RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 KRTAP10-11P60412 298 aa10.4□□□□□ -0.74
EFEMP1-202ENST00000394555 DNAH10OSP0CZ25 163 aa10.4□□□□□ -0.74
EFEMP1-202ENST00000394555 ANK2Q01484 3957 aa10.4□□□□□ -0.75
EFEMP1-202ENST00000394555 NDUFB1O75438 58 aa10.39□□□□□ -0.75
EFEMP1-202ENST00000394555 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
EFEMP1-202ENST00000394555 B9D2Q9BPU9 175 aa10.38□□□□□ -0.75
EFEMP1-202ENST00000394555 A8MU10 97 aa10.37□□□□□ -0.75
EFEMP1-202ENST00000394555 MAST4O15021 2626 aa10.37□□□□□ -0.75
EFEMP1-202ENST00000394555 PMAIP1Q13794 54 aa10.36□□□□□ -0.75
EFEMP1-202ENST00000394555 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
EFEMP1-202ENST00000394555 H0Y9P7 68 aa10.34□□□□□ -0.75
EFEMP1-202ENST00000394555 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
EFEMP1-202ENST00000394555 CASC2Q6XLA1 102 aa10.33□□□□□ -0.76
EFEMP1-202ENST00000394555 UBE2AP49459 152 aa10.32□□□□□ -0.76
EFEMP1-202ENST00000394555 A0A096LNI7 61 aa10.31□□□□□ -0.76
EFEMP1-202ENST00000394555 FBN1P35555 2871 aaKnown RBP10.29□□□□□ -0.76
EFEMP1-202ENST00000394555 Q5VV11 94 aa10.29□□□□□ -0.76
EFEMP1-202ENST00000394555 KRTAP29-1A8MX34 341 aaPredicted RBP10.28□□□□□ -0.76
EFEMP1-202ENST00000394555 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
EFEMP1-202ENST00000394555 STAB1Q9NY15 2570 aa10.28□□□□□ -0.76
EFEMP1-202ENST00000394555 J3QKU1 62 aa10.28□□□□□ -0.76
EFEMP1-202ENST00000394555 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
EFEMP1-202ENST00000394555 COL6A5A8TX70 2615 aa10.26□□□□□ -0.77
EFEMP1-202ENST00000394555 PRR15LQ9BU68 103 aa10.26□□□□□ -0.77
EFEMP1-202ENST00000394555 H0Y9J4 135 aa10.25□□□□□ -0.77
EFEMP1-202ENST00000394555 CSMD3Q7Z407 3707 aa10.24□□□□□ -0.77
EFEMP1-202ENST00000394555 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
EFEMP1-202ENST00000394555 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
EFEMP1-202ENST00000394555 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.77
EFEMP1-202ENST00000394555 SPTSSBQ8NFR3 76 aa10.21□□□□□ -0.77
EFEMP1-202ENST00000394555 A8MWP4 228 aa10.21□□□□□ -0.78
EFEMP1-202ENST00000394555 NBEAL1Q6ZS30 2694 aa10.21□□□□□ -0.78
EFEMP1-202ENST00000394555 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
EFEMP1-202ENST00000394555 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
EFEMP1-202ENST00000394555 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
EFEMP1-202ENST00000394555 DNAH10Q8IVF4 4471 aa10.19□□□□□ -0.78
EFEMP1-202ENST00000394555 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
EFEMP1-202ENST00000394555 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
EFEMP1-202ENST00000394555 PCOTHQ58A44 107 aa10.18□□□□□ -0.78
EFEMP1-202ENST00000394555 KMT2BQ9UMN6 2715 aaPredicted RBP10.18□□□□□ -0.78
EFEMP1-202ENST00000394555 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
EFEMP1-202ENST00000394555 DNAH1Q9P2D7 4330 aa10.17□□□□□ -0.78
EFEMP1-202ENST00000394555 H3BPC8 53 aa10.17□□□□□ -0.78
EFEMP1-202ENST00000394555 COA5Q86WW8 74 aa10.16□□□□□ -0.78
EFEMP1-202ENST00000394555 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
EFEMP1-202ENST00000394555 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
EFEMP1-202ENST00000394555 A6NED7 52 aa10.14□□□□□ -0.79
EFEMP1-202ENST00000394555 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
EFEMP1-202ENST00000394555 LYSTQ99698 3801 aa10.11□□□□□ -0.79
EFEMP1-202ENST00000394555 MMP24-AS1A0A0U1RRL7 71 aa10.11□□□□□ -0.79
EFEMP1-202ENST00000394555 LCA10Q71F78 164 aa10.1□□□□□ -0.79
EFEMP1-202ENST00000394555 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
EFEMP1-202ENST00000394555 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
EFEMP1-202ENST00000394555 IGLV7-46A0A075B6I9 117 aa10.08□□□□□ -0.8
EFEMP1-202ENST00000394555 NDUFS5O43920 106 aa10.07□□□□□ -0.8
EFEMP1-202ENST00000394555 IGLV9-49A0A0B4J1Y8 123 aa10.07□□□□□ -0.8
EFEMP1-202ENST00000394555 SPRR1BP22528 89 aa10.06□□□□□ -0.8
EFEMP1-202ENST00000394555 CD164Q04900 197 aa10.06□□□□□ -0.8
EFEMP1-202ENST00000394555 Q75L30 129 aa10.05□□□□□ -0.8
EFEMP1-202ENST00000394555 CMYA5Q8N3K9 4069 aa10.03□□□□□ -0.8
EFEMP1-202ENST00000394555 LOC101927531A0A1B0GV80 90 aa10.01□□□□□ -0.81
EFEMP1-202ENST00000394555 STAB2Q8WWQ8 2551 aa10.01□□□□□ -0.81
EFEMP1-202ENST00000394555 IGHV6-1A0A0B4J1U7 121 aa10.01□□□□□ -0.81
EFEMP1-202ENST00000394555 DNAH9Q9NYC9 4486 aa10□□□□□ -0.81
EFEMP1-202ENST00000394555 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
EFEMP1-202ENST00000394555 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
EFEMP1-202ENST00000394555 KRTAP24-1Q3LI83 254 aa10□□□□□ -0.81
EFEMP1-202ENST00000394555 UBE2DNLQ8IWF7 75 aa10□□□□□ -0.81
EFEMP1-202ENST00000394555 PANO1I0J062 215 aa9.97□□□□□ -0.81
EFEMP1-202ENST00000394555 Q96NJ1 140 aa9.97□□□□□ -0.81
EFEMP1-202ENST00000394555 C8orf17Q9NRJ1 99 aa9.97□□□□□ -0.81
EFEMP1-202ENST00000394555 HUWE1Q7Z6Z7 4374 aaKnown RBP9.96□□□□□ -0.81
EFEMP1-202ENST00000394555 TP53AIP1Q9HCN2 124 aa9.96□□□□□ -0.82
EFEMP1-202ENST00000394555 CDC42SE1Q9NRR8 79 aa9.94□□□□□ -0.82
EFEMP1-202ENST00000394555 MOBPQ13875 183 aa9.94□□□□□ -0.82
EFEMP1-202ENST00000394555 HRES1P13985 223 aa9.93□□□□□ -0.82
EFEMP1-202ENST00000394555 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
EFEMP1-202ENST00000394555 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
EFEMP1-202ENST00000394555 CDK2AP2O75956 126 aa9.92□□□□□ -0.82
EFEMP1-202ENST00000394555 C14orf177Q52M58 125 aa9.92□□□□□ -0.82
EFEMP1-202ENST00000394555 A6NN06 94 aa9.91□□□□□ -0.82
EFEMP1-202ENST00000394555 SPINK7P58062 85 aa9.91□□□□□ -0.82
EFEMP1-202ENST00000394555 MGAM2Q2M2H8 2515 aa9.91□□□□□ -0.82
EFEMP1-202ENST00000394555 Q6ZR54 194 aa9.9□□□□□ -0.82
EFEMP1-202ENST00000394555 A0A087X002 238 aa9.9□□□□□ -0.83
EFEMP1-202ENST00000394555 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.83
EFEMP1-202ENST00000394555 NOTCH2NLQ7Z3S9 236 aa9.9□□□□□ -0.83
EFEMP1-202ENST00000394555 DNAH3Q8TD57 4116 aa9.9□□□□□ -0.83
EFEMP1-202ENST00000394555 K7EIL1 84 aa9.89□□□□□ -0.83
EFEMP1-202ENST00000394555 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
EFEMP1-202ENST00000394555 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
EFEMP1-202ENST00000394555 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
EFEMP1-202ENST00000394555 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
EFEMP1-202ENST00000394555 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
EFEMP1-202ENST00000394555 PLAC8Q9NZF1 115 aa9.85□□□□□ -0.83
EFEMP1-202ENST00000394555 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
EFEMP1-202ENST00000394555 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.83□□□□□ -0.84
EFEMP1-202ENST00000394555 DNAH7Q8WXX0 4024 aa9.82□□□□□ -0.84
EFEMP1-202ENST00000394555 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
EFEMP1-202ENST00000394555 Q5W150 140 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms