RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 SMIM29Q86T20 159 aa9.23□□□□□ -0.93
CCT4-201ENST00000394440 PKD1P98161 4303 aa9.23□□□□□ -0.93
CCT4-201ENST00000394440 CCDC179H3BU77 68 aa9.23□□□□□ -0.93
CCT4-201ENST00000394440 UBE2AP49459 152 aa9.22□□□□□ -0.93
CCT4-201ENST00000394440 TRBV7-7A0A0K0K1E9 115 aa9.21□□□□□ -0.94
CCT4-201ENST00000394440 Q6Q795 121 aa9.21□□□□□ -0.94
CCT4-201ENST00000394440 SPRR1BP22528 89 aa9.19□□□□□ -0.94
CCT4-201ENST00000394440 FAM30AQ9NZY2 134 aa9.19□□□□□ -0.94
CCT4-201ENST00000394440 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
CCT4-201ENST00000394440 Q6JHZ5 121 aa9.18□□□□□ -0.94
CCT4-201ENST00000394440 Q6ZSA8 131 aa9.18□□□□□ -0.94
CCT4-201ENST00000394440 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
CCT4-201ENST00000394440 KRTAP10-1P60331 282 aa9.15□□□□□ -0.94
CCT4-201ENST00000394440 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.94
CCT4-201ENST00000394440 C1orf137Q5JT78 98 aa9.15□□□□□ -0.94
CCT4-201ENST00000394440 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
CCT4-201ENST00000394440 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
CCT4-201ENST00000394440 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
CCT4-201ENST00000394440 A0A1W2PNM2 257 aa9.13□□□□□ -0.95
CCT4-201ENST00000394440 Q6ZVQ6 151 aa9.12□□□□□ -0.95
CCT4-201ENST00000394440 F8WEM9 126 aa9.12□□□□□ -0.95
CCT4-201ENST00000394440 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
CCT4-201ENST00000394440 ATP5EP2Q5VTU8 51 aa9.11□□□□□ -0.95
CCT4-201ENST00000394440 Q8NBF4 154 aa9.11□□□□□ -0.95
CCT4-201ENST00000394440 IGKV3D-7A0A0C4DH55 119 aa9.11□□□□□ -0.95
CCT4-201ENST00000394440 A0A1B0GW54 56 aa9.1□□□□□ -0.95
CCT4-201ENST00000394440 ZNF861PO60384 105 aa9.09□□□□□ -0.95
CCT4-201ENST00000394440 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
CCT4-201ENST00000394440 IGFL1Q6UW32 110 aa9.09□□□□□ -0.95
CCT4-201ENST00000394440 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
CCT4-201ENST00000394440 LINC00483Q53H64 154 aa9.07□□□□□ -0.96
CCT4-201ENST00000394440 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
CCT4-201ENST00000394440 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
CCT4-201ENST00000394440 CRYGAP11844 174 aa9.05□□□□□ -0.96
CCT4-201ENST00000394440 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
CCT4-201ENST00000394440 HAMPP81172 84 aa9.04□□□□□ -0.96
CCT4-201ENST00000394440 LRP1BQ9NZR2 4599 aa9.04□□□□□ -0.96
CCT4-201ENST00000394440 CXCL6P80162 114 aa9.03□□□□□ -0.96
CCT4-201ENST00000394440 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
CCT4-201ENST00000394440 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
CCT4-201ENST00000394440 V9GYY9 64 aa9.03□□□□□ -0.96
CCT4-201ENST00000394440 FAM236AA0A1B0GUQ0 79 aa9.02□□□□□ -0.96
CCT4-201ENST00000394440 FAM236BA0A1B0GV22 79 aa9.02□□□□□ -0.96
CCT4-201ENST00000394440 HIST1H4AP62805 103 aaKnown RBP9.01□□□□□ -0.97
CCT4-201ENST00000394440 A0A087WVE0 104 aa9.01□□□□□ -0.97
CCT4-201ENST00000394440 NREPQ16612 68 aa9.01□□□□□ -0.97
CCT4-201ENST00000394440 HRCT1Q6UXD1 115 aa9.01□□□□□ -0.97
CCT4-201ENST00000394440 C4orf26Q17RF5 130 aa8.99□□□□□ -0.97
CCT4-201ENST00000394440 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
CCT4-201ENST00000394440 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
CCT4-201ENST00000394440 IGLV9-49A0A0B4J1Y8 123 aa8.95□□□□□ -0.98
CCT4-201ENST00000394440 J3KT08 172 aa8.95□□□□□ -0.98
CCT4-201ENST00000394440 ANAPC11Q9NYG5 84 aa8.95□□□□□ -0.98
CCT4-201ENST00000394440 A0A087WSZ3 146 aa8.94□□□□□ -0.98
CCT4-201ENST00000394440 BPY2O14599 106 aa8.93□□□□□ -0.98
CCT4-201ENST00000394440 C9orf153Q5TBE3 101 aa8.93□□□□□ -0.98
CCT4-201ENST00000394440 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
CCT4-201ENST00000394440 VPS13BQ7Z7G8 4022 aa8.92□□□□□ -0.98
CCT4-201ENST00000394440 MOBPQ13875 183 aa8.91□□□□□ -0.98
CCT4-201ENST00000394440 IGKV4-1P06312 121 aa8.9□□□□□ -0.98
CCT4-201ENST00000394440 HERC2O95714 4834 aa8.9□□□□□ -0.98
CCT4-201ENST00000394440 ATOX1O00244 68 aa8.89□□□□□ -0.99
CCT4-201ENST00000394440 Q8N9L7 120 aa8.89□□□□□ -0.99
CCT4-201ENST00000394440 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
CCT4-201ENST00000394440 FAM236DA0A1B0GTK5 79 aa8.88□□□□□ -0.99
CCT4-201ENST00000394440 FAM236CP0DP71 79 aa8.88□□□□□ -0.99
CCT4-201ENST00000394440 DSCR10P59022 87 aa8.88□□□□□ -0.99
CCT4-201ENST00000394440 APOBP04114 4563 aaKnown RBP8.87□□□□□ -0.99
CCT4-201ENST00000394440 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
CCT4-201ENST00000394440 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
CCT4-201ENST00000394440 Q5XG85 94 aa8.84□□□□□ -0.99
CCT4-201ENST00000394440 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
CCT4-201ENST00000394440 A0A087X002 238 aa8.82□□□□□ -1
CCT4-201ENST00000394440 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
CCT4-201ENST00000394440 K7EQZ3 153 aa8.82□□□□□ -1
CCT4-201ENST00000394440 OXTP01178 125 aa8.82□□□□□ -1
CCT4-201ENST00000394440 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
CCT4-201ENST00000394440 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CCT4-201ENST00000394440 C1orf195Q5TG92 126 aa8.81□□□□□ -1
CCT4-201ENST00000394440 KRTAP17-1Q9BYP8 105 aa8.81□□□□□ -1
CCT4-201ENST00000394440 KRTAP13-2Q52LG2 175 aa8.8□□□□□ -1
CCT4-201ENST00000394440 Q96NJ1 140 aa8.8□□□□□ -1
CCT4-201ENST00000394440 COX7CP15954 63 aa8.79□□□□□ -1
CCT4-201ENST00000394440 SERP2Q8N6R1 65 aa8.79□□□□□ -1
CCT4-201ENST00000394440 A0A0U1RQV1 116 aa8.78□□□□□ -1
CCT4-201ENST00000394440 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
CCT4-201ENST00000394440 CD164Q04900 197 aa8.78□□□□□ -1
CCT4-201ENST00000394440 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
CCT4-201ENST00000394440 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
CCT4-201ENST00000394440 UQCRQO14949 82 aa8.77□□□□□ -1.01
CCT4-201ENST00000394440 FAT1Q14517 4588 aa8.75□□□□□ -1.01
CCT4-201ENST00000394440 RPS28P62857 69 aaKnown RBP8.75□□□□□ -1.01
CCT4-201ENST00000394440 A8MWP4 228 aa8.74□□□□□ -1.01
CCT4-201ENST00000394440 PCLOQ9Y6V0 5065 aa8.72□□□□□ -1.01
CCT4-201ENST00000394440 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
CCT4-201ENST00000394440 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
CCT4-201ENST00000394440 HCG22E2RYF7 251 aa8.71□□□□□ -1.02
CCT4-201ENST00000394440 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.02
CCT4-201ENST00000394440 OCR1Q9BZK8 76 aa8.69□□□□□ -1.02
CCT4-201ENST00000394440 RYR1P21817 5038 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms