RNA–Protein interactions for RNA: ENST00000396184.7

PDE1C-203, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 8,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-203ENST00000396184 CENPEQ02224 2701 aa4.18□□□□□ -1.74
PDE1C-203ENST00000396184 J3QL48 77 aa4.18□□□□□ -1.74
PDE1C-203ENST00000396184 R4GN34 69 aa4.18□□□□□ -1.74
PDE1C-203ENST00000396184 CHD6Q8TD26 2715 aa4.18□□□□□ -1.74
PDE1C-203ENST00000396184 TNP2Q05952 138 aa4.17□□□□□ -1.74
PDE1C-203ENST00000396184 Q6ZSA8 131 aa4.17□□□□□ -1.74
PDE1C-203ENST00000396184 MAST4O15021 2626 aa4.17□□□□□ -1.74
PDE1C-203ENST00000396184 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
PDE1C-203ENST00000396184 SPRR1AP35321 89 aa4.16□□□□□ -1.74
PDE1C-203ENST00000396184 Q6ZR54 194 aa4.16□□□□□ -1.74
PDE1C-203ENST00000396184 KRTAP24-1Q3LI83 254 aa4.16□□□□□ -1.74
PDE1C-203ENST00000396184 NOTCH1P46531 2555 aa4.16□□□□□ -1.74
PDE1C-203ENST00000396184 K7EIL1 84 aa4.15□□□□□ -1.74
PDE1C-203ENST00000396184 CEP350Q5VT06 3117 aa4.15□□□□□ -1.74
PDE1C-203ENST00000396184 ITPR3Q14573 2671 aa4.15□□□□□ -1.74
PDE1C-203ENST00000396184 STAB2Q8WWQ8 2551 aa4.15□□□□□ -1.75
PDE1C-203ENST00000396184 KRTAP26-1Q6PEX3 210 aa4.14□□□□□ -1.75
PDE1C-203ENST00000396184 GCN1Q92616 2671 aaKnown RBP4.14□□□□□ -1.75
PDE1C-203ENST00000396184 CFAP54Q96N23 3096 aa4.13□□□□□ -1.75
PDE1C-203ENST00000396184 DNAH12Q6ZR08 3092 aa4.13□□□□□ -1.75
PDE1C-203ENST00000396184 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
PDE1C-203ENST00000396184 PCNTO95613 3336 aa4.13□□□□□ -1.75
PDE1C-203ENST00000396184 UNC79Q9P2D8 2635 aa4.12□□□□□ -1.75
PDE1C-203ENST00000396184 FLNAP21333 2647 aaKnown RBP4.12□□□□□ -1.75
PDE1C-203ENST00000396184 GOLGB1Q14789 3259 aaKnown RBP4.12□□□□□ -1.75
PDE1C-203ENST00000396184 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
PDE1C-203ENST00000396184 M0QZ58 72 aa4.1□□□□□ -1.75
PDE1C-203ENST00000396184 SPRR1BP22528 89 aa4.1□□□□□ -1.75
PDE1C-203ENST00000396184 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
PDE1C-203ENST00000396184 HELZ2Q9BYK8 2649 aaKnown RBP4.1□□□□□ -1.75
PDE1C-203ENST00000396184 TRANK1O15050 2925 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 A8MUU9 505 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 ZNF292O60281 2723 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 STAB1Q9NY15 2570 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 PANO1I0J062 215 aa4.09□□□□□ -1.75
PDE1C-203ENST00000396184 C20orf166-AS1Q96NR2 134 aa4.09□□□□□ -1.76
PDE1C-203ENST00000396184 CFAP46Q8IYW2 2715 aa4.08□□□□□ -1.76
PDE1C-203ENST00000396184 A0A087X002 238 aa4.07□□□□□ -1.76
PDE1C-203ENST00000396184 LCE6AA0A183 80 aa4.06□□□□□ -1.76
PDE1C-203ENST00000396184 UTRNP46939 3433 aa4.06□□□□□ -1.76
PDE1C-203ENST00000396184 COL6A5A8TX70 2615 aa4.06□□□□□ -1.76
PDE1C-203ENST00000396184 M0R2T5 61 aa4.05□□□□□ -1.76
PDE1C-203ENST00000396184 LAMA2P24043 3122 aaKnown RBP4.05□□□□□ -1.76
PDE1C-203ENST00000396184 FLNBO75369 2602 aaKnown RBP4.03□□□□□ -1.76
PDE1C-203ENST00000396184 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
PDE1C-203ENST00000396184 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
PDE1C-203ENST00000396184 FREM2Q5SZK8 3169 aa4.02□□□□□ -1.77
PDE1C-203ENST00000396184 C5orf42Q9H799 3197 aa4.01□□□□□ -1.77
PDE1C-203ENST00000396184 NBEAL2Q6ZNJ1 2754 aa4.01□□□□□ -1.77
PDE1C-203ENST00000396184 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
PDE1C-203ENST00000396184 NOTCH2NLQ7Z3S9 236 aa3.99□□□□□ -1.77
PDE1C-203ENST00000396184 TEX15Q9BXT5 2789 aa3.99□□□□□ -1.77
PDE1C-203ENST00000396184 C10orf95Q9H7T3 257 aa3.98□□□□□ -1.77
PDE1C-203ENST00000396184 MAP1AP78559 2803 aaPredicted RBP3.98□□□□□ -1.77
PDE1C-203ENST00000396184 ITPR1Q14643 2758 aa3.98□□□□□ -1.77
PDE1C-203ENST00000396184 BAHCC1Q9P281 2608 aa3.98□□□□□ -1.77
PDE1C-203ENST00000396184 NSD1Q96L73 2696 aaPredicted RBP3.97□□□□□ -1.77
PDE1C-203ENST00000396184 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
PDE1C-203ENST00000396184 DSPP15924 2871 aaKnown RBP3.94□□□□□ -1.78
PDE1C-203ENST00000396184 APCP25054 2843 aa3.92□□□□□ -1.78
PDE1C-203ENST00000396184 UTP20O75691 2785 aaKnown RBP3.91□□□□□ -1.78
PDE1C-203ENST00000396184 KRTAP1-5Q9BYS1 174 aa3.91□□□□□ -1.78
PDE1C-203ENST00000396184 LRBAP50851 2863 aa3.9□□□□□ -1.79
PDE1C-203ENST00000396184 UBR5O95071 2799 aaPredicted RBP3.89□□□□□ -1.79
PDE1C-203ENST00000396184 FLNCQ14315 2725 aa3.89□□□□□ -1.79
PDE1C-203ENST00000396184 MGAQ8IWI9 3026 aa3.88□□□□□ -1.79
PDE1C-203ENST00000396184 KRTAP1-3Q8IUG1 177 aa3.87□□□□□ -1.79
PDE1C-203ENST00000396184 FRYQ5TBA9 3013 aa3.87□□□□□ -1.79
PDE1C-203ENST00000396184 IGSF10Q6WRI0 2623 aa3.86□□□□□ -1.79
PDE1C-203ENST00000396184 KRTAP1-1Q07627 177 aa3.86□□□□□ -1.79
PDE1C-203ENST00000396184 P0C880 135 aa3.86□□□□□ -1.79
PDE1C-203ENST00000396184 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
PDE1C-203ENST00000396184 KALRNO60229 2985 aa3.85□□□□□ -1.79
PDE1C-203ENST00000396184 TRIOO75962 3097 aa3.84□□□□□ -1.79
PDE1C-203ENST00000396184 TNP1P09430 55 aa3.84□□□□□ -1.8
PDE1C-203ENST00000396184 PRUNE2Q8WUY3 3088 aa3.83□□□□□ -1.8
PDE1C-203ENST00000396184 H0YAA0 97 aa3.83□□□□□ -1.8
PDE1C-203ENST00000396184 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
PDE1C-203ENST00000396184 RANBP2P49792 3224 aaKnown RBP3.82□□□□□ -1.8
PDE1C-203ENST00000396184 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
PDE1C-203ENST00000396184 SETXQ7Z333 2677 aaKnown RBP3.81□□□□□ -1.8
PDE1C-203ENST00000396184 KRTAP10-1P60331 282 aa3.81□□□□□ -1.8
PDE1C-203ENST00000396184 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
PDE1C-203ENST00000396184 NBEAQ8NFP9 2946 aa3.79□□□□□ -1.8
PDE1C-203ENST00000396184 CHD9Q3L8U1 2897 aa3.78□□□□□ -1.8
PDE1C-203ENST00000396184 CHD7Q9P2D1 2997 aa3.78□□□□□ -1.8
PDE1C-203ENST00000396184 Q5VSD8 79 aa3.77□□□□□ -1.81
PDE1C-203ENST00000396184 KRTAP7-1Q8IUC3 87 aa3.77□□□□□ -1.81
PDE1C-203ENST00000396184 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
PDE1C-203ENST00000396184 REV3LO60673 3130 aa3.76□□□□□ -1.81
PDE1C-203ENST00000396184 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
PDE1C-203ENST00000396184 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
PDE1C-203ENST00000396184 DMXL2Q8TDJ6 3036 aa3.74□□□□□ -1.81
PDE1C-203ENST00000396184 FRYLO94915 3013 aa3.74□□□□□ -1.81
PDE1C-203ENST00000396184 UNC80Q8N2C7 3258 aa3.74□□□□□ -1.81
PDE1C-203ENST00000396184 CELSR3Q9NYQ7 3312 aa3.73□□□□□ -1.81
PDE1C-203ENST00000396184 KMT2BQ9UMN6 2715 aaPredicted RBP3.73□□□□□ -1.81
PDE1C-203ENST00000396184 WDFY4Q6ZS81 3184 aa3.72□□□□□ -1.81
PDE1C-203ENST00000396184 KRTAP13-1Q8IUC0 172 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms