RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 LIMD2Q9BT23 127 aa9.95□□□□□ -0.82
PDLIM7-205ENST00000393551 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
PDLIM7-205ENST00000393551 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
PDLIM7-205ENST00000393551 SNHG12Q9BXW3 62 aa9.93□□□□□ -0.82
PDLIM7-205ENST00000393551 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
PDLIM7-205ENST00000393551 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
PDLIM7-205ENST00000393551 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
PDLIM7-205ENST00000393551 CD164Q04900 197 aa9.91□□□□□ -0.82
PDLIM7-205ENST00000393551 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
PDLIM7-205ENST00000393551 A0A1B0GWB2 263 aa9.9□□□□□ -0.82
PDLIM7-205ENST00000393551 H7C2G1 150 aa9.9□□□□□ -0.82
PDLIM7-205ENST00000393551 FXYD2P54710 66 aa9.9□□□□□ -0.82
PDLIM7-205ENST00000393551 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
PDLIM7-205ENST00000393551 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
PDLIM7-205ENST00000393551 BATFQ16520 125 aa9.89□□□□□ -0.83
PDLIM7-205ENST00000393551 A4D1N5 150 aa9.88□□□□□ -0.83
PDLIM7-205ENST00000393551 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
PDLIM7-205ENST00000393551 Q5XG85 94 aa9.86□□□□□ -0.83
PDLIM7-205ENST00000393551 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
PDLIM7-205ENST00000393551 C1orf195Q5TG92 126 aa9.85□□□□□ -0.83
PDLIM7-205ENST00000393551 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
PDLIM7-205ENST00000393551 IGLV8-61A0A075B6I0 122 aa9.84□□□□□ -0.83
PDLIM7-205ENST00000393551 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
PDLIM7-205ENST00000393551 CFC1P0CG37 223 aa9.84□□□□□ -0.83
PDLIM7-205ENST00000393551 SMIM11BQ8TCY0 68 aa9.84□□□□□ -0.83
PDLIM7-205ENST00000393551 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
PDLIM7-205ENST00000393551 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
PDLIM7-205ENST00000393551 TRAV13-2A0A0B4J235 113 aa9.82□□□□□ -0.84
PDLIM7-205ENST00000393551 MT1HP80294 61 aa9.82□□□□□ -0.84
PDLIM7-205ENST00000393551 FSIP2Q5CZC0 6907 aa9.79□□□□□ -0.84
PDLIM7-205ENST00000393551 TAX1BP3O14907 124 aa9.78□□□□□ -0.84
PDLIM7-205ENST00000393551 C9orf118A6NHY6 69 aa9.76□□□□□ -0.85
PDLIM7-205ENST00000393551 K7ERJ3 54 aa9.74□□□□□ -0.85
PDLIM7-205ENST00000393551 FLGP20930 4061 aaPredicted RBP9.74□□□□□ -0.85
PDLIM7-205ENST00000393551 RPL37P61927 97 aaKnown RBP9.73□□□□□ -0.85
PDLIM7-205ENST00000393551 LYRM7Q5U5X0 104 aa9.73□□□□□ -0.85
PDLIM7-205ENST00000393551 LINC00575Q6W349 94 aa9.73□□□□□ -0.85
PDLIM7-205ENST00000393551 COX6CP09669 75 aa9.71□□□□□ -0.86
PDLIM7-205ENST00000393551 H3BUT2 72 aa9.69□□□□□ -0.86
PDLIM7-205ENST00000393551 Q6ZQY7 126 aa9.69□□□□□ -0.86
PDLIM7-205ENST00000393551 A0A1W2PPM0 123 aa9.68□□□□□ -0.86
PDLIM7-205ENST00000393551 FABP2P12104 132 aa9.68□□□□□ -0.86
PDLIM7-205ENST00000393551 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
PDLIM7-205ENST00000393551 TCL1BO95988 128 aa9.67□□□□□ -0.86
PDLIM7-205ENST00000393551 PSMB2P49721 201 aa9.67□□□□□ -0.86
PDLIM7-205ENST00000393551 VAMP3Q15836 100 aa9.67□□□□□ -0.86
PDLIM7-205ENST00000393551 LORP23490 312 aaPredicted RBP9.66□□□□□ -0.86
PDLIM7-205ENST00000393551 IGFL1Q6UW32 110 aa9.66□□□□□ -0.86
PDLIM7-205ENST00000393551 CRCT1Q9UGL9 99 aa9.66□□□□□ -0.86
PDLIM7-205ENST00000393551 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
PDLIM7-205ENST00000393551 F8WEM9 126 aa9.65□□□□□ -0.86
PDLIM7-205ENST00000393551 H0YGX0 51 aa9.64□□□□□ -0.87
PDLIM7-205ENST00000393551 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
PDLIM7-205ENST00000393551 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
PDLIM7-205ENST00000393551 TRBV7-7A0A0K0K1E9 115 aa9.63□□□□□ -0.87
PDLIM7-205ENST00000393551 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
PDLIM7-205ENST00000393551 TRIAP1O43715 76 aa9.62□□□□□ -0.87
PDLIM7-205ENST00000393551 OCIAD2Q56VL3 154 aa9.62□□□□□ -0.87
PDLIM7-205ENST00000393551 Q6JHZ5 121 aa9.62□□□□□ -0.87
PDLIM7-205ENST00000393551 GTF2H5Q6ZYL4 71 aa9.62□□□□□ -0.87
PDLIM7-205ENST00000393551 A0A1B0GV90 55 aa9.6□□□□□ -0.87
PDLIM7-205ENST00000393551 A0A1B0GX51 115 aa9.59□□□□□ -0.87
PDLIM7-205ENST00000393551 SNCGO76070 127 aa9.59□□□□□ -0.87
PDLIM7-205ENST00000393551 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.59□□□□□ -0.87
PDLIM7-205ENST00000393551 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
PDLIM7-205ENST00000393551 SPCS1Q9Y6A9 102 aa9.59□□□□□ -0.87
PDLIM7-205ENST00000393551 K7EP34 96 aa9.57□□□□□ -0.88
PDLIM7-205ENST00000393551 ATXN8Q156A1 80 aa9.57□□□□□ -0.88
PDLIM7-205ENST00000393551 LST1O00453 97 aa9.54□□□□□ -0.88
PDLIM7-205ENST00000393551 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
PDLIM7-205ENST00000393551 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
PDLIM7-205ENST00000393551 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
PDLIM7-205ENST00000393551 TRACP01848 142 aa9.53□□□□□ -0.88
PDLIM7-205ENST00000393551 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
PDLIM7-205ENST00000393551 M0R2T5 61 aa9.51□□□□□ -0.89
PDLIM7-205ENST00000393551 Q75L30 129 aa9.51□□□□□ -0.89
PDLIM7-205ENST00000393551 H3BQ85 93 aa9.49□□□□□ -0.89
PDLIM7-205ENST00000393551 GHRHP01286 108 aa9.49□□□□□ -0.89
PDLIM7-205ENST00000393551 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
PDLIM7-205ENST00000393551 H3BMG7 143 aa9.48□□□□□ -0.89
PDLIM7-205ENST00000393551 F8W1H4 67 aa9.47□□□□□ -0.89
PDLIM7-205ENST00000393551 DNAL4O96015 105 aa9.47□□□□□ -0.89
PDLIM7-205ENST00000393551 Q6Q795 121 aa9.46□□□□□ -0.9
PDLIM7-205ENST00000393551 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.9
PDLIM7-205ENST00000393551 H3BT86 120 aa9.43□□□□□ -0.9
PDLIM7-205ENST00000393551 Q96NJ1 140 aa9.43□□□□□ -0.9
PDLIM7-205ENST00000393551 C9JAW5 83 aa9.42□□□□□ -0.9
PDLIM7-205ENST00000393551 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-205ENST00000393551 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
PDLIM7-205ENST00000393551 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
PDLIM7-205ENST00000393551 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.9
PDLIM7-205ENST00000393551 ORMDL1Q9P0S3 153 aa9.4□□□□□ -0.9
PDLIM7-205ENST00000393551 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
PDLIM7-205ENST00000393551 BAALC-AS2P0C853 105 aa9.39□□□□□ -0.91
PDLIM7-205ENST00000393551 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
PDLIM7-205ENST00000393551 A0A087WSZ3 146 aa9.38□□□□□ -0.91
PDLIM7-205ENST00000393551 A8MUU9 505 aa9.38□□□□□ -0.91
PDLIM7-205ENST00000393551 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
PDLIM7-205ENST00000393551 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
PDLIM7-205ENST00000393551 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms