ITSN1-210ENST00000399353 SPANXA2-OT1Q8N9U9 137 aa9.44□□□□□ -0.9
ITSN1-210ENST00000399353 AKAP9Q99996 3911 aa9.43□□□□□ -0.9
ITSN1-210ENST00000399353 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
ITSN1-210ENST00000399353 A6NN06 94 aa9.42□□□□□ -0.9
ITSN1-210ENST00000399353 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
ITSN1-210ENST00000399353 LINC00313P59037 77 aa9.41□□□□□ -0.9
ITSN1-210ENST00000399353 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
ITSN1-210ENST00000399353 TNP2Q05952 138 aa9.4□□□□□ -0.9
ITSN1-210ENST00000399353 A8MWP4 228 aa9.39□□□□□ -0.91
ITSN1-210ENST00000399353 KRTAP1-1Q07627 177 aa9.39□□□□□ -0.91
ITSN1-210ENST00000399353 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
ITSN1-210ENST00000399353 H3BPC8 53 aa9.39□□□□□ -0.91
ITSN1-210ENST00000399353 RETNLBQ9BQ08 111 aa9.38□□□□□ -0.91
ITSN1-210ENST00000399353 CHTF8P0CG12 524 aa9.37□□□□□ -0.91
ITSN1-210ENST00000399353 PHF5AQ7RTV0 110 aaKnown RBP9.37□□□□□ -0.91
ITSN1-210ENST00000399353 IGLV7-46A0A075B6I9 117 aa9.34□□□□□ -0.91
ITSN1-210ENST00000399353 IGLV8-61A0A075B6I0 122 aa9.34□□□□□ -0.91
ITSN1-210ENST00000399353 KRTAP26-1Q6PEX3 210 aa9.33□□□□□ -0.92
ITSN1-210ENST00000399353 TENM1Q9UKZ4 2725 aa9.3□□□□□ -0.92
ITSN1-210ENST00000399353 TENM3Q9P273 2699 aa9.3□□□□□ -0.92
ITSN1-210ENST00000399353 KRTAP29-1A8MX34 341 aaPredicted RBP9.3□□□□□ -0.92
ITSN1-210ENST00000399353 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
ITSN1-210ENST00000399353 HRES1P13985 223 aa9.29□□□□□ -0.92
ITSN1-210ENST00000399353 KRTAP4-16G5E9R7 235 aaPredicted RBP9.29□□□□□ -0.92
ITSN1-210ENST00000399353 C9orf163Q8N9P6 203 aa9.29□□□□□ -0.92
ITSN1-210ENST00000399353 FLG2Q5D862 2391 aaPredicted RBP9.28□□□□□ -0.92
ITSN1-210ENST00000399353 H3BNG1 76 aa9.27□□□□□ -0.92
ITSN1-210ENST00000399353 KRTAP10-11P60412 298 aa9.27□□□□□ -0.93
ITSN1-210ENST00000399353 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
ITSN1-210ENST00000399353 A0A1B0GU69 56 aa9.26□□□□□ -0.93
ITSN1-210ENST00000399353 SPRR1AP35321 89 aa9.26□□□□□ -0.93
ITSN1-210ENST00000399353 DNAH10OSP0CZ25 163 aa9.24□□□□□ -0.93
ITSN1-210ENST00000399353 C14orf177Q52M58 125 aa9.24□□□□□ -0.93
ITSN1-210ENST00000399353 FBN1P35555 2871 aaKnown RBP9.24□□□□□ -0.93
ITSN1-210ENST00000399353 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
ITSN1-210ENST00000399353 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
ITSN1-210ENST00000399353 K7EIL1 84 aa9.22□□□□□ -0.93
ITSN1-210ENST00000399353 TP53AIP1Q9HCN2 124 aa9.22□□□□□ -0.93
ITSN1-210ENST00000399353 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
ITSN1-210ENST00000399353 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
ITSN1-210ENST00000399353 SPINK1P00995 79 aa9.2□□□□□ -0.94
ITSN1-210ENST00000399353 STAB2Q8WWQ8 2551 aa9.19□□□□□ -0.94
ITSN1-210ENST00000399353 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
ITSN1-210ENST00000399353 ANAPC11Q9NYG5 84 aa9.18□□□□□ -0.94
ITSN1-210ENST00000399353 ZNF469Q96JG9 3925 aaPredicted RBP9.18□□□□□ -0.94
ITSN1-210ENST00000399353 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
ITSN1-210ENST00000399353 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
ITSN1-210ENST00000399353 COL7A1Q02388 2944 aa9.17□□□□□ -0.94
ITSN1-210ENST00000399353 IGLV5-37A0A075B6J1 123 aa9.17□□□□□ -0.94
ITSN1-210ENST00000399353 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
ITSN1-210ENST00000399353 ACYP2P14621 99 aa9.16□□□□□ -0.94
ITSN1-210ENST00000399353 CSAG1Q6PB30 78 aa9.15□□□□□ -0.95
ITSN1-210ENST00000399353 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.95
ITSN1-210ENST00000399353 KRTAP24-1Q3LI83 254 aa9.13□□□□□ -0.95
ITSN1-210ENST00000399353 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
ITSN1-210ENST00000399353 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
ITSN1-210ENST00000399353 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
ITSN1-210ENST00000399353 CSMD3Q7Z407 3707 aa9.12□□□□□ -0.95
ITSN1-210ENST00000399353 KMT2BQ9UMN6 2715 aaPredicted RBP9.1□□□□□ -0.95
ITSN1-210ENST00000399353 A0A087X002 238 aa9.08□□□□□ -0.96
ITSN1-210ENST00000399353 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
ITSN1-210ENST00000399353 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
ITSN1-210ENST00000399353 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
ITSN1-210ENST00000399353 UQCR11O14957 56 aa9.07□□□□□ -0.96
ITSN1-210ENST00000399353 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
ITSN1-210ENST00000399353 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
ITSN1-210ENST00000399353 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
ITSN1-210ENST00000399353 RTL8CO15255 209 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms