RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
TTC3-204ENST00000399017 S4R3F8 94 aa3.28□□□□□ -1.88
TTC3-204ENST00000399017 KRTAP10-11P60412 298 aa3.28□□□□□ -1.88
TTC3-204ENST00000399017 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
TTC3-204ENST00000399017 PRR34Q9NV39 138 aa3.28□□□□□ -1.89
TTC3-204ENST00000399017 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
TTC3-204ENST00000399017 RANBP2P49792 3224 aaKnown RBP3.27□□□□□ -1.89
TTC3-204ENST00000399017 WIPF1O43516 503 aa3.27□□□□□ -1.89
TTC3-204ENST00000399017 COA5Q86WW8 74 aa3.27□□□□□ -1.89
TTC3-204ENST00000399017 LINC00612Q8N6U2 182 aa3.27□□□□□ -1.89
TTC3-204ENST00000399017 SPRR4Q96PI1 79 aa3.26□□□□□ -1.89
TTC3-204ENST00000399017 DSPP15924 2871 aaKnown RBP3.26□□□□□ -1.89
TTC3-204ENST00000399017 FAM168BA1KXE4 195 aa3.26□□□□□ -1.89
TTC3-204ENST00000399017 CDH23Q9H251 3354 aa3.26□□□□□ -1.89
TTC3-204ENST00000399017 A0A0D9SG42 100 aa3.26□□□□□ -1.89
TTC3-204ENST00000399017 DMAC1Q96GE9 116 aa3.26□□□□□ -1.89
TTC3-204ENST00000399017 GCN1Q92616 2671 aaKnown RBP3.26□□□□□ -1.89
TTC3-204ENST00000399017 TNRC18O15417 2968 aaPredicted RBP3.26□□□□□ -1.89
TTC3-204ENST00000399017 FREM2Q5SZK8 3169 aa3.25□□□□□ -1.89
TTC3-204ENST00000399017 Q6ZPA2 131 aa3.25□□□□□ -1.89
TTC3-204ENST00000399017 MAP1AP78559 2803 aaPredicted RBP3.24□□□□□ -1.89
TTC3-204ENST00000399017 SPANXA2-OT1Q8N9U9 137 aa3.24□□□□□ -1.89
TTC3-204ENST00000399017 P0C880 135 aa3.24□□□□□ -1.89
TTC3-204ENST00000399017 Q1T7F1 81 aa3.24□□□□□ -1.89
TTC3-204ENST00000399017 FLNCQ14315 2725 aa3.24□□□□□ -1.89
TTC3-204ENST00000399017 HTTP42858 3142 aa3.23□□□□□ -1.89
TTC3-204ENST00000399017 LINC01546A6NGU7 62 aa3.23□□□□□ -1.89
TTC3-204ENST00000399017 H1FX-AS1Q4G0G2 97 aa3.23□□□□□ -1.89
TTC3-204ENST00000399017 LCE6AA0A183 80 aa3.23□□□□□ -1.89
TTC3-204ENST00000399017 LCA10Q71F78 164 aa3.23□□□□□ -1.89
TTC3-204ENST00000399017 A0A1W2PNM2 257 aa3.22□□□□□ -1.89
TTC3-204ENST00000399017 TSPEAR-AS2P59090 65 aa3.22□□□□□ -1.89
TTC3-204ENST00000399017 CRIP3Q6Q6R5 217 aa3.22□□□□□ -1.89
TTC3-204ENST00000399017 COL6A3P12111 3177 aa3.21□□□□□ -1.89
TTC3-204ENST00000399017 NBPF19A0A087WUL8 3843 aa3.21□□□□□ -1.9
TTC3-204ENST00000399017 GAS8-AS1O95177 125 aa3.21□□□□□ -1.9
TTC3-204ENST00000399017 NSD1Q96L73 2696 aaPredicted RBP3.21□□□□□ -1.9
TTC3-204ENST00000399017 KRTAP21-3Q3LHN1 58 aa3.21□□□□□ -1.9
TTC3-204ENST00000399017 FAM218AQ96MZ4 157 aa3.21□□□□□ -1.9
TTC3-204ENST00000399017 A0A1B0GU33 70 aa3.2□□□□□ -1.9
TTC3-204ENST00000399017 Q8N377 158 aa3.2□□□□□ -1.9
TTC3-204ENST00000399017 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
TTC3-204ENST00000399017 CHD7Q9P2D1 2997 aa3.2□□□□□ -1.9
TTC3-204ENST00000399017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.19□□□□□ -1.9
TTC3-204ENST00000399017 TRANK1O15050 2925 aa3.19□□□□□ -1.9
TTC3-204ENST00000399017 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
TTC3-204ENST00000399017 KRTAP16-1A8MUX0 517 aa3.18□□□□□ -1.9
TTC3-204ENST00000399017 PLAC8Q9NZF1 115 aa3.18□□□□□ -1.9
TTC3-204ENST00000399017 COL12A1Q99715 3063 aa3.18□□□□□ -1.9
TTC3-204ENST00000399017 Q8N1X5 172 aa3.18□□□□□ -1.9
TTC3-204ENST00000399017 SZT2Q5T011 3432 aa3.18□□□□□ -1.9
TTC3-204ENST00000399017 UBR5O95071 2799 aaPredicted RBP3.18□□□□□ -1.9
TTC3-204ENST00000399017 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
TTC3-204ENST00000399017 ZCCHC13Q8WW36 166 aaKnown RBP3.16□□□□□ -1.9
TTC3-204ENST00000399017 A0A1W2PNN7 141 aa3.15□□□□□ -1.9
TTC3-204ENST00000399017 KLK9Q2XQG4 91 aa3.15□□□□□ -1.9
TTC3-204ENST00000399017 ANAPC11Q9NYG5 84 aa3.15□□□□□ -1.91
TTC3-204ENST00000399017 DMXL2Q8TDJ6 3036 aa3.15□□□□□ -1.91
TTC3-204ENST00000399017 TENM1Q9UKZ4 2725 aa3.14□□□□□ -1.91
TTC3-204ENST00000399017 KLKP1Q107X0 134 aa3.14□□□□□ -1.91
TTC3-204ENST00000399017 SPINK7P58062 85 aa3.13□□□□□ -1.91
TTC3-204ENST00000399017 ATMQ13315 3056 aa3.13□□□□□ -1.91
TTC3-204ENST00000399017 M0QZ58 72 aa3.13□□□□□ -1.91
TTC3-204ENST00000399017 SPTBN5Q9NRC6 3674 aaKnown RBP3.12□□□□□ -1.91
TTC3-204ENST00000399017 CFAP47Q6ZTR5 3102 aa3.12□□□□□ -1.91
TTC3-204ENST00000399017 ADGRG4Q8IZF6 3080 aa3.12□□□□□ -1.91
TTC3-204ENST00000399017 ASPMQ8IZT6 3477 aa3.12□□□□□ -1.91
TTC3-204ENST00000399017 NBEAQ8NFP9 2946 aa3.11□□□□□ -1.91
TTC3-204ENST00000399017 OCR1Q9BZK8 76 aa3.1□□□□□ -1.91
TTC3-204ENST00000399017 KALRNO60229 2985 aa3.1□□□□□ -1.91
TTC3-204ENST00000399017 CHD9Q3L8U1 2897 aa3.1□□□□□ -1.91
TTC3-204ENST00000399017 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
TTC3-204ENST00000399017 NF1P21359 2839 aa3.09□□□□□ -1.91
TTC3-204ENST00000399017 KRTAP10-3P60369 221 aa3.09□□□□□ -1.91
TTC3-204ENST00000399017 RPS29P62273 56 aaKnown RBP3.09□□□□□ -1.91
TTC3-204ENST00000399017 A0A096LNT2 108 aa3.09□□□□□ -1.91
TTC3-204ENST00000399017 EYSQ5T1H1 3165 aa3.09□□□□□ -1.91
TTC3-204ENST00000399017 PRAC1Q96KF2 57 aa3.09□□□□□ -1.91
TTC3-204ENST00000399017 A0A096LNJ9 63 aa3.09□□□□□ -1.92
TTC3-204ENST00000399017 RPL37P61927 97 aaKnown RBP3.09□□□□□ -1.92
TTC3-204ENST00000399017 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
TTC3-204ENST00000399017 LRBAP50851 2863 aa3.08□□□□□ -1.92
TTC3-204ENST00000399017 URB1-AS1Q96HZ7 61 aa3.08□□□□□ -1.92
TTC3-204ENST00000399017 NBEAL2Q6ZNJ1 2754 aa3.08□□□□□ -1.92
TTC3-204ENST00000399017 GIG44P09565 113 aaPredicted RBP3.07□□□□□ -1.92
TTC3-204ENST00000399017 KRTAP1-3Q8IUG1 177 aa3.06□□□□□ -1.92
TTC3-204ENST00000399017 Q8N9P0 234 aaPredicted RBP3.06□□□□□ -1.92
TTC3-204ENST00000399017 ZFHX4Q86UP3 3567 aa3.05□□□□□ -1.92
TTC3-204ENST00000399017 C20orf166-AS1Q96NR2 134 aa3.05□□□□□ -1.92
TTC3-204ENST00000399017 ROMO1P60602 79 aa3.04□□□□□ -1.92
TTC3-204ENST00000399017 ZFHX3Q15911 3703 aa3.04□□□□□ -1.92
TTC3-204ENST00000399017 TENM3Q9P273 2699 aa3.04□□□□□ -1.92
TTC3-204ENST00000399017 DMXL1Q9Y485 3027 aa3.04□□□□□ -1.92
TTC3-204ENST00000399017 WDFY3Q8IZQ1 3526 aa3.04□□□□□ -1.92
TTC3-204ENST00000399017 SPRR1BP22528 89 aa3.03□□□□□ -1.92
TTC3-204ENST00000399017 ADM2Q7Z4H4 148 aa3.03□□□□□ -1.92
TTC3-204ENST00000399017 TNP1P09430 55 aa3.03□□□□□ -1.92
TTC3-204ENST00000399017 Q5W150 140 aa3.02□□□□□ -1.93
TTC3-204ENST00000399017 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
TTC3-204ENST00000399017 KRTAP1-1Q07627 177 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms