RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 HECTD1Q9ULT8 2610 aa9.17□□□□□ -0.94
GNE-202ENST00000396594 RPL37P61927 97 aaKnown RBP9.17□□□□□ -0.94
GNE-202ENST00000396594 HELZ2Q9BYK8 2649 aaKnown RBP9.15□□□□□ -0.95
GNE-202ENST00000396594 ITPR3Q14573 2671 aa9.13□□□□□ -0.95
GNE-202ENST00000396594 Q5VV11 94 aa9.13□□□□□ -0.95
GNE-202ENST00000396594 H1FX-AS1Q4G0G2 97 aa9.12□□□□□ -0.95
GNE-202ENST00000396594 ROMO1P60602 79 aa9.06□□□□□ -0.96
GNE-202ENST00000396594 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
GNE-202ENST00000396594 PANO1I0J062 215 aa9.01□□□□□ -0.97
GNE-202ENST00000396594 FLNBO75369 2602 aaKnown RBP9.01□□□□□ -0.97
GNE-202ENST00000396594 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
GNE-202ENST00000396594 M0QZ58 72 aa8.99□□□□□ -0.97
GNE-202ENST00000396594 A0A087X002 238 aa8.98□□□□□ -0.97
GNE-202ENST00000396594 MGAM2Q2M2H8 2515 aa8.98□□□□□ -0.97
GNE-202ENST00000396594 ATRQ13535 2644 aa8.94□□□□□ -0.98
GNE-202ENST00000396594 CENPFP49454 3210 aa8.93□□□□□ -0.98
GNE-202ENST00000396594 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
GNE-202ENST00000396594 A0A0A0MQY5 61 aa8.9□□□□□ -0.98
GNE-202ENST00000396594 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
GNE-202ENST00000396594 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
GNE-202ENST00000396594 CYSTM1Q9H1C7 97 aa8.87□□□□□ -0.99
GNE-202ENST00000396594 MAST4O15021 2626 aa8.86□□□□□ -0.99
GNE-202ENST00000396594 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
GNE-202ENST00000396594 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
GNE-202ENST00000396594 USP24Q9UPU5 2620 aa8.83□□□□□ -1
GNE-202ENST00000396594 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
GNE-202ENST00000396594 A8MUU9 505 aa8.82□□□□□ -1
GNE-202ENST00000396594 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
GNE-202ENST00000396594 CFAP46Q8IYW2 2715 aa8.81□□□□□ -1
GNE-202ENST00000396594 ZNF292O60281 2723 aa8.76□□□□□ -1.01
GNE-202ENST00000396594 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
GNE-202ENST00000396594 UNC79Q9P2D8 2635 aa8.67□□□□□ -1.02
GNE-202ENST00000396594 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
GNE-202ENST00000396594 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
GNE-202ENST00000396594 TRANK1O15050 2925 aa8.62□□□□□ -1.03
GNE-202ENST00000396594 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
GNE-202ENST00000396594 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
GNE-202ENST00000396594 CHD7Q9P2D1 2997 aa8.55□□□□□ -1.04
GNE-202ENST00000396594 PP632Q6XCG6 107 aa8.55□□□□□ -1.04
GNE-202ENST00000396594 A6NN06 94 aa8.53□□□□□ -1.04
GNE-202ENST00000396594 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
GNE-202ENST00000396594 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.04
GNE-202ENST00000396594 BPTFQ12830 3046 aa8.52□□□□□ -1.05
GNE-202ENST00000396594 KRTAP1-4P0C5Y4 121 aa8.52□□□□□ -1.05
GNE-202ENST00000396594 TNP1P09430 55 aa8.51□□□□□ -1.05
GNE-202ENST00000396594 IGSF10Q6WRI0 2623 aa8.49□□□□□ -1.05
GNE-202ENST00000396594 NSD1Q96L73 2696 aaPredicted RBP8.47□□□□□ -1.05
GNE-202ENST00000396594 PRRC2CQ9Y520 2896 aaKnown RBP8.45□□□□□ -1.06
GNE-202ENST00000396594 COL6A5A8TX70 2615 aa8.43□□□□□ -1.06
GNE-202ENST00000396594 XP32Q5T750 250 aa8.43□□□□□ -1.06
GNE-202ENST00000396594 BAHCC1Q9P281 2608 aa8.42□□□□□ -1.06
GNE-202ENST00000396594 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
GNE-202ENST00000396594 SRCAPQ6ZRS2 3230 aa8.37□□□□□ -1.07
GNE-202ENST00000396594 TEX15Q9BXT5 2789 aa8.37□□□□□ -1.07
GNE-202ENST00000396594 SETXQ7Z333 2677 aaKnown RBP8.35□□□□□ -1.07
GNE-202ENST00000396594 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
GNE-202ENST00000396594 A8MU10 97 aa8.29□□□□□ -1.08
GNE-202ENST00000396594 DNAH12Q6ZR08 3092 aa8.29□□□□□ -1.08
GNE-202ENST00000396594 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
GNE-202ENST00000396594 CENPEQ02224 2701 aa8.28□□□□□ -1.08
GNE-202ENST00000396594 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
GNE-202ENST00000396594 CHD6Q8TD26 2715 aa8.26□□□□□ -1.09
GNE-202ENST00000396594 AKAP13Q12802 2813 aa8.26□□□□□ -1.09
GNE-202ENST00000396594 DMBT1Q9UGM3 2413 aaPredicted RBP8.26□□□□□ -1.09
GNE-202ENST00000396594 H3BS24 57 aa8.26□□□□□ -1.09
GNE-202ENST00000396594 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
GNE-202ENST00000396594 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
GNE-202ENST00000396594 PRO2289Q9P1D8 64 aa8.23□□□□□ -1.09
GNE-202ENST00000396594 A0A1B0GVY2 172 aa8.21□□□□□ -1.1
GNE-202ENST00000396594 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
GNE-202ENST00000396594 NOTCH1P46531 2555 aa8.17□□□□□ -1.1
GNE-202ENST00000396594 HTTP42858 3142 aa8.16□□□□□ -1.1
GNE-202ENST00000396594 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
GNE-202ENST00000396594 MGAQ8IWI9 3026 aa8.09□□□□□ -1.11
GNE-202ENST00000396594 H0YAA0 97 aa8.04□□□□□ -1.12
GNE-202ENST00000396594 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
GNE-202ENST00000396594 UBR5O95071 2799 aaPredicted RBP7.99□□□□□ -1.13
GNE-202ENST00000396594 HIVEP1P15822 2718 aa7.99□□□□□ -1.13
GNE-202ENST00000396594 C5orf42Q9H799 3197 aa7.98□□□□□ -1.13
GNE-202ENST00000396594 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
GNE-202ENST00000396594 ITPR1Q14643 2758 aa7.92□□□□□ -1.14
GNE-202ENST00000396594 P0C880 135 aa7.91□□□□□ -1.14
GNE-202ENST00000396594 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
GNE-202ENST00000396594 NBEAL2Q6ZNJ1 2754 aa7.91□□□□□ -1.14
GNE-202ENST00000396594 GOLGB1Q14789 3259 aaKnown RBP7.91□□□□□ -1.14
GNE-202ENST00000396594 DSPP15924 2871 aaKnown RBP7.9□□□□□ -1.15
GNE-202ENST00000396594 NIPBLQ6KC79 2804 aaeCLIP7.87□□□□□ -1.15
GNE-202ENST00000396594 NDUFAF8A1L188 74 aa7.84□□□□□ -1.16
GNE-202ENST00000396594 CEP350Q5VT06 3117 aa7.84□□□□□ -1.16
GNE-202ENST00000396594 APCP25054 2843 aa7.83□□□□□ -1.16
GNE-202ENST00000396594 UTP20O75691 2785 aaKnown RBP7.8□□□□□ -1.16
GNE-202ENST00000396594 FLNCQ14315 2725 aa7.76□□□□□ -1.17
GNE-202ENST00000396594 KRTAP13-4Q3LI77 160 aa7.69□□□□□ -1.18
GNE-202ENST00000396594 TENM4Q6N022 2769 aa7.67□□□□□ -1.18
GNE-202ENST00000396594 LAMA1P25391 3075 aa7.66□□□□□ -1.18
GNE-202ENST00000396594 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
GNE-202ENST00000396594 LRBAP50851 2863 aa7.57□□□□□ -1.2
GNE-202ENST00000396594 FRYQ5TBA9 3013 aa7.48□□□□□ -1.21
GNE-202ENST00000396594 WDFY4Q6ZS81 3184 aa7.48□□□□□ -1.21
GNE-202ENST00000396594 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms