RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
LDHC-202ENST00000396215 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
LDHC-202ENST00000396215 GAGE2AQ6NT46 116 aa5.06□□□□□ -1.6
LDHC-202ENST00000396215 Q8N8P6 123 aa5.06□□□□□ -1.6
LDHC-202ENST00000396215 PRELID3AQ96N28 172 aa5.06□□□□□ -1.6
LDHC-202ENST00000396215 TIMM17AQ99595 171 aa5.06□□□□□ -1.6
LDHC-202ENST00000396215 H3BMG7 143 aa5.05□□□□□ -1.6
LDHC-202ENST00000396215 IGLV6-57P01721 117 aa5.05□□□□□ -1.6
LDHC-202ENST00000396215 LOC389332A0A1B0GUA5 103 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 C9JQL5 133 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 UQCRQO14949 82 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 TMEM258P61165 79 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 KCNQ1DNQ9H478 68 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
LDHC-202ENST00000396215 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
LDHC-202ENST00000396215 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
LDHC-202ENST00000396215 SPCS1Q9Y6A9 102 aa5.03□□□□□ -1.6
LDHC-202ENST00000396215 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
LDHC-202ENST00000396215 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
LDHC-202ENST00000396215 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
LDHC-202ENST00000396215 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
LDHC-202ENST00000396215 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
LDHC-202ENST00000396215 ETDCA0A1B0GVM5 59 aa5.01□□□□□ -1.61
LDHC-202ENST00000396215 ERC2-IT1O76042 136 aa5.01□□□□□ -1.61
LDHC-202ENST00000396215 MT2AP02795 61 aa5.01□□□□□ -1.61
LDHC-202ENST00000396215 RPL23P62829 140 aaKnown RBP5.01□□□□□ -1.61
LDHC-202ENST00000396215 TOMM6Q96B49 74 aa5.01□□□□□ -1.61
LDHC-202ENST00000396215 SNCGO76070 127 aa5□□□□□ -1.61
LDHC-202ENST00000396215 SRP19P09132 144 aaKnown RBP5□□□□□ -1.61
LDHC-202ENST00000396215 ATP5L2Q7Z4Y8 100 aa5□□□□□ -1.61
LDHC-202ENST00000396215 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
LDHC-202ENST00000396215 Q5XG85 94 aa4.99□□□□□ -1.61
LDHC-202ENST00000396215 PPDPFLQ8WWR9 84 aa4.99□□□□□ -1.61
LDHC-202ENST00000396215 MT-ATP8P03928 68 aa4.98□□□□□ -1.61
LDHC-202ENST00000396215 C9orf153Q5TBE3 101 aa4.98□□□□□ -1.61
LDHC-202ENST00000396215 SFTA2Q6UW10 78 aa4.98□□□□□ -1.61
LDHC-202ENST00000396215 Q9BRP9 147 aa4.98□□□□□ -1.61
LDHC-202ENST00000396215 NXT2Q9NPJ8 142 aaKnown RBP4.98□□□□□ -1.61
LDHC-202ENST00000396215 SYS1-DBNDD2H3BUS1 97 aa4.97□□□□□ -1.61
LDHC-202ENST00000396215 MT1FP04733 61 aa4.96□□□□□ -1.62
LDHC-202ENST00000396215 LINC01545Q5VT33 79 aa4.96□□□□□ -1.62
LDHC-202ENST00000396215 SCGB3A1Q96QR1 104 aa4.96□□□□□ -1.62
LDHC-202ENST00000396215 TRAPPC1Q9Y5R8 145 aa4.96□□□□□ -1.62
LDHC-202ENST00000396215 FAM236DA0A1B0GTK5 79 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 J3QQQ9 107 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 FAM236CP0DP71 79 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 NMUP48645 174 aa4.95□□□□□ -1.62
LDHC-202ENST00000396215 ZNF625Q96I27 306 aaPredicted RBP4.95□□□□□ -1.62
LDHC-202ENST00000396215 TRBV10-3A0A0K0K1G6 114 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 TRACP01848 142 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 KIAA1644Q3SXP7 199 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 LYRM7Q5U5X0 104 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 Q6ZRX8 168 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 Q6ZVH6 145 aa4.94□□□□□ -1.62
LDHC-202ENST00000396215 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
LDHC-202ENST00000396215 E9PLD3 99 aa4.93□□□□□ -1.62
LDHC-202ENST00000396215 H3BUT2 72 aa4.93□□□□□ -1.62
LDHC-202ENST00000396215 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
LDHC-202ENST00000396215 COX8AP10176 69 aa4.92□□□□□ -1.62
LDHC-202ENST00000396215 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
LDHC-202ENST00000396215 LINC00158P58513 81 aa4.92□□□□□ -1.62
LDHC-202ENST00000396215 KRTDAPP60985 99 aa4.92□□□□□ -1.62
LDHC-202ENST00000396215 ANKRD29Q8N6D5 301 aa4.92□□□□□ -1.62
LDHC-202ENST00000396215 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 FAM240AA0A1B0GVK7 77 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 A0A1B0GWB2 263 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 NCR3O14931 201 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 C3orf79P0CE67 100 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 COX7CP15954 63 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 ETDBQ3ZM63 59 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 TEN1Q86WV5 123 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 BAGE3Q86Y29 109 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 HIGD1BQ9P298 99 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
LDHC-202ENST00000396215 TRBV7-6A0A0J9YX20 115 aa4.9□□□□□ -1.63
LDHC-202ENST00000396215 LINC01546A6NGU7 62 aa4.9□□□□□ -1.63
LDHC-202ENST00000396215 SPRR1BP22528 89 aa4.9□□□□□ -1.63
LDHC-202ENST00000396215 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.63
LDHC-202ENST00000396215 NAA38Q9BRA0 125 aaKnown RBP4.9□□□□□ -1.63
LDHC-202ENST00000396215 TRBV20-1A0A075B6N2 111 aa4.89□□□□□ -1.63
LDHC-202ENST00000396215 ACYP1P07311 99 aa4.89□□□□□ -1.63
LDHC-202ENST00000396215 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
LDHC-202ENST00000396215 SERF1AO75920 110 aa4.88□□□□□ -1.63
LDHC-202ENST00000396215 ST20-AS1Q8NBB2 130 aa4.88□□□□□ -1.63
LDHC-202ENST00000396215 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
LDHC-202ENST00000396215 TRBV10-2A0A0K0K1G8 114 aa4.87□□□□□ -1.63
LDHC-202ENST00000396215 LOC107984156A0A0G2JMH3 177 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 ATOX1O00244 68 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 ATP11AUNQ6ZP68 121 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 Q75L30 129 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 ARL17AQ8IVW1 177 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 MIR7-3HGQ8N6C7 128 aa4.86□□□□□ -1.63
LDHC-202ENST00000396215 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms