RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 LCE6AA0A183 80 aa8.64□□□□□ -1.03
CDC42SE2-202ENST00000395246 Q6ZVQ6 151 aa8.64□□□□□ -1.03
CDC42SE2-202ENST00000395246 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
CDC42SE2-202ENST00000395246 LY6G6CO95867 125 aa8.62□□□□□ -1.03
CDC42SE2-202ENST00000395246 FAM19A1Q7Z5A9 133 aa8.62□□□□□ -1.03
CDC42SE2-202ENST00000395246 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
CDC42SE2-202ENST00000395246 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
CDC42SE2-202ENST00000395246 ZNF861PO60384 105 aa8.6□□□□□ -1.03
CDC42SE2-202ENST00000395246 LRP1BQ9NZR2 4599 aa8.59□□□□□ -1.03
CDC42SE2-202ENST00000395246 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
CDC42SE2-202ENST00000395246 UBE2BP63146 152 aa8.59□□□□□ -1.03
CDC42SE2-202ENST00000395246 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
CDC42SE2-202ENST00000395246 ZNF706Q9Y5V0 76 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-202ENST00000395246 PRLHP81277 87 aa8.59□□□□□ -1.04
CDC42SE2-202ENST00000395246 IGFL1Q6UW32 110 aa8.59□□□□□ -1.04
CDC42SE2-202ENST00000395246 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
CDC42SE2-202ENST00000395246 IGLV7-43P04211 117 aa8.55□□□□□ -1.04
CDC42SE2-202ENST00000395246 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
CDC42SE2-202ENST00000395246 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
CDC42SE2-202ENST00000395246 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
CDC42SE2-202ENST00000395246 VPS13BQ7Z7G8 4022 aa8.52□□□□□ -1.04
CDC42SE2-202ENST00000395246 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDC42SE2-202ENST00000395246 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
CDC42SE2-202ENST00000395246 CD164Q04900 197 aa8.52□□□□□ -1.05
CDC42SE2-202ENST00000395246 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
CDC42SE2-202ENST00000395246 Q5XG85 94 aa8.51□□□□□ -1.05
CDC42SE2-202ENST00000395246 UBE2AP49459 152 aa8.51□□□□□ -1.05
CDC42SE2-202ENST00000395246 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
CDC42SE2-202ENST00000395246 ATOX1O00244 68 aa8.5□□□□□ -1.05
CDC42SE2-202ENST00000395246 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
CDC42SE2-202ENST00000395246 A0A1B0GV72 72 aa8.49□□□□□ -1.05
CDC42SE2-202ENST00000395246 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
CDC42SE2-202ENST00000395246 LINC00472Q9H8W2 130 aa8.48□□□□□ -1.05
CDC42SE2-202ENST00000395246 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
CDC42SE2-202ENST00000395246 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-202ENST00000395246 F8WEM9 126 aa8.47□□□□□ -1.05
CDC42SE2-202ENST00000395246 Q96NJ1 140 aa8.46□□□□□ -1.05
CDC42SE2-202ENST00000395246 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.06
CDC42SE2-202ENST00000395246 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.06
CDC42SE2-202ENST00000395246 DSCR10P59022 87 aa8.46□□□□□ -1.06
CDC42SE2-202ENST00000395246 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
CDC42SE2-202ENST00000395246 HIGD2AQ9BW72 106 aa8.46□□□□□ -1.06
CDC42SE2-202ENST00000395246 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
CDC42SE2-202ENST00000395246 NREPQ16612 68 aa8.43□□□□□ -1.06
CDC42SE2-202ENST00000395246 KRTAP1-4P0C5Y4 121 aa8.42□□□□□ -1.06
CDC42SE2-202ENST00000395246 ANAPC13Q9BS18 74 aa8.42□□□□□ -1.06
CDC42SE2-202ENST00000395246 SSBP3-AS1Q7Z2R9 100 aa8.41□□□□□ -1.06
CDC42SE2-202ENST00000395246 COX7CP15954 63 aa8.41□□□□□ -1.06
CDC42SE2-202ENST00000395246 UQCRQO14949 82 aa8.41□□□□□ -1.06
CDC42SE2-202ENST00000395246 SERP2Q8N6R1 65 aa8.39□□□□□ -1.07
CDC42SE2-202ENST00000395246 TGP01266 2768 aa8.39□□□□□ -1.07
CDC42SE2-202ENST00000395246 J3KT08 172 aa8.39□□□□□ -1.07
CDC42SE2-202ENST00000395246 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
CDC42SE2-202ENST00000395246 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
CDC42SE2-202ENST00000395246 KRTAP29-1A8MX34 341 aaPredicted RBP8.38□□□□□ -1.07
CDC42SE2-202ENST00000395246 A0A087WVE0 104 aa8.37□□□□□ -1.07
CDC42SE2-202ENST00000395246 BPY2O14599 106 aa8.37□□□□□ -1.07
CDC42SE2-202ENST00000395246 OCR1Q9BZK8 76 aa8.36□□□□□ -1.07
CDC42SE2-202ENST00000395246 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
CDC42SE2-202ENST00000395246 SPINK6Q6UWN8 80 aa8.34□□□□□ -1.07
CDC42SE2-202ENST00000395246 A8MWP4 228 aa8.33□□□□□ -1.08
CDC42SE2-202ENST00000395246 HAMPP81172 84 aa8.33□□□□□ -1.08
CDC42SE2-202ENST00000395246 MOBPQ13875 183 aa8.32□□□□□ -1.08
CDC42SE2-202ENST00000395246 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
CDC42SE2-202ENST00000395246 SS18L2Q9UHA2 77 aa8.31□□□□□ -1.08
CDC42SE2-202ENST00000395246 KLKP1Q107X0 134 aa8.31□□□□□ -1.08
CDC42SE2-202ENST00000395246 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
CDC42SE2-202ENST00000395246 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
CDC42SE2-202ENST00000395246 A0A087WSZ3 146 aa8.3□□□□□ -1.08
CDC42SE2-202ENST00000395246 DPH3Q96FX2 82 aa8.3□□□□□ -1.08
CDC42SE2-202ENST00000395246 RYR3Q15413 4870 aa8.28□□□□□ -1.08
CDC42SE2-202ENST00000395246 K7EQZ3 153 aa8.28□□□□□ -1.08
CDC42SE2-202ENST00000395246 SRRM2Q9UQ35 2752 aaKnown RBP8.28□□□□□ -1.08
CDC42SE2-202ENST00000395246 HSPG2P98160 4391 aa8.26□□□□□ -1.09
CDC42SE2-202ENST00000395246 A0A0G2JQZ4 141 aa8.26□□□□□ -1.09
CDC42SE2-202ENST00000395246 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
CDC42SE2-202ENST00000395246 TNXBP22105 4242 aa8.24□□□□□ -1.09
CDC42SE2-202ENST00000395246 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
CDC42SE2-202ENST00000395246 A0A087X002 238 aa8.24□□□□□ -1.09
CDC42SE2-202ENST00000395246 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
CDC42SE2-202ENST00000395246 CDK2AP2O75956 126 aa8.23□□□□□ -1.09
CDC42SE2-202ENST00000395246 MMP24-AS1A0A0U1RRL7 71 aa8.23□□□□□ -1.09
CDC42SE2-202ENST00000395246 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
CDC42SE2-202ENST00000395246 IGLV9-49A0A0B4J1Y8 123 aa8.19□□□□□ -1.1
CDC42SE2-202ENST00000395246 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
CDC42SE2-202ENST00000395246 Q8N9L7 120 aa8.19□□□□□ -1.1
CDC42SE2-202ENST00000395246 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
CDC42SE2-202ENST00000395246 NDUFC1O43677 76 aa8.17□□□□□ -1.1
CDC42SE2-202ENST00000395246 H3BPC8 53 aa8.16□□□□□ -1.1
CDC42SE2-202ENST00000395246 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
CDC42SE2-202ENST00000395246 ANAPC11Q9NYG5 84 aa8.15□□□□□ -1.1
CDC42SE2-202ENST00000395246 RYR1P21817 5038 aa8.15□□□□□ -1.11
CDC42SE2-202ENST00000395246 SPINK1P00995 79 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 TMEM258P61165 79 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 TMEM254Q8TBM7 123 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 FAT1Q14517 4588 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
CDC42SE2-202ENST00000395246 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
CDC42SE2-202ENST00000395246 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms