RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 PSCAO43653 123 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 Q8N1X5 172 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 DHRS4-AS1Q9P1J3 65 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 A0A087WSZ3 146 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 LINC00476Q8WZB0 136 aa6.34□□□□□ -1.39
PTCHD4-202ENST00000398738 HCG22E2RYF7 251 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 INAFM1C9JVW0 142 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 PRLHP81277 87 aa6.33□□□□□ -1.4
PTCHD4-202ENST00000398738 STAB1Q9NY15 2570 aa6.32□□□□□ -1.4
PTCHD4-202ENST00000398738 NBEAL1Q6ZS30 2694 aa6.32□□□□□ -1.4
PTCHD4-202ENST00000398738 NSD1Q96L73 2696 aaPredicted RBP6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 DEFB131BA0A096LNP1 70 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 PMAIP1Q13794 54 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 IGLV1-50A0A075B6I6 118 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 MP68P56378 58 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
PTCHD4-202ENST00000398738 CHKB-CPT1BH3BT56 60 aa6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
PTCHD4-202ENST00000398738 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 Q1T7F1 81 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
PTCHD4-202ENST00000398738 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
PTCHD4-202ENST00000398738 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP4-16G5E9R7 235 aaPredicted RBP6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 PRR15LQ9BU68 103 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 REG3GQ6UW15 175 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
PTCHD4-202ENST00000398738 H0Y9P7 68 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 PRR15Q8IV56 129 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 LCE6AA0A183 80 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
PTCHD4-202ENST00000398738 H0Y9J4 135 aa6.24□□□□□ -1.41
PTCHD4-202ENST00000398738 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 UBE2AP49459 152 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 NDUFB1O75438 58 aa6.23□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 SPRR1AP35321 89 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 Q5VV11 94 aa6.22□□□□□ -1.41
PTCHD4-202ENST00000398738 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
PTCHD4-202ENST00000398738 A6NED7 52 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 A0A1B0GW54 56 aa6.2□□□□□ -1.42
PTCHD4-202ENST00000398738 CHTF8P0CG12 524 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 ANK2Q01484 3957 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 H3BNG1 76 aa6.19□□□□□ -1.42
PTCHD4-202ENST00000398738 Q8N9P0 234 aaPredicted RBP6.18□□□□□ -1.42
PTCHD4-202ENST00000398738 TLX1NBP0CAT3 122 aa6.18□□□□□ -1.42
PTCHD4-202ENST00000398738 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 NDUFS5O43920 106 aa6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 CNBPP62633 177 aaKnown RBP6.17□□□□□ -1.42
PTCHD4-202ENST00000398738 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 PHF5AQ7RTV0 110 aaKnown RBP6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
PTCHD4-202ENST00000398738 COA5Q86WW8 74 aa6.15□□□□□ -1.43
PTCHD4-202ENST00000398738 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
PTCHD4-202ENST00000398738 STAB2Q8WWQ8 2551 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 LIMD2Q9BT23 127 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 DNAH10Q8IVF4 4471 aa6.13□□□□□ -1.43
PTCHD4-202ENST00000398738 LCA10Q71F78 164 aa6.12□□□□□ -1.43
PTCHD4-202ENST00000398738 A8MWP4 228 aa6.12□□□□□ -1.43
PTCHD4-202ENST00000398738 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
PTCHD4-202ENST00000398738 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 IGHV6-1A0A0B4J1U7 121 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 LINC00472Q9H8W2 130 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP1-5Q9BYS1 174 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 CD164Q04900 197 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-2Q9BYQ4 174 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 LYSTQ99698 3801 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
PTCHD4-202ENST00000398738 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 UBE2DNLQ8IWF7 75 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 ANAPC11Q9NYG5 84 aa6.05□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-9Q9BYP9 154 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 H3BPC8 53 aa6.04□□□□□ -1.44
PTCHD4-202ENST00000398738 SPINK7P58062 85 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms