RNA–Protein interactions for RNA: ENST00000395388.6

HLA-DRA-202, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DRA, Length 1,280 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-202ENST00000395388 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
HLA-DRA-202ENST00000395388 H3BQ85 93 aa7.41□□□□□ -1.22
HLA-DRA-202ENST00000395388 TAX1BP3O14907 124 aa7.41□□□□□ -1.22
HLA-DRA-202ENST00000395388 C9orf153Q5TBE3 101 aa7.41□□□□□ -1.22
HLA-DRA-202ENST00000395388 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 F8WEM9 126 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 LINC01547P58512 204 aaPredicted RBP7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 ATXN8Q156A1 80 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 SSBP3-AS1Q7Z2R9 100 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 Q8N377 158 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 C3orf22Q8N5N4 141 aa7.4□□□□□ -1.22
HLA-DRA-202ENST00000395388 LST1O00453 97 aa7.39□□□□□ -1.23
HLA-DRA-202ENST00000395388 TRACP01848 142 aa7.39□□□□□ -1.23
HLA-DRA-202ENST00000395388 MT1HL1P0DM35 61 aa7.39□□□□□ -1.23
HLA-DRA-202ENST00000395388 ORMDL1Q9P0S3 153 aa7.39□□□□□ -1.23
HLA-DRA-202ENST00000395388 ABCA13Q86UQ4 5058 aa7.38□□□□□ -1.23
HLA-DRA-202ENST00000395388 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
HLA-DRA-202ENST00000395388 FABP2P12104 132 aa7.38□□□□□ -1.23
HLA-DRA-202ENST00000395388 MOBPQ13875 183 aa7.38□□□□□ -1.23
HLA-DRA-202ENST00000395388 Q8NBF4 154 aa7.37□□□□□ -1.23
HLA-DRA-202ENST00000395388 A0A1W2PPM0 123 aa7.36□□□□□ -1.23
HLA-DRA-202ENST00000395388 TMEM256-PLSCR3K7ERE1 68 aa7.36□□□□□ -1.23
HLA-DRA-202ENST00000395388 TCL1BO95988 128 aa7.36□□□□□ -1.23
HLA-DRA-202ENST00000395388 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
HLA-DRA-202ENST00000395388 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
HLA-DRA-202ENST00000395388 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
HLA-DRA-202ENST00000395388 NDUFV3P56181 108 aaKnown RBP7.33□□□□□ -1.24
HLA-DRA-202ENST00000395388 H3BS24 57 aa7.32□□□□□ -1.24
HLA-DRA-202ENST00000395388 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
HLA-DRA-202ENST00000395388 Q6JHZ5 121 aa7.31□□□□□ -1.24
HLA-DRA-202ENST00000395388 H3BMG7 143 aa7.3□□□□□ -1.24
HLA-DRA-202ENST00000395388 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
HLA-DRA-202ENST00000395388 SPCS1Q9Y6A9 102 aa7.3□□□□□ -1.24
HLA-DRA-202ENST00000395388 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
HLA-DRA-202ENST00000395388 LRP1Q07954 4544 aaKnown RBP7.29□□□□□ -1.24
HLA-DRA-202ENST00000395388 SPINK1P00995 79 aa7.29□□□□□ -1.24
HLA-DRA-202ENST00000395388 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
HLA-DRA-202ENST00000395388 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
HLA-DRA-202ENST00000395388 C9JAW5 83 aa7.28□□□□□ -1.24
HLA-DRA-202ENST00000395388 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
HLA-DRA-202ENST00000395388 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
HLA-DRA-202ENST00000395388 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
HLA-DRA-202ENST00000395388 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
HLA-DRA-202ENST00000395388 CD164Q04900 197 aa7.26□□□□□ -1.25
HLA-DRA-202ENST00000395388 GTF2H5Q6ZYL4 71 aa7.25□□□□□ -1.25
HLA-DRA-202ENST00000395388 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
HLA-DRA-202ENST00000395388 RBM3P98179 157 aaKnown RBP7.24□□□□□ -1.25
HLA-DRA-202ENST00000395388 IGFL1Q6UW32 110 aa7.24□□□□□ -1.25
HLA-DRA-202ENST00000395388 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 A0A1B0GV72 72 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 K7EP34 96 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 DSCR8Q96T75 97 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 LIMD2Q9BT23 127 aa7.23□□□□□ -1.25
HLA-DRA-202ENST00000395388 H3BT86 120 aa7.22□□□□□ -1.25
HLA-DRA-202ENST00000395388 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
HLA-DRA-202ENST00000395388 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
HLA-DRA-202ENST00000395388 TNXBP22105 4242 aa7.18□□□□□ -1.26
HLA-DRA-202ENST00000395388 TRBV7-7A0A0K0K1E9 115 aa7.17□□□□□ -1.26
HLA-DRA-202ENST00000395388 PRR4Q16378 134 aa7.17□□□□□ -1.26
HLA-DRA-202ENST00000395388 Q6Q795 121 aa7.17□□□□□ -1.26
HLA-DRA-202ENST00000395388 CCKP06307 115 aa7.16□□□□□ -1.26
HLA-DRA-202ENST00000395388 PDE6GP18545 87 aa7.16□□□□□ -1.26
HLA-DRA-202ENST00000395388 VPS25Q9BRG1 176 aa7.16□□□□□ -1.26
HLA-DRA-202ENST00000395388 TRBV7-4A0A0J9YYF1 115 aa7.15□□□□□ -1.26
HLA-DRA-202ENST00000395388 Q5XG85 94 aa7.15□□□□□ -1.26
HLA-DRA-202ENST00000395388 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.26
HLA-DRA-202ENST00000395388 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
HLA-DRA-202ENST00000395388 A0A1W2PNM2 257 aa7.14□□□□□ -1.27
HLA-DRA-202ENST00000395388 F8W1H4 67 aa7.14□□□□□ -1.27
HLA-DRA-202ENST00000395388 C21orf62-AS1Q17RA5 79 aa7.14□□□□□ -1.27
HLA-DRA-202ENST00000395388 A0A087WSZ3 146 aa7.12□□□□□ -1.27
HLA-DRA-202ENST00000395388 LOC110117498A0A087WWA1 95 aa7.12□□□□□ -1.27
HLA-DRA-202ENST00000395388 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
HLA-DRA-202ENST00000395388 OBSCN-AS1Q96MR7 158 aa7.12□□□□□ -1.27
HLA-DRA-202ENST00000395388 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
HLA-DRA-202ENST00000395388 PRO0461Q9UI25 63 aa7.11□□□□□ -1.27
HLA-DRA-202ENST00000395388 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
HLA-DRA-202ENST00000395388 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
HLA-DRA-202ENST00000395388 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
HLA-DRA-202ENST00000395388 Q6ZQT0 140 aa7.1□□□□□ -1.27
HLA-DRA-202ENST00000395388 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
HLA-DRA-202ENST00000395388 A0A1B0GV90 55 aa7.09□□□□□ -1.27
HLA-DRA-202ENST00000395388 A0A1B0GW54 56 aa7.09□□□□□ -1.27
HLA-DRA-202ENST00000395388 C1orf195Q5TG92 126 aa7.07□□□□□ -1.28
HLA-DRA-202ENST00000395388 ETDBQ3ZM63 59 aa7.04□□□□□ -1.28
HLA-DRA-202ENST00000395388 CDIP1Q9H305 208 aa7.04□□□□□ -1.28
HLA-DRA-202ENST00000395388 NREPQ16612 68 aa7□□□□□ -1.29
HLA-DRA-202ENST00000395388 TPRXLQ17RH7 258 aa7□□□□□ -1.29
HLA-DRA-202ENST00000395388 HERC1Q15751 4861 aa6.99□□□□□ -1.29
HLA-DRA-202ENST00000395388 IGKV4-1P06312 121 aa6.99□□□□□ -1.29
HLA-DRA-202ENST00000395388 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
HLA-DRA-202ENST00000395388 J3KT08 172 aa6.97□□□□□ -1.29
HLA-DRA-202ENST00000395388 Q96NJ1 140 aa6.97□□□□□ -1.29
HLA-DRA-202ENST00000395388 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
HLA-DRA-202ENST00000395388 DEFB116Q30KQ4 102 aa6.96□□□□□ -1.3
HLA-DRA-202ENST00000395388 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
HLA-DRA-202ENST00000395388 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
HLA-DRA-202ENST00000395388 NDUFB1O75438 58 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms